RNA–Protein interactions for RNA: ENST00000415482.6

PTPN12-203, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5 BASIC

Gene PTPN12, Length 2,316 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-203ENST00000415482 PTPRMP28827 1452 aa13.94□□□□□ -0.18
PTPN12-203ENST00000415482 NLRP1Q9C000 1473 aa13.93□□□□□ -0.18
PTPN12-203ENST00000415482 NRXN1Q9ULB1 1477 aa13.93□□□□□ -0.18
PTPN12-203ENST00000415482 NBPF1Q3BBV0 1214 aa13.93□□□□□ -0.18
PTPN12-203ENST00000415482 MYO3AQ8NEV4 1616 aa13.92□□□□□ -0.18
PTPN12-203ENST00000415482 STAC3Q96MF2 364 aa13.92□□□□□ -0.18
PTPN12-203ENST00000415482 HIRIP3Q9BW71 556 aaPredicted RBP13.92□□□□□ -0.18
PTPN12-203ENST00000415482 ZNF316A6NFI3 1004 aaPredicted RBP13.91□□□□□ -0.18
PTPN12-203ENST00000415482 KDM5AP29375 1690 aaKnown RBP13.91□□□□□ -0.18
PTPN12-203ENST00000415482 ROCK2O75116 1388 aaKnown RBP13.9□□□□□ -0.18
PTPN12-203ENST00000415482 KDM4FA0A1W2PPD8 638 aa13.9□□□□□ -0.18
PTPN12-203ENST00000415482 SENP3Q9H4L4 574 aaPredicted RBP13.9□□□□□ -0.18
PTPN12-203ENST00000415482 RIMS2Q9UQ26 1411 aa13.9□□□□□ -0.18
PTPN12-203ENST00000415482 PIK3C2GO75747 1445 aa13.89□□□□□ -0.19
PTPN12-203ENST00000415482 ZFYVE9O95405 1425 aa13.89□□□□□ -0.19
PTPN12-203ENST00000415482 VGFO15240 615 aaPredicted RBP13.89□□□□□ -0.19
PTPN12-203ENST00000415482 HSPA5P11021 654 aaKnown RBP13.89□□□□□ -0.19
PTPN12-203ENST00000415482 CFAP70Q5T0N1 1121 aa13.89□□□□□ -0.19
PTPN12-203ENST00000415482 CARD11Q9BXL7 1154 aa13.88□□□□□ -0.19
PTPN12-203ENST00000415482 SETD1BQ9UPS6 1966 aaKnown RBP13.88□□□□□ -0.19
PTPN12-203ENST00000415482 GPRASP1Q5JY77 1395 aa13.88□□□□□ -0.19
PTPN12-203ENST00000415482 KIAA1210Q9ULL0 1709 aa13.87□□□□□ -0.19
PTPN12-203ENST00000415482 CEP170BQ9Y4F5 1589 aaPredicted RBP13.87□□□□□ -0.19
PTPN12-203ENST00000415482 TMEM2Q9UHN6 1383 aa13.87□□□□□ -0.19
PTPN12-203ENST00000415482 EIF4G2P78344 907 aaKnown RBP eCLIP13.86□□□□□ -0.19
PTPN12-203ENST00000415482 USP47Q96K76 1375 aa13.86□□□□□ -0.19
PTPN12-203ENST00000415482 C14orf93Q9H972 538 aaKnown RBP13.85□□□□□ -0.19
PTPN12-203ENST00000415482 LAMC1P11047 1609 aa13.85□□□□□ -0.19
PTPN12-203ENST00000415482 ZNF142P52746 1687 aaPredicted RBP13.85□□□□□ -0.19
PTPN12-203ENST00000415482 LTKP29376 864 aa13.84□□□□□ -0.19
PTPN12-203ENST00000415482 SLIT1O75093 1534 aa13.83□□□□□ -0.2
PTPN12-203ENST00000415482 ARHGAP23Q9P227 1491 aa13.83□□□□□ -0.2
PTPN12-203ENST00000415482 THEMISQ8N1K5 641 aaPredicted RBP13.82□□□□□ -0.2
PTPN12-203ENST00000415482 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.82□□□□□ -0.2
PTPN12-203ENST00000415482 ADGRB1O14514 1584 aa13.82□□□□□ -0.2
PTPN12-203ENST00000415482 TMEM132EQ6IEE7 984 aa13.82□□□□□ -0.2
PTPN12-203ENST00000415482 IQGAP1P46940 1657 aa13.82□□□□□ -0.2
PTPN12-203ENST00000415482 NRXN3Q9Y4C0 1643 aa13.82□□□□□ -0.2
PTPN12-203ENST00000415482 ALKQ9UM73 1620 aa13.81□□□□□ -0.2
PTPN12-203ENST00000415482 SETBP1Q9Y6X0 1596 aa13.81□□□□□ -0.2
PTPN12-203ENST00000415482 ASXL1Q8IXJ9 1541 aa13.81□□□□□ -0.2
PTPN12-203ENST00000415482 TXNDC2Q86VQ3 553 aa13.8□□□□□ -0.2
PTPN12-203ENST00000415482 ST20-MTHFSA0A0A6YYL1 179 aa13.8□□□□□ -0.2
PTPN12-203ENST00000415482 SETD1AO15047 1707 aaKnown RBP13.79□□□□□ -0.2
PTPN12-203ENST00000415482 HDGFP51858 240 aaKnown RBP13.79□□□□□ -0.2
PTPN12-203ENST00000415482 SCAF11Q99590 1463 aaKnown RBP13.79□□□□□ -0.2
PTPN12-203ENST00000415482 C11orf95C9JLR9 678 aaPredicted RBP13.78□□□□□ -0.2
PTPN12-203ENST00000415482 EID1Q9Y6B2 187 aa13.78□□□□□ -0.2
PTPN12-203ENST00000415482 PLEKHG1Q9ULL1 1385 aa13.77□□□□□ -0.21
PTPN12-203ENST00000415482 AEBP2Q6ZN18 517 aaPredicted RBP13.76□□□□□ -0.21
PTPN12-203ENST00000415482 ADAMTS13Q76LX8 1427 aa13.76□□□□□ -0.21
PTPN12-203ENST00000415482 TRAK1Q9UPV9 953 aa13.75□□□□□ -0.21
PTPN12-203ENST00000415482 BCANQ96GW7 911 aa13.75□□□□□ -0.21
PTPN12-203ENST00000415482 METP08581 1390 aa13.74□□□□□ -0.21
PTPN12-203ENST00000415482 TESK2Q96S53 571 aa13.74□□□□□ -0.21
PTPN12-203ENST00000415482 WASHC2AQ641Q2 1341 aa13.74□□□□□ -0.21
PTPN12-203ENST00000415482 STK26Q9P289 416 aa13.74□□□□□ -0.21
PTPN12-203ENST00000415482 MED14O60244 1454 aa13.73□□□□□ -0.21
PTPN12-203ENST00000415482 YTHDC2Q9H6S0 1430 aaKnown RBP13.73□□□□□ -0.21
PTPN12-203ENST00000415482 ANKLE2Q86XL3 938 aa13.73□□□□□ -0.21
PTPN12-203ENST00000415482 SLC26A8Q96RN1 970 aa13.73□□□□□ -0.21
PTPN12-203ENST00000415482 ARHGEF28Q8N1W1 1705 aaKnown RBP13.72□□□□□ -0.21
PTPN12-203ENST00000415482 POLR1AO95602 1720 aaPredicted RBP13.72□□□□□ -0.21
PTPN12-203ENST00000415482 KIF7Q2M1P5 1343 aa13.71□□□□□ -0.21
PTPN12-203ENST00000415482 EIF3AQ14152 1382 aaKnown RBP13.71□□□□□ -0.21
PTPN12-203ENST00000415482 CCDC7Q96M83 1385 aa13.71□□□□□ -0.21
PTPN12-203ENST00000415482 HSPA2P54652 639 aa13.7□□□□□ -0.22
PTPN12-203ENST00000415482 NCKAP5LQ9HCH0 1330 aa13.7□□□□□ -0.22
PTPN12-203ENST00000415482 LRPPRCP42704 1394 aaKnown RBP13.7□□□□□ -0.22
PTPN12-203ENST00000415482 DISP3Q9P2K9 1392 aa13.7□□□□□ -0.22
PTPN12-203ENST00000415482 LMTK3Q96Q04 1460 aa13.69□□□□□ -0.22
PTPN12-203ENST00000415482 DDX10Q13206 875 aaKnown RBP13.69□□□□□ -0.22
PTPN12-203ENST00000415482 DIEXFQ68CQ4 756 aaKnown RBP13.69□□□□□ -0.22
PTPN12-203ENST00000415482 CENPJQ9HC77 1338 aaPredicted RBP13.69□□□□□ -0.22
PTPN12-203ENST00000415482 QRICH2Q9H0J4 1663 aa13.69□□□□□ -0.22
PTPN12-203ENST00000415482 TBX22Q9Y458 520 aa13.68□□□□□ -0.22
PTPN12-203ENST00000415482 PTPRUQ92729 1446 aa13.68□□□□□ -0.22
PTPN12-203ENST00000415482 DIP2AQ14689 1571 aa13.67□□□□□ -0.22
PTPN12-203ENST00000415482 SAFB2Q14151 953 aaKnown RBP eCLIP13.67□□□□□ -0.22
PTPN12-203ENST00000415482 NPHP4O75161 1426 aaPredicted RBP13.67□□□□□ -0.22
PTPN12-203ENST00000415482 ABCC11Q96J66 1382 aa13.67□□□□□ -0.22
PTPN12-203ENST00000415482 POLR3GLQ9BT43 218 aa13.67□□□□□ -0.22
PTPN12-203ENST00000415482 PRAM1Q96QH2 718 aa13.66□□□□□ -0.22
PTPN12-203ENST00000415482 DLC1Q96QB1 1528 aa13.66□□□□□ -0.22
PTPN12-203ENST00000415482 KNDC1Q76NI1 1749 aa13.66□□□□□ -0.22
PTPN12-203ENST00000415482 PLEKHH1Q9ULM0 1364 aa13.65□□□□□ -0.22
PTPN12-203ENST00000415482 TMF1P82094 1093 aa13.65□□□□□ -0.22
PTPN12-203ENST00000415482 WAPLQ7Z5K2 1190 aa13.65□□□□□ -0.22
PTPN12-203ENST00000415482 SBNO2Q9Y2G9 1366 aa13.64□□□□□ -0.23
PTPN12-203ENST00000415482 TECPR2O15040 1411 aa13.64□□□□□ -0.23
PTPN12-203ENST00000415482 CPS1P31327 1500 aa13.64□□□□□ -0.23
PTPN12-203ENST00000415482 ROBO2Q9HCK4 1378 aa13.63□□□□□ -0.23
PTPN12-203ENST00000415482 POGKQ9P215 609 aa13.63□□□□□ -0.23
PTPN12-203ENST00000415482 AMOTL2Q9Y2J4 779 aa13.63□□□□□ -0.23
PTPN12-203ENST00000415482 STRCQ7RTU9 1775 aa13.62□□□□□ -0.23
PTPN12-203ENST00000415482 MINK1Q8N4C8 1332 aaPredicted RBP13.62□□□□□ -0.23
PTPN12-203ENST00000415482 XRN1Q8IZH2 1706 aaKnown RBP13.62□□□□□ -0.23
PTPN12-203ENST00000415482 TULP4Q9NRJ4 1543 aa13.62□□□□□ -0.23
PTPN12-203ENST00000415482 CHD2O14647 1828 aaKnown RBP13.61□□□□□ -0.23
PTPN12-203ENST00000415482 FAM135BQ49AJ0 1406 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms