RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 ABCC3O15438 1527 aa17.62■□□□□ 0.41
LITAF-203ENST00000413364 DISP3Q9P2K9 1392 aa17.62■□□□□ 0.41
LITAF-203ENST00000413364 NPATQ14207 1427 aa17.62■□□□□ 0.41
LITAF-203ENST00000413364 PKNOX2Q96KN3 472 aa17.61■□□□□ 0.41
LITAF-203ENST00000413364 KIAA1210Q9ULL0 1709 aa17.61■□□□□ 0.41
LITAF-203ENST00000413364 FAM9BQ8IZU0 186 aa17.61■□□□□ 0.41
LITAF-203ENST00000413364 TMF1P82094 1093 aa17.6■□□□□ 0.41
LITAF-203ENST00000413364 SCAF11Q99590 1463 aaKnown RBP17.6■□□□□ 0.41
LITAF-203ENST00000413364 WASHC2CQ9Y4E1 1318 aa17.59■□□□□ 0.41
LITAF-203ENST00000413364 ADGRB3O60242 1522 aa17.59■□□□□ 0.41
LITAF-203ENST00000413364 DIP2BQ9P265 1576 aa17.58■□□□□ 0.4
LITAF-203ENST00000413364 MROH2AA6NES4 1674 aa17.58■□□□□ 0.4
LITAF-203ENST00000413364 IFT172Q9UG01 1749 aa17.58■□□□□ 0.4
LITAF-203ENST00000413364 RALBP1Q15311 655 aa17.58■□□□□ 0.4
LITAF-203ENST00000413364 CCDC136Q96JN2 1154 aa17.58■□□□□ 0.4
LITAF-203ENST00000413364 CNGB1Q14028 1251 aaPredicted RBP17.57■□□□□ 0.4
LITAF-203ENST00000413364 FAM69CQ0P6D2 419 aa17.56■□□□□ 0.4
LITAF-203ENST00000413364 CAMSAP1Q5T5Y3 1602 aa17.56■□□□□ 0.4
LITAF-203ENST00000413364 NRXN1Q9ULB1 1477 aa17.56■□□□□ 0.4
LITAF-203ENST00000413364 YEATS2Q9ULM3 1422 aa17.56■□□□□ 0.4
LITAF-203ENST00000413364 ADGRF5Q8IZF2 1346 aa17.54■□□□□ 0.4
LITAF-203ENST00000413364 MYBBP1AQ9BQG0 1328 aaKnown RBP17.54■□□□□ 0.4
LITAF-203ENST00000413364 ZMYM4Q5VZL5 1548 aa17.54■□□□□ 0.4
LITAF-203ENST00000413364 PER1O15534 1290 aaPredicted RBP17.54■□□□□ 0.4
LITAF-203ENST00000413364 EIF3AQ14152 1382 aaKnown RBP17.54■□□□□ 0.4
LITAF-203ENST00000413364 ZBED9Q6R2W3 1325 aa17.54■□□□□ 0.4
LITAF-203ENST00000413364 NOS1P29475 1434 aa17.54■□□□□ 0.4
LITAF-203ENST00000413364 BRD4O60885 1362 aaPredicted RBP17.53■□□□□ 0.4
LITAF-203ENST00000413364 ARHGAP31Q2M1Z3 1444 aa17.53■□□□□ 0.4
LITAF-203ENST00000413364 ZC3H13Q5T200 1668 aaKnown RBP17.52■□□□□ 0.4
LITAF-203ENST00000413364 PARD3Q8TEW0 1356 aa17.52■□□□□ 0.4
LITAF-203ENST00000413364 NEFLP07196 543 aa17.52■□□□□ 0.4
LITAF-203ENST00000413364 FKBP8Q14318 412 aa17.52■□□□□ 0.4
LITAF-203ENST00000413364 CFAP70Q5T0N1 1121 aa17.51■□□□□ 0.39
LITAF-203ENST00000413364 TMC1Q8TDI8 760 aa17.51■□□□□ 0.39
LITAF-203ENST00000413364 CDCA8Q53HL2 280 aa17.5■□□□□ 0.39
LITAF-203ENST00000413364 PNISRQ8TF01 805 aaKnown RBP17.5■□□□□ 0.39
LITAF-203ENST00000413364 PANK3Q9H999 370 aa17.5■□□□□ 0.39
LITAF-203ENST00000413364 SIGLEC1Q9BZZ2 1709 aa17.5■□□□□ 0.39
LITAF-203ENST00000413364 CHGAP10645 457 aaKnown RBP17.5■□□□□ 0.39
LITAF-203ENST00000413364 RPGRIP1LQ68CZ1 1315 aa17.49■□□□□ 0.39
LITAF-203ENST00000413364 PIK3C2BO00750 1634 aa17.49■□□□□ 0.39
LITAF-203ENST00000413364 PPLO60437 1756 aa17.49■□□□□ 0.39
LITAF-203ENST00000413364 CFAP65Q6ZU64 1925 aaKnown RBP17.49■□□□□ 0.39
LITAF-203ENST00000413364 SYNMO15061 1565 aa17.48■□□□□ 0.39
LITAF-203ENST00000413364 SETBP1Q9Y6X0 1596 aa17.47■□□□□ 0.39
LITAF-203ENST00000413364 NLRP13Q86W25 1043 aa17.46■□□□□ 0.39
LITAF-203ENST00000413364 LRPPRCP42704 1394 aaKnown RBP17.46■□□□□ 0.39
LITAF-203ENST00000413364 PIK3C2GO75747 1445 aa17.46■□□□□ 0.39
LITAF-203ENST00000413364 TSPOAP1O95153 1857 aa17.45■□□□□ 0.38
LITAF-203ENST00000413364 BCANQ96GW7 911 aa17.45■□□□□ 0.38
LITAF-203ENST00000413364 DNAJC5Q9H3Z4 198 aa17.44■□□□□ 0.38
LITAF-203ENST00000413364 REREQ9P2R6 1566 aa17.44■□□□□ 0.38
LITAF-203ENST00000413364 MYO3AQ8NEV4 1616 aa17.43■□□□□ 0.38
LITAF-203ENST00000413364 C14orf93Q9H972 538 aaKnown RBP17.43■□□□□ 0.38
LITAF-203ENST00000413364 CC2D1BQ5T0F9 858 aaKnown RBP17.41■□□□□ 0.38
LITAF-203ENST00000413364 KDM5AP29375 1690 aaKnown RBP17.41■□□□□ 0.38
LITAF-203ENST00000413364 SBNO2Q9Y2G9 1366 aa17.41■□□□□ 0.38
LITAF-203ENST00000413364 SLC52A1Q9NWF4 448 aa17.41■□□□□ 0.38
LITAF-203ENST00000413364 AGLP35573 1532 aa17.41■□□□□ 0.38
LITAF-203ENST00000413364 PODXL2Q9NZ53 605 aa17.4■□□□□ 0.38
LITAF-203ENST00000413364 ERVK-7P63135 1459 aa17.4■□□□□ 0.38
LITAF-203ENST00000413364 MYOM1P52179 1685 aa17.4■□□□□ 0.38
LITAF-203ENST00000413364 ADGRB1O14514 1584 aa17.4■□□□□ 0.38
LITAF-203ENST00000413364 NEXMIFQ5QGS0 1516 aa17.4■□□□□ 0.38
LITAF-203ENST00000413364 PREX1Q8TCU6 1659 aa17.39■□□□□ 0.37
LITAF-203ENST00000413364 IDI1Q13907 227 aa17.38■□□□□ 0.37
LITAF-203ENST00000413364 KNSTRNQ9Y448 316 aa17.38■□□□□ 0.37
LITAF-203ENST00000413364 VGFO15240 615 aaPredicted RBP17.38■□□□□ 0.37
LITAF-203ENST00000413364 SMG6Q86US8 1419 aaKnown RBP17.38■□□□□ 0.37
LITAF-203ENST00000413364 PPP6R1Q9UPN7 881 aa17.37■□□□□ 0.37
LITAF-203ENST00000413364 CENPJQ9HC77 1338 aaPredicted RBP17.37■□□□□ 0.37
LITAF-203ENST00000413364 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.37■□□□□ 0.37
LITAF-203ENST00000413364 AMER1Q5JTC6 1135 aaPredicted RBP17.36■□□□□ 0.37
LITAF-203ENST00000413364 ZFYVE9O95405 1425 aa17.36■□□□□ 0.37
LITAF-203ENST00000413364 ASXL1Q8IXJ9 1541 aa17.36■□□□□ 0.37
LITAF-203ENST00000413364 NPC1L1Q9UHC9 1359 aa17.35■□□□□ 0.37
LITAF-203ENST00000413364 KIF13AQ9H1H9 1805 aa17.35■□□□□ 0.37
LITAF-203ENST00000413364 INSRP06213 1382 aa17.34■□□□□ 0.37
LITAF-203ENST00000413364 TRAK1Q9UPV9 953 aa17.33■□□□□ 0.37
LITAF-203ENST00000413364 TMEM131LA2VDJ0 1609 aa17.33■□□□□ 0.37
LITAF-203ENST00000413364 TMEM132EQ6IEE7 984 aa17.32■□□□□ 0.36
LITAF-203ENST00000413364 ARHGEF40Q8TER5 1519 aa17.32■□□□□ 0.36
LITAF-203ENST00000413364 PLEKHG5O94827 1062 aa17.32■□□□□ 0.36
LITAF-203ENST00000413364 NUDCQ9Y266 331 aa17.32■□□□□ 0.36
LITAF-203ENST00000413364 QRICH2Q9H0J4 1663 aa17.32■□□□□ 0.36
LITAF-203ENST00000413364 NUTM2DQ5VT03 806 aaPredicted RBP17.31■□□□□ 0.36
LITAF-203ENST00000413364 FBXO31Q5XUX0 539 aaPredicted RBP17.3■□□□□ 0.36
LITAF-203ENST00000413364 MYO5BQ9ULV0 1848 aa17.29■□□□□ 0.36
LITAF-203ENST00000413364 PPP2R1AP30153 589 aa17.29■□□□□ 0.36
LITAF-203ENST00000413364 GLIPR1L2Q4G1C9 344 aa17.29■□□□□ 0.36
LITAF-203ENST00000413364 CLTCQ00610 1675 aaKnown RBP17.28■□□□□ 0.36
LITAF-203ENST00000413364 BLMP54132 1417 aaPredicted RBP17.28■□□□□ 0.36
LITAF-203ENST00000413364 IL27Q8NEV9 243 aa17.28■□□□□ 0.36
LITAF-203ENST00000413364 IRX6P78412 446 aaPredicted RBP17.27■□□□□ 0.36
LITAF-203ENST00000413364 ARHGEF28Q8N1W1 1705 aaKnown RBP17.27■□□□□ 0.35
LITAF-203ENST00000413364 SPATA31D1Q6ZQQ2 1576 aa17.26■□□□□ 0.35
LITAF-203ENST00000413364 CARD14Q9BXL6 1004 aa17.26■□□□□ 0.35
LITAF-203ENST00000413364 SENP3-EIF4A1A0A087X0R7 540 aa17.25■□□□□ 0.35
LITAF-203ENST00000413364 PUS7Q96PZ0 661 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms