RNA–Protein interactions for RNA: ENST00000409960.6

SERF2-210, Transcript of small EDRK-rich factor 2, humanhuman

TSL 1 (best) BASIC

Gene SERF2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-210ENST00000409960 POTEDQ86YR6 584 aa18.27■□□□□ 0.52
SERF2-210ENST00000409960 XIRP1Q702N8 1843 aaKnown RBP18.27■□□□□ 0.52
SERF2-210ENST00000409960 ADGRB3O60242 1522 aa18.26■□□□□ 0.51
SERF2-210ENST00000409960 KCNA6P17658 529 aa18.24■□□□□ 0.51
SERF2-210ENST00000409960 ANKRD50Q9ULJ7 1429 aa18.23■□□□□ 0.51
SERF2-210ENST00000409960 TET3O43151 1660 aa18.23■□□□□ 0.51
SERF2-210ENST00000409960 FAM135BQ49AJ0 1406 aa18.23■□□□□ 0.51
SERF2-210ENST00000409960 FAM50AQ14320 339 aaKnown RBP18.22■□□□□ 0.51
SERF2-210ENST00000409960 NKTRP30414 1462 aaKnown RBP18.21■□□□□ 0.51
SERF2-210ENST00000409960 TMEM94Q12767 1356 aa18.21■□□□□ 0.51
SERF2-210ENST00000409960 HDGFP51858 240 aaKnown RBP18.2■□□□□ 0.5
SERF2-210ENST00000409960 NWD1Q149M9 1564 aa18.19■□□□□ 0.5
SERF2-210ENST00000409960 SLC26A8Q96RN1 970 aa18.19■□□□□ 0.5
SERF2-210ENST00000409960 PROSER2Q86WR7 435 aaPredicted RBP18.18■□□□□ 0.5
SERF2-210ENST00000409960 GCC2Q8IWJ2 1684 aa18.18■□□□□ 0.5
SERF2-210ENST00000409960 BCANQ96GW7 911 aa18.17■□□□□ 0.5
SERF2-210ENST00000409960 PLEKHG1Q9ULL1 1385 aa18.16■□□□□ 0.5
SERF2-210ENST00000409960 UNC13BO14795 1591 aa18.15■□□□□ 0.5
SERF2-210ENST00000409960 MSH6P52701 1360 aa18.15■□□□□ 0.5
SERF2-210ENST00000409960 ZFYVE9O95405 1425 aa18.15■□□□□ 0.5
SERF2-210ENST00000409960 PPP1R15AO75807 674 aaPredicted RBP18.14■□□□□ 0.49
SERF2-210ENST00000409960 ROBO1Q9Y6N7 1651 aa18.14■□□□□ 0.49
SERF2-210ENST00000409960 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.13■□□□□ 0.49
SERF2-210ENST00000409960 RIMS2Q9UQ26 1411 aa18.13■□□□□ 0.49
SERF2-210ENST00000409960 TMEM131LA2VDJ0 1609 aa18.12■□□□□ 0.49
SERF2-210ENST00000409960 MYO5BQ9ULV0 1848 aa18.12■□□□□ 0.49
SERF2-210ENST00000409960 ROCK1Q13464 1354 aa18.12■□□□□ 0.49
SERF2-210ENST00000409960 CHD2O14647 1828 aaKnown RBP18.12■□□□□ 0.49
SERF2-210ENST00000409960 NCOA3Q9Y6Q9 1424 aa18.1■□□□□ 0.49
SERF2-210ENST00000409960 SLC4A1APQ9BWU0 796 aaKnown RBP18.1■□□□□ 0.49
SERF2-210ENST00000409960 TBX22Q9Y458 520 aa18.09■□□□□ 0.49
SERF2-210ENST00000409960 IQGAP3Q86VI3 1631 aa18.09■□□□□ 0.49
SERF2-210ENST00000409960 DIP2AQ14689 1571 aa18.08■□□□□ 0.49
SERF2-210ENST00000409960 E9PCH4 1651 aa18.08■□□□□ 0.48
SERF2-210ENST00000409960 SLAIN2Q9P270 581 aa18.07■□□□□ 0.48
SERF2-210ENST00000409960 PIK3R4Q99570 1358 aa18.06■□□□□ 0.48
SERF2-210ENST00000409960 RBM33Q96EV2 1170 aaKnown RBP18.06■□□□□ 0.48
SERF2-210ENST00000409960 RGS17Q9UGC6 210 aaPredicted RBP18.06■□□□□ 0.48
SERF2-210ENST00000409960 CHGAP10645 457 aaKnown RBP18.05■□□□□ 0.48
SERF2-210ENST00000409960 PHLPP1O60346 1717 aa18.04■□□□□ 0.48
SERF2-210ENST00000409960 JCADQ9P266 1359 aa18.03■□□□□ 0.48
SERF2-210ENST00000409960 NUP155O75694 1391 aa18.02■□□□□ 0.47
SERF2-210ENST00000409960 ADAMTS13Q76LX8 1427 aa18.01■□□□□ 0.47
SERF2-210ENST00000409960 C14orf37Q86TY3 774 aa18.01■□□□□ 0.47
SERF2-210ENST00000409960 CADPS2Q86UW7 1296 aa18.01■□□□□ 0.47
SERF2-210ENST00000409960 TRPM2O94759 1503 aa18.01■□□□□ 0.47
SERF2-210ENST00000409960 C19orf44Q9H6X5 657 aa17.99■□□□□ 0.47
SERF2-210ENST00000409960 ATF3P18847 181 aa17.97■□□□□ 0.47
SERF2-210ENST00000409960 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.97■□□□□ 0.47
SERF2-210ENST00000409960 COL16A1Q07092 1604 aaPredicted RBP17.97■□□□□ 0.47
SERF2-210ENST00000409960 POTEAQ6S8J7 498 aa17.96■□□□□ 0.47
SERF2-210ENST00000409960 SPATA31A6Q5VVP1 1343 aa17.96■□□□□ 0.46
SERF2-210ENST00000409960 SPHKAPQ2M3C7 1700 aa17.95■□□□□ 0.46
SERF2-210ENST00000409960 NUTM2DQ5VT03 806 aaPredicted RBP17.95■□□□□ 0.46
SERF2-210ENST00000409960 AHDC1Q5TGY3 1603 aaPredicted RBP17.94■□□□□ 0.46
SERF2-210ENST00000409960 ITGAEP38570 1179 aa17.94■□□□□ 0.46
SERF2-210ENST00000409960 DCCP43146 1447 aa17.94■□□□□ 0.46
SERF2-210ENST00000409960 SETBP1Q9Y6X0 1596 aa17.93■□□□□ 0.46
SERF2-210ENST00000409960 AMOTL2Q9Y2J4 779 aa17.93■□□□□ 0.46
SERF2-210ENST00000409960 SHPRHQ149N8 1683 aa17.9■□□□□ 0.46
SERF2-210ENST00000409960 XRN1Q8IZH2 1706 aaKnown RBP17.9■□□□□ 0.46
SERF2-210ENST00000409960 DCAF8L1A6NGE4 600 aa17.9■□□□□ 0.46
SERF2-210ENST00000409960 PTPRUQ92729 1446 aa17.89■□□□□ 0.46
SERF2-210ENST00000409960 ZNF326Q5BKZ1 582 aaKnown RBP17.89■□□□□ 0.45
SERF2-210ENST00000409960 NRXN3Q9Y4C0 1643 aa17.89■□□□□ 0.45
SERF2-210ENST00000409960 MEX3CQ5U5Q3 659 aaKnown RBP17.88■□□□□ 0.45
SERF2-210ENST00000409960 ZNF772Q68DY9 489 aaPredicted RBP17.88■□□□□ 0.45
SERF2-210ENST00000409960 BRINP3Q76B58 766 aa17.86■□□□□ 0.45
SERF2-210ENST00000409960 LRP6O75581 1613 aa17.85■□□□□ 0.45
SERF2-210ENST00000409960 KIF1BO60333 1816 aa17.84■□□□□ 0.45
SERF2-210ENST00000409960 NEXMIFQ5QGS0 1516 aa17.83■□□□□ 0.45
SERF2-210ENST00000409960 ASXL1Q8IXJ9 1541 aa17.83■□□□□ 0.45
SERF2-210ENST00000409960 CLTCL1P53675 1640 aa17.83■□□□□ 0.44
SERF2-210ENST00000409960 MST1RQ04912 1400 aa17.82■□□□□ 0.44
SERF2-210ENST00000409960 RRBP1Q9P2E9 1410 aaKnown RBP17.82■□□□□ 0.44
SERF2-210ENST00000409960 METP08581 1390 aa17.82■□□□□ 0.44
SERF2-210ENST00000409960 SETD5Q9C0A6 1442 aa17.81■□□□□ 0.44
SERF2-210ENST00000409960 ADGRL3Q9HAR2 1447 aa17.81■□□□□ 0.44
SERF2-210ENST00000409960 SETD1AO15047 1707 aaKnown RBP17.81■□□□□ 0.44
SERF2-210ENST00000409960 NHSL1Q5SYE7 1610 aa17.81■□□□□ 0.44
SERF2-210ENST00000409960 PPARGC1BQ86YN6 1023 aaKnown RBP17.8■□□□□ 0.44
SERF2-210ENST00000409960 LRRC59Q96AG4 307 aaKnown RBP17.8■□□□□ 0.44
SERF2-210ENST00000409960 NAIPQ13075 1403 aa17.8■□□□□ 0.44
SERF2-210ENST00000409960 VGFO15240 615 aaPredicted RBP17.78■□□□□ 0.44
SERF2-210ENST00000409960 PTCH1Q13635 1447 aa17.77■□□□□ 0.44
SERF2-210ENST00000409960 NALCNQ8IZF0 1738 aa17.77■□□□□ 0.44
SERF2-210ENST00000409960 RXRBP28702 533 aa17.76■□□□□ 0.43
SERF2-210ENST00000409960 CDK12Q9NYV4 1490 aaPredicted RBP17.75■□□□□ 0.43
SERF2-210ENST00000409960 RPGRIP1LQ68CZ1 1315 aa17.75■□□□□ 0.43
SERF2-210ENST00000409960 HFM1A2PYH4 1435 aa17.75■□□□□ 0.43
SERF2-210ENST00000409960 NUTM2BA6NNL0 878 aaPredicted RBP17.75■□□□□ 0.43
SERF2-210ENST00000409960 NUTM2EB1AL46 878 aaPredicted RBP17.75■□□□□ 0.43
SERF2-210ENST00000409960 NUTM2AQ8IVF1 878 aaPredicted RBP17.75■□□□□ 0.43
SERF2-210ENST00000409960 PRAG1Q86YV5 1406 aa17.73■□□□□ 0.43
SERF2-210ENST00000409960 TRIM52Q96A61 297 aa17.73■□□□□ 0.43
SERF2-210ENST00000409960 AFF2P51816 1311 aa17.72■□□□□ 0.43
SERF2-210ENST00000409960 C1orf167Q5SNV9 1468 aa17.71■□□□□ 0.43
SERF2-210ENST00000409960 PNPLA6Q8IY17 1366 aa17.71■□□□□ 0.43
SERF2-210ENST00000409960 LAMC1P11047 1609 aa17.71■□□□□ 0.43
SERF2-210ENST00000409960 UPF1Q92900 1129 aaKnown RBP eCLIP17.7■□□□□ 0.426e-17■■□□□ 12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms