RNA–Protein interactions for RNA: ENST00000409986.5

LOXL3-205, Transcript of lysyl oxidase like 3, humanhuman

TSL 2 BASIC

Gene LOXL3, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOXL3-205ENST00000409986 KIF1BO60333 1816 aa24.03■■□□□ 1.44
LOXL3-205ENST00000409986 MROH2AA6NES4 1674 aa24.03■■□□□ 1.44
LOXL3-205ENST00000409986 IRX6P78412 446 aaPredicted RBP24.01■■□□□ 1.43
LOXL3-205ENST00000409986 STAC3Q96MF2 364 aa24.01■■□□□ 1.43
LOXL3-205ENST00000409986 LAMC1P11047 1609 aa24■■□□□ 1.43
LOXL3-205ENST00000409986 ADGRB3O60242 1522 aa24■■□□□ 1.43
LOXL3-205ENST00000409986 ARHGEF40Q8TER5 1519 aa24■■□□□ 1.43
LOXL3-205ENST00000409986 SYNMO15061 1565 aa23.99■■□□□ 1.43
LOXL3-205ENST00000409986 ARID4BQ4LE39 1312 aaPredicted RBP23.98■■□□□ 1.43
LOXL3-205ENST00000409986 PPP4R2Q9NY27 417 aa23.97■■□□□ 1.43
LOXL3-205ENST00000409986 PIK3C2BO00750 1634 aa23.95■■□□□ 1.43
LOXL3-205ENST00000409986 IFT172Q9UG01 1749 aa23.95■■□□□ 1.43
LOXL3-205ENST00000409986 MYOM2P54296 1465 aa23.95■■□□□ 1.42
LOXL3-205ENST00000409986 ADGRF5Q8IZF2 1346 aa23.94■■□□□ 1.42
LOXL3-205ENST00000409986 CHGAP10645 457 aaKnown RBP23.93■■□□□ 1.42
LOXL3-205ENST00000409986 PPP6R1Q9UPN7 881 aa23.91■■□□□ 1.42
LOXL3-205ENST00000409986 NRXN1Q9ULB1 1477 aa23.9■■□□□ 1.42
LOXL3-205ENST00000409986 PREX1Q8TCU6 1659 aa23.9■■□□□ 1.42
LOXL3-205ENST00000409986 IDI1Q13907 227 aa23.89■■□□□ 1.41
LOXL3-205ENST00000409986 MLECQ14165 292 aa23.88■■□□□ 1.41
LOXL3-205ENST00000409986 FBXO31Q5XUX0 539 aaPredicted RBP23.88■■□□□ 1.41
LOXL3-205ENST00000409986 TESK2Q96S53 571 aa23.88■■□□□ 1.41
LOXL3-205ENST00000409986 POLR3GLQ9BT43 218 aa23.87■■□□□ 1.41
LOXL3-205ENST00000409986 KIAA1210Q9ULL0 1709 aa23.86■■□□□ 1.41
LOXL3-205ENST00000409986 CLTCQ00610 1675 aaKnown RBP23.86■■□□□ 1.41
LOXL3-205ENST00000409986 PPLO60437 1756 aa23.86■■□□□ 1.41
LOXL3-205ENST00000409986 CFAP70Q5T0N1 1121 aa23.86■■□□□ 1.41
LOXL3-205ENST00000409986 IQGAP1P46940 1657 aa23.85■■□□□ 1.41
LOXL3-205ENST00000409986 FANCIQ9NVI1 1328 aa23.85■■□□□ 1.41
LOXL3-205ENST00000409986 SMG6Q86US8 1419 aaKnown RBP23.85■■□□□ 1.41
LOXL3-205ENST00000409986 SLC52A1Q9NWF4 448 aa23.85■■□□□ 1.41
LOXL3-205ENST00000409986 TRHP20396 242 aaPredicted RBP23.84■■□□□ 1.41
LOXL3-205ENST00000409986 ERVK-7P63135 1459 aa23.84■■□□□ 1.41
LOXL3-205ENST00000409986 RPGRIP1LQ68CZ1 1315 aa23.83■■□□□ 1.41
LOXL3-205ENST00000409986 SCAF11Q99590 1463 aaKnown RBP23.82■■□□□ 1.4
LOXL3-205ENST00000409986 PIK3C2GO75747 1445 aa23.81■■□□□ 1.4
LOXL3-205ENST00000409986 DISP3Q9P2K9 1392 aa23.8■■□□□ 1.4
LOXL3-205ENST00000409986 NEXMIFQ5QGS0 1516 aa23.8■■□□□ 1.4
LOXL3-205ENST00000409986 MSH5O43196 834 aa23.79■■□□□ 1.4
LOXL3-205ENST00000409986 TMEM131LA2VDJ0 1609 aa23.78■■□□□ 1.4
LOXL3-205ENST00000409986 DNAJC5Q9H3Z4 198 aa23.77■■□□□ 1.4
LOXL3-205ENST00000409986 NUTM2DQ5VT03 806 aaPredicted RBP23.76■■□□□ 1.39
LOXL3-205ENST00000409986 SPATA31D1Q6ZQQ2 1576 aa23.76■■□□□ 1.39
LOXL3-205ENST00000409986 PNISRQ8TF01 805 aaKnown RBP23.76■■□□□ 1.39
LOXL3-205ENST00000409986 RNF123Q5XPI4 1314 aa23.76■■□□□ 1.39
LOXL3-205ENST00000409986 NUDCQ9Y266 331 aa23.76■■□□□ 1.39
LOXL3-205ENST00000409986 C14orf93Q9H972 538 aaKnown RBP23.75■■□□□ 1.39
LOXL3-205ENST00000409986 MYO5BQ9ULV0 1848 aa23.75■■□□□ 1.39
LOXL3-205ENST00000409986 B4GALNT3Q6L9W6 998 aa23.74■■□□□ 1.39
LOXL3-205ENST00000409986 ZMYM3Q14202 1370 aa23.73■■□□□ 1.39
LOXL3-205ENST00000409986 KTN1Q86UP2 1357 aaKnown RBP23.73■■□□□ 1.39
LOXL3-205ENST00000409986 TMF1P82094 1093 aa23.72■■□□□ 1.39
LOXL3-205ENST00000409986 SETBP1Q9Y6X0 1596 aa23.72■■□□□ 1.39
LOXL3-205ENST00000409986 VGFO15240 615 aaPredicted RBP23.72■■□□□ 1.39
LOXL3-205ENST00000409986 ADGRB1O14514 1584 aa23.71■■□□□ 1.39
LOXL3-205ENST00000409986 ZFYVE9O95405 1425 aa23.69■■□□□ 1.38
LOXL3-205ENST00000409986 LRPPRCP42704 1394 aaKnown RBP23.69■■□□□ 1.38
LOXL3-205ENST00000409986 EIF3AQ14152 1382 aaKnown RBP23.69■■□□□ 1.38
LOXL3-205ENST00000409986 CNGB1Q14028 1251 aaPredicted RBP23.69■■□□□ 1.38
LOXL3-205ENST00000409986 TMC1Q8TDI8 760 aa23.69■■□□□ 1.38
LOXL3-205ENST00000409986 ESF1Q9H501 851 aaKnown RBP23.69■■□□□ 1.38
LOXL3-205ENST00000409986 BRD4O60885 1362 aaPredicted RBP23.67■■□□□ 1.38
LOXL3-205ENST00000409986 RALBP1Q15311 655 aa23.67■■□□□ 1.38
LOXL3-205ENST00000409986 TMEM132EQ6IEE7 984 aa23.67■■□□□ 1.38
LOXL3-205ENST00000409986 MYBBP1AQ9BQG0 1328 aaKnown RBP23.65■■□□□ 1.38
LOXL3-205ENST00000409986 A2ML1A8K2U0 1454 aa23.64■■□□□ 1.38
LOXL3-205ENST00000409986 MYO3AQ8NEV4 1616 aa23.62■■□□□ 1.37
LOXL3-205ENST00000409986 STAG3Q9UJ98 1225 aa23.62■■□□□ 1.37
LOXL3-205ENST00000409986 PER1O15534 1290 aaPredicted RBP23.62■■□□□ 1.37
LOXL3-205ENST00000409986 TRAK1Q9UPV9 953 aa23.62■■□□□ 1.37
LOXL3-205ENST00000409986 SENP3Q9H4L4 574 aaPredicted RBP23.59■■□□□ 1.37
LOXL3-205ENST00000409986 PANK3Q9H999 370 aa23.58■■□□□ 1.37
LOXL3-205ENST00000409986 ASXL1Q8IXJ9 1541 aa23.57■■□□□ 1.36
LOXL3-205ENST00000409986 SBNO2Q9Y2G9 1366 aa23.57■■□□□ 1.36
LOXL3-205ENST00000409986 CENPJQ9HC77 1338 aaPredicted RBP23.57■■□□□ 1.36
LOXL3-205ENST00000409986 TNRQ92752 1358 aa23.56■■□□□ 1.36
LOXL3-205ENST00000409986 CDCA8Q53HL2 280 aa23.56■■□□□ 1.36
LOXL3-205ENST00000409986 PARD3Q8TEW0 1356 aa23.56■■□□□ 1.36
LOXL3-205ENST00000409986 RIMS2Q9UQ26 1411 aa23.54■■□□□ 1.36
LOXL3-205ENST00000409986 CEBPAP49715 358 aaPredicted RBP23.53■■□□□ 1.36
LOXL3-205ENST00000409986 SLC24A1O60721 1099 aa23.52■■□□□ 1.36
LOXL3-205ENST00000409986 MYOM1P52179 1685 aa23.52■■□□□ 1.36
LOXL3-205ENST00000409986 NLRP13Q86W25 1043 aa23.52■■□□□ 1.36
LOXL3-205ENST00000409986 ARHGEF28Q8N1W1 1705 aaKnown RBP23.51■■□□□ 1.35
LOXL3-205ENST00000409986 CCDC136Q96JN2 1154 aa23.51■■□□□ 1.35
LOXL3-205ENST00000409986 ALKQ9UM73 1620 aa23.51■■□□□ 1.35
LOXL3-205ENST00000409986 KDM5AP29375 1690 aaKnown RBP23.51■■□□□ 1.35
LOXL3-205ENST00000409986 QRICH2Q9H0J4 1663 aa23.51■■□□□ 1.35
LOXL3-205ENST00000409986 ERICH6Q7L0X2 663 aa23.49■■□□□ 1.35
LOXL3-205ENST00000409986 SENP3-EIF4A1A0A087X0R7 540 aa23.48■■□□□ 1.35
LOXL3-205ENST00000409986 C3P01024 1663 aa23.47■■□□□ 1.35
LOXL3-205ENST00000409986 FER1L4A9Z1Z3 1794 aa23.47■■□□□ 1.35
LOXL3-205ENST00000409986 PTPRMP28827 1452 aa23.46■■□□□ 1.35
LOXL3-205ENST00000409986 STK26Q9P289 416 aa23.46■■□□□ 1.35
LOXL3-205ENST00000409986 UBR1Q8IWV7 1749 aa23.46■■□□□ 1.35
LOXL3-205ENST00000409986 YTHDC2Q9H6S0 1430 aaKnown RBP23.45■■□□□ 1.34
LOXL3-205ENST00000409986 INSRP06213 1382 aa23.44■■□□□ 1.34
LOXL3-205ENST00000409986 PDE3BQ13370 1112 aa23.43■■□□□ 1.34
LOXL3-205ENST00000409986 CC2D1BQ5T0F9 858 aaKnown RBP23.43■■□□□ 1.34
LOXL3-205ENST00000409986 SETD1AO15047 1707 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms