RNA–Protein interactions for RNA: ENST00000415356.1

AC007349.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC007349.3, Length 872 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007349.3-201ENST00000415356 VPS8Q8N3P4 1428 aa11.56□□□□□ -0.56
AC007349.3-201ENST00000415356 CHD2O14647 1828 aaKnown RBP11.56□□□□□ -0.56
AC007349.3-201ENST00000415356 STAG3Q9UJ98 1225 aa11.55□□□□□ -0.56
AC007349.3-201ENST00000415356 COL16A1Q07092 1604 aaPredicted RBP11.55□□□□□ -0.56
AC007349.3-201ENST00000415356 PTPN23Q9H3S7 1636 aa11.55□□□□□ -0.56
AC007349.3-201ENST00000415356 CHIC2Q9UKJ5 165 aa11.54□□□□□ -0.56
AC007349.3-201ENST00000415356 KDM5AP29375 1690 aaKnown RBP11.54□□□□□ -0.56
AC007349.3-201ENST00000415356 ADGRB3O60242 1522 aa11.54□□□□□ -0.56
AC007349.3-201ENST00000415356 ERBINQ96RT1 1412 aa11.53□□□□□ -0.56
AC007349.3-201ENST00000415356 NOS1P29475 1434 aa11.52□□□□□ -0.56
AC007349.3-201ENST00000415356 DAPK1P53355 1430 aa11.52□□□□□ -0.56
AC007349.3-201ENST00000415356 LMTK2Q8IWU2 1503 aa11.52□□□□□ -0.57
AC007349.3-201ENST00000415356 GCC2Q8IWJ2 1684 aa11.52□□□□□ -0.57
AC007349.3-201ENST00000415356 NKTRP30414 1462 aaKnown RBP11.51□□□□□ -0.57
AC007349.3-201ENST00000415356 TRIM52Q96A61 297 aa11.51□□□□□ -0.57
AC007349.3-201ENST00000415356 SLAIN2Q9P270 581 aa11.51□□□□□ -0.57
AC007349.3-201ENST00000415356 NUTM2DQ5VT03 806 aaPredicted RBP11.5□□□□□ -0.57
AC007349.3-201ENST00000415356 UPF1Q92900 1129 aaKnown RBP eCLIP11.5□□□□□ -0.57
AC007349.3-201ENST00000415356 MSH6P52701 1360 aa11.5□□□□□ -0.57
AC007349.3-201ENST00000415356 JCADQ9P266 1359 aa11.5□□□□□ -0.57
AC007349.3-201ENST00000415356 ZFYVE9O95405 1425 aa11.5□□□□□ -0.57
AC007349.3-201ENST00000415356 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.49□□□□□ -0.57
AC007349.3-201ENST00000415356 BCANQ96GW7 911 aa11.49□□□□□ -0.57
AC007349.3-201ENST00000415356 TMEM131LA2VDJ0 1609 aa11.47□□□□□ -0.57
AC007349.3-201ENST00000415356 RIMS2Q9UQ26 1411 aa11.47□□□□□ -0.57
AC007349.3-201ENST00000415356 KANK1Q14678 1352 aa11.47□□□□□ -0.57
AC007349.3-201ENST00000415356 FGD6Q6ZV73 1430 aa11.46□□□□□ -0.57
AC007349.3-201ENST00000415356 HOXD11P31277 338 aaPredicted RBP11.46□□□□□ -0.57
AC007349.3-201ENST00000415356 SHPRHQ149N8 1683 aa11.46□□□□□ -0.58
AC007349.3-201ENST00000415356 DIP2AQ14689 1571 aa11.45□□□□□ -0.58
AC007349.3-201ENST00000415356 ADAMTS13Q76LX8 1427 aa11.45□□□□□ -0.58
AC007349.3-201ENST00000415356 PLEKHG1Q9ULL1 1385 aa11.45□□□□□ -0.58
AC007349.3-201ENST00000415356 AHDC1Q5TGY3 1603 aaPredicted RBP11.45□□□□□ -0.58
AC007349.3-201ENST00000415356 PTPRUQ92729 1446 aa11.43□□□□□ -0.58
AC007349.3-201ENST00000415356 ANKRD30AQ9BXX3 1397 aa11.43□□□□□ -0.58
AC007349.3-201ENST00000415356 NUTM2BA6NNL0 878 aaPredicted RBP11.43□□□□□ -0.58
AC007349.3-201ENST00000415356 NUTM2EB1AL46 878 aaPredicted RBP11.43□□□□□ -0.58
AC007349.3-201ENST00000415356 MEX3CQ5U5Q3 659 aaKnown RBP11.43□□□□□ -0.58
AC007349.3-201ENST00000415356 NUTM2AQ8IVF1 878 aaPredicted RBP11.43□□□□□ -0.58
AC007349.3-201ENST00000415356 EP400Q96L91 3159 aa11.43□□□□□ -0.58
AC007349.3-201ENST00000415356 CHGAP10645 457 aaKnown RBP11.42□□□□□ -0.58
AC007349.3-201ENST00000415356 DDX17Q92841 729 aaKnown RBP11.42□□□□□ -0.58
AC007349.3-201ENST00000415356 SLC52A1Q9NWF4 448 aa11.42□□□□□ -0.58
AC007349.3-201ENST00000415356 E9PCH4 1651 aa11.42□□□□□ -0.58
AC007349.3-201ENST00000415356 ADGRL2O95490 1459 aa11.41□□□□□ -0.58
AC007349.3-201ENST00000415356 PPP1R15AO75807 674 aaPredicted RBP11.41□□□□□ -0.58
AC007349.3-201ENST00000415356 BRINP3Q76B58 766 aa11.41□□□□□ -0.58
AC007349.3-201ENST00000415356 C14orf37Q86TY3 774 aa11.41□□□□□ -0.58
AC007349.3-201ENST00000415356 TBX22Q9Y458 520 aa11.41□□□□□ -0.58
AC007349.3-201ENST00000415356 SPATA31A6Q5VVP1 1343 aa11.4□□□□□ -0.58
AC007349.3-201ENST00000415356 AFF2P51816 1311 aa11.39□□□□□ -0.59
AC007349.3-201ENST00000415356 NRXN3Q9Y4C0 1643 aa11.39□□□□□ -0.59
AC007349.3-201ENST00000415356 ZNF772Q68DY9 489 aaPredicted RBP11.39□□□□□ -0.59
AC007349.3-201ENST00000415356 ANKRD50Q9ULJ7 1429 aa11.39□□□□□ -0.59
AC007349.3-201ENST00000415356 UNC13BO14795 1591 aa11.38□□□□□ -0.59
AC007349.3-201ENST00000415356 RGS12O14924 1447 aa11.38□□□□□ -0.59
AC007349.3-201ENST00000415356 RXRBP28702 533 aa11.38□□□□□ -0.59
AC007349.3-201ENST00000415356 NHSL1Q5SYE7 1610 aa11.38□□□□□ -0.59
AC007349.3-201ENST00000415356 RPRD2Q5VT52 1461 aaKnown RBP11.38□□□□□ -0.59
AC007349.3-201ENST00000415356 ASXL1Q8IXJ9 1541 aa11.37□□□□□ -0.59
AC007349.3-201ENST00000415356 ATF3P18847 181 aa11.37□□□□□ -0.59
AC007349.3-201ENST00000415356 C19orf44Q9H6X5 657 aa11.37□□□□□ -0.59
AC007349.3-201ENST00000415356 AMOTL2Q9Y2J4 779 aa11.37□□□□□ -0.59
AC007349.3-201ENST00000415356 XRN1Q8IZH2 1706 aaKnown RBP11.37□□□□□ -0.59
AC007349.3-201ENST00000415356 NCOA3Q9Y6Q9 1424 aa11.36□□□□□ -0.59
AC007349.3-201ENST00000415356 FAM50AQ14320 339 aaKnown RBP11.36□□□□□ -0.59
AC007349.3-201ENST00000415356 CADPS2Q86UW7 1296 aa11.36□□□□□ -0.59
AC007349.3-201ENST00000415356 MST1RQ04912 1400 aa11.35□□□□□ -0.59
AC007349.3-201ENST00000415356 TRPM2O94759 1503 aa11.35□□□□□ -0.59
AC007349.3-201ENST00000415356 C8orf37Q96NL8 207 aa11.34□□□□□ -0.59
AC007349.3-201ENST00000415356 NALCNQ8IZF0 1738 aa11.34□□□□□ -0.59
AC007349.3-201ENST00000415356 SETD5Q9C0A6 1442 aa11.34□□□□□ -0.59
AC007349.3-201ENST00000415356 CDK12Q9NYV4 1490 aaPredicted RBP11.33□□□□□ -0.6
AC007349.3-201ENST00000415356 METP08581 1390 aa11.33□□□□□ -0.6
AC007349.3-201ENST00000415356 IQGAP3Q86VI3 1631 aa11.32□□□□□ -0.6
AC007349.3-201ENST00000415356 PNPLA6Q8IY17 1366 aa11.32□□□□□ -0.6
AC007349.3-201ENST00000415356 PIK3R4Q99570 1358 aa11.32□□□□□ -0.6
AC007349.3-201ENST00000415356 QTRT2Q9H974 415 aaKnown RBP11.32□□□□□ -0.6
AC007349.3-201ENST00000415356 ADAMTS2O95450 1211 aa11.31□□□□□ -0.6
AC007349.3-201ENST00000415356 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.31□□□□□ -0.6
AC007349.3-201ENST00000415356 HDGFP51858 240 aaKnown RBP11.3□□□□□ -0.6
AC007349.3-201ENST00000415356 APLP2Q06481 763 aa11.3□□□□□ -0.6
AC007349.3-201ENST00000415356 SETBP1Q9Y6X0 1596 aa11.29□□□□□ -0.6
AC007349.3-201ENST00000415356 DCCP43146 1447 aa11.28□□□□□ -0.6
AC007349.3-201ENST00000415356 RBM6P78332 1123 aaKnown RBP11.28□□□□□ -0.6
AC007349.3-201ENST00000415356 SPHKAPQ2M3C7 1700 aa11.28□□□□□ -0.6
AC007349.3-201ENST00000415356 LRRC59Q96AG4 307 aaKnown RBP11.27□□□□□ -0.61
AC007349.3-201ENST00000415356 NUP155O75694 1391 aa11.27□□□□□ -0.61
AC007349.3-201ENST00000415356 ADGRL3Q9HAR2 1447 aa11.26□□□□□ -0.61
AC007349.3-201ENST00000415356 C1orf167Q5SNV9 1468 aa11.26□□□□□ -0.61
AC007349.3-201ENST00000415356 SP7Q8TDD2 431 aaPredicted RBP11.26□□□□□ -0.61
AC007349.3-201ENST00000415356 ORAI2Q96SN7 254 aa11.26□□□□□ -0.61
AC007349.3-201ENST00000415356 CLTCL1P53675 1640 aa11.26□□□□□ -0.61
AC007349.3-201ENST00000415356 NEXMIFQ5QGS0 1516 aa11.25□□□□□ -0.61
AC007349.3-201ENST00000415356 NGLY1Q96IV0 654 aa11.25□□□□□ -0.61
AC007349.3-201ENST00000415356 PLSCR2Q9NRY7 297 aa11.25□□□□□ -0.61
AC007349.3-201ENST00000415356 LAMC1P11047 1609 aa11.24□□□□□ -0.61
AC007349.3-201ENST00000415356 ITGAEP38570 1179 aa11.24□□□□□ -0.61
AC007349.3-201ENST00000415356 ZNF326Q5BKZ1 582 aaKnown RBP11.24□□□□□ -0.61
AC007349.3-201ENST00000415356 USP21Q9UK80 565 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms