RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 PPP2R1AP30153 589 aa25.06■■□□□ 1.6
TNFRSF8-202ENST00000413146 ZFYVE16Q7Z3T8 1539 aa25.06■■□□□ 1.6
TNFRSF8-202ENST00000413146 CLTCL1P53675 1640 aa25.06■■□□□ 1.6
TNFRSF8-202ENST00000413146 SCAPERQ9BY12 1400 aa25.05■■□□□ 1.6
TNFRSF8-202ENST00000413146 RTEL1-TNFRSF6BF6WH68 1400 aa25.05■■□□□ 1.6
TNFRSF8-202ENST00000413146 STAC3Q96MF2 364 aa25.05■■□□□ 1.6
TNFRSF8-202ENST00000413146 BACH2Q9BYV9 841 aa25.04■■□□□ 1.6
TNFRSF8-202ENST00000413146 DEPDC5O75140 1603 aa25.04■■□□□ 1.6
TNFRSF8-202ENST00000413146 TET3O43151 1660 aa25.03■■□□□ 1.6
TNFRSF8-202ENST00000413146 ASXL1Q8IXJ9 1541 aa25.03■■□□□ 1.6
TNFRSF8-202ENST00000413146 PTPRTO14522 1441 aa25.03■■□□□ 1.6
TNFRSF8-202ENST00000413146 AMER1Q5JTC6 1135 aaPredicted RBP25.02■■□□□ 1.6
TNFRSF8-202ENST00000413146 RTL5Q5HYW3 569 aaPredicted RBP25.02■■□□□ 1.6
TNFRSF8-202ENST00000413146 ARAP3Q8WWN8 1544 aa25.01■■□□□ 1.59
TNFRSF8-202ENST00000413146 MYOM1P52179 1685 aa25.01■■□□□ 1.59
TNFRSF8-202ENST00000413146 EIF3AQ14152 1382 aaKnown RBP25■■□□□ 1.59
TNFRSF8-202ENST00000413146 PLEKHH1Q9ULM0 1364 aa24.99■■□□□ 1.59
TNFRSF8-202ENST00000413146 KIAA1210Q9ULL0 1709 aa24.99■■□□□ 1.59
TNFRSF8-202ENST00000413146 PIK3C2GO75747 1445 aa24.98■■□□□ 1.59
TNFRSF8-202ENST00000413146 KDM5AP29375 1690 aaKnown RBP24.98■■□□□ 1.59
TNFRSF8-202ENST00000413146 AFAP1Q8N556 730 aa24.98■■□□□ 1.59
TNFRSF8-202ENST00000413146 KANK1Q14678 1352 aa24.96■■□□□ 1.59
TNFRSF8-202ENST00000413146 DUSP27Q5VZP5 1158 aa24.95■■□□□ 1.59
TNFRSF8-202ENST00000413146 NPC1L1Q9UHC9 1359 aa24.94■■□□□ 1.58
TNFRSF8-202ENST00000413146 GOLGA2Q08379 1002 aa24.94■■□□□ 1.58
TNFRSF8-202ENST00000413146 C20orf194Q5TEA3 1177 aa24.94■■□□□ 1.58
TNFRSF8-202ENST00000413146 ZNF521Q96K83 1311 aa24.94■■□□□ 1.58
TNFRSF8-202ENST00000413146 ATP7AQ04656 1500 aa24.93■■□□□ 1.58
TNFRSF8-202ENST00000413146 INO80Q9ULG1 1556 aaPredicted RBP24.92■■□□□ 1.58
TNFRSF8-202ENST00000413146 VWDEQ8N2E2 1590 aa24.91■■□□□ 1.58
TNFRSF8-202ENST00000413146 NEURL4Q96JN8 1562 aa24.91■■□□□ 1.58
TNFRSF8-202ENST00000413146 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.9■■□□□ 1.58
TNFRSF8-202ENST00000413146 KDM2BQ8NHM5 1336 aa24.88■■□□□ 1.57
TNFRSF8-202ENST00000413146 MAP3K4Q9Y6R4 1608 aa24.88■■□□□ 1.57
TNFRSF8-202ENST00000413146 ABCA9Q8IUA7 1624 aa24.87■■□□□ 1.57
TNFRSF8-202ENST00000413146 CENPQQ7L2Z9 268 aaPredicted RBP24.87■■□□□ 1.57
TNFRSF8-202ENST00000413146 SKAP1Q86WV1 359 aa24.87■■□□□ 1.57
TNFRSF8-202ENST00000413146 ABCA6Q8N139 1617 aa24.86■■□□□ 1.57
TNFRSF8-202ENST00000413146 FANCAO15360 1455 aa24.86■■□□□ 1.57
TNFRSF8-202ENST00000413146 MYOM2P54296 1465 aa24.86■■□□□ 1.57
TNFRSF8-202ENST00000413146 KIF1BO60333 1816 aa24.85■■□□□ 1.57
TNFRSF8-202ENST00000413146 KIF3BO15066 747 aa24.85■■□□□ 1.57
TNFRSF8-202ENST00000413146 SLFN5Q08AF3 891 aa24.85■■□□□ 1.57
TNFRSF8-202ENST00000413146 DDRGK1Q96HY6 314 aa24.84■■□□□ 1.57
TNFRSF8-202ENST00000413146 CCDC146Q8IYE0 955 aa24.83■■□□□ 1.57
TNFRSF8-202ENST00000413146 ERVK-7P63135 1459 aa24.83■■□□□ 1.56
TNFRSF8-202ENST00000413146 UGGT1Q9NYU2 1555 aa24.81■■□□□ 1.56
TNFRSF8-202ENST00000413146 MROH1Q8NDA8 1641 aa24.81■■□□□ 1.56
TNFRSF8-202ENST00000413146 IFT172Q9UG01 1749 aa24.81■■□□□ 1.56
TNFRSF8-202ENST00000413146 CFAP70Q5T0N1 1121 aa24.81■■□□□ 1.56
TNFRSF8-202ENST00000413146 LAS1LQ9Y4W2 734 aaKnown RBP24.81■■□□□ 1.56
TNFRSF8-202ENST00000413146 NKTRP30414 1462 aaKnown RBP24.8■■□□□ 1.56
TNFRSF8-202ENST00000413146 ADGRL1O94910 1474 aa24.79■■□□□ 1.56
TNFRSF8-202ENST00000413146 TRMT2AQ8IZ69 625 aaKnown RBP24.79■■□□□ 1.56
TNFRSF8-202ENST00000413146 APAF1O14727 1248 aa24.78■■□□□ 1.56
TNFRSF8-202ENST00000413146 EFCAB6Q5THR3 1501 aa24.78■■□□□ 1.56
TNFRSF8-202ENST00000413146 ADGRF5Q8IZF2 1346 aa24.77■■□□□ 1.56
TNFRSF8-202ENST00000413146 PPM1GO15355 546 aaPredicted RBP24.77■■□□□ 1.56
TNFRSF8-202ENST00000413146 USP35Q9P2H5 1018 aa24.77■■□□□ 1.56
TNFRSF8-202ENST00000413146 NEFMP07197 916 aa24.76■■□□□ 1.55
TNFRSF8-202ENST00000413146 MROH2AA6NES4 1674 aa24.76■■□□□ 1.55
TNFRSF8-202ENST00000413146 MYO3AQ8NEV4 1616 aa24.76■■□□□ 1.55
TNFRSF8-202ENST00000413146 E9PSI1 815 aa24.74■■□□□ 1.55
TNFRSF8-202ENST00000413146 NGEFQ8N5V2 710 aa24.73■■□□□ 1.55
TNFRSF8-202ENST00000413146 SPINK5Q9NQ38 1064 aaPredicted RBP24.73■■□□□ 1.55
TNFRSF8-202ENST00000413146 PPRC1Q5VV67 1664 aaKnown RBP24.73■■□□□ 1.55
TNFRSF8-202ENST00000413146 FAM161AQ3B820 660 aa24.72■■□□□ 1.55
TNFRSF8-202ENST00000413146 CARD14Q9BXL6 1004 aa24.72■■□□□ 1.55
TNFRSF8-202ENST00000413146 SBNO2Q9Y2G9 1366 aa24.72■■□□□ 1.55
TNFRSF8-202ENST00000413146 NRXN1Q9ULB1 1477 aa24.71■■□□□ 1.55
TNFRSF8-202ENST00000413146 RIMBP3CA6NJZ7 1639 aa24.7■■□□□ 1.55
TNFRSF8-202ENST00000413146 RIMBP3BA6NNM3 1639 aa24.7■■□□□ 1.55
TNFRSF8-202ENST00000413146 RIMBP3Q9UFD9 1639 aa24.7■■□□□ 1.55
TNFRSF8-202ENST00000413146 ASXL2Q76L83 1435 aa24.7■■□□□ 1.54
TNFRSF8-202ENST00000413146 KIDINS220Q9ULH0 1771 aa24.68■■□□□ 1.54
TNFRSF8-202ENST00000413146 NPM1P06748 294 aaKnown RBP eCLIP24.68■■□□□ 1.54
TNFRSF8-202ENST00000413146 SETBP1Q9Y6X0 1596 aa24.68■■□□□ 1.54
TNFRSF8-202ENST00000413146 BCAR3O75815 825 aa24.67■■□□□ 1.54
TNFRSF8-202ENST00000413146 POLR3AO14802 1390 aaPredicted RBP24.67■■□□□ 1.54
TNFRSF8-202ENST00000413146 C8orf34Q49A92 452 aa24.67■■□□□ 1.54
TNFRSF8-202ENST00000413146 ADGRB3O60242 1522 aa24.66■■□□□ 1.54
TNFRSF8-202ENST00000413146 LMTK2Q8IWU2 1503 aa24.66■■□□□ 1.54
TNFRSF8-202ENST00000413146 CENPJQ9HC77 1338 aaPredicted RBP24.66■■□□□ 1.54
TNFRSF8-202ENST00000413146 DAXXQ9UER7 740 aaPredicted RBP24.65■■□□□ 1.54
TNFRSF8-202ENST00000413146 NOS1P29475 1434 aa24.65■■□□□ 1.54
TNFRSF8-202ENST00000413146 RGS3P49796 1198 aa24.65■■□□□ 1.54
TNFRSF8-202ENST00000413146 ZC3H13Q5T200 1668 aaKnown RBP24.64■■□□□ 1.53
TNFRSF8-202ENST00000413146 NINLQ9Y2I6 1382 aa24.63■■□□□ 1.53
TNFRSF8-202ENST00000413146 DMRT2Q9Y5R5 561 aa24.62■■□□□ 1.53
TNFRSF8-202ENST00000413146 QRICH2Q9H0J4 1663 aa24.62■■□□□ 1.53
TNFRSF8-202ENST00000413146 NSD3Q9BZ95 1437 aa24.62■■□□□ 1.53
TNFRSF8-202ENST00000413146 SHPRHQ149N8 1683 aa24.62■■□□□ 1.53
TNFRSF8-202ENST00000413146 CHGAP10645 457 aaKnown RBP24.61■■□□□ 1.53
TNFRSF8-202ENST00000413146 PPLO60437 1756 aa24.61■■□□□ 1.53
TNFRSF8-202ENST00000413146 CGNL1Q0VF96 1302 aa24.6■■□□□ 1.53
TNFRSF8-202ENST00000413146 ZNF518AQ6AHZ1 1483 aa24.6■■□□□ 1.53
TNFRSF8-202ENST00000413146 PDE3AQ14432 1141 aa24.59■■□□□ 1.53
TNFRSF8-202ENST00000413146 MORC1Q86VD1 984 aa24.59■■□□□ 1.53
TNFRSF8-202ENST00000413146 WWC1Q8IX03 1113 aa24.59■■□□□ 1.53
TNFRSF8-202ENST00000413146 VIRMAQ69YN4 1812 aaKnown RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms