RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 DHX29Q7Z478 1369 aaKnown RBP11.95□□□□□ -0.5
UBE2F-204ENST00000409953 TRPC5Q9UL62 973 aaPredicted RBP11.95□□□□□ -0.5
UBE2F-204ENST00000409953 ERVK-7P63135 1459 aa11.95□□□□□ -0.5
UBE2F-204ENST00000409953 C1QTNF8P60827 252 aa11.94□□□□□ -0.5
UBE2F-204ENST00000409953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.94□□□□□ -0.5
UBE2F-204ENST00000409953 KIAA1107Q9UPP5 1409 aa11.94□□□□□ -0.5
UBE2F-204ENST00000409953 SF3B2Q13435 895 aaKnown RBP11.93□□□□□ -0.5
UBE2F-204ENST00000409953 SLC26A8Q96RN1 970 aa11.93□□□□□ -0.5
UBE2F-204ENST00000409953 USP21Q9UK80 565 aa11.93□□□□□ -0.5
UBE2F-204ENST00000409953 SETD5Q9C0A6 1442 aa11.93□□□□□ -0.5
UBE2F-204ENST00000409953 MAST1Q9Y2H9 1570 aa11.92□□□□□ -0.5
UBE2F-204ENST00000409953 PLEKHH2Q8IVE3 1493 aa11.92□□□□□ -0.5
UBE2F-204ENST00000409953 SLC24A1O60721 1099 aa11.92□□□□□ -0.5
UBE2F-204ENST00000409953 ZNF784Q8NCA9 323 aaPredicted RBP11.92□□□□□ -0.5
UBE2F-204ENST00000409953 FMN1Q68DA7 1419 aa11.92□□□□□ -0.5
UBE2F-204ENST00000409953 ADAMTS2O95450 1211 aa11.91□□□□□ -0.5
UBE2F-204ENST00000409953 MYCNP04198 464 aaPredicted RBP11.91□□□□□ -0.5
UBE2F-204ENST00000409953 ATRNO75882 1429 aa11.91□□□□□ -0.5
UBE2F-204ENST00000409953 BRINP3Q76B58 766 aa11.9□□□□□ -0.5
UBE2F-204ENST00000409953 LRRIQ1Q96JM4 1722 aa11.9□□□□□ -0.5
UBE2F-204ENST00000409953 GPATCH8Q9UKJ3 1502 aaKnown RBP11.89□□□□□ -0.51
UBE2F-204ENST00000409953 PNPLA6Q8IY17 1366 aa11.89□□□□□ -0.51
UBE2F-204ENST00000409953 TMEM2Q9UHN6 1383 aa11.89□□□□□ -0.51
UBE2F-204ENST00000409953 TET3O43151 1660 aa11.88□□□□□ -0.51
UBE2F-204ENST00000409953 C14orf37Q86TY3 774 aa11.88□□□□□ -0.51
UBE2F-204ENST00000409953 CADPS2Q86UW7 1296 aa11.88□□□□□ -0.51
UBE2F-204ENST00000409953 RTEL1-TNFRSF6BF6WH68 1400 aa11.87□□□□□ -0.51
UBE2F-204ENST00000409953 LRRC59Q96AG4 307 aaKnown RBP11.87□□□□□ -0.51
UBE2F-204ENST00000409953 ATF3P18847 181 aa11.86□□□□□ -0.51
UBE2F-204ENST00000409953 R3HDM1Q15032 1099 aaKnown RBP11.86□□□□□ -0.51
UBE2F-204ENST00000409953 UNC13BO14795 1591 aa11.86□□□□□ -0.51
UBE2F-204ENST00000409953 ASXL1Q8IXJ9 1541 aa11.86□□□□□ -0.51
UBE2F-204ENST00000409953 CAMSAP2Q08AD1 1489 aa11.85□□□□□ -0.51
UBE2F-204ENST00000409953 CEP350Q5VT06 3117 aa11.85□□□□□ -0.51
UBE2F-204ENST00000409953 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.85□□□□□ -0.51
UBE2F-204ENST00000409953 MROH1Q8NDA8 1641 aa11.85□□□□□ -0.51
UBE2F-204ENST00000409953 NCOA3Q9Y6Q9 1424 aa11.85□□□□□ -0.51
UBE2F-204ENST00000409953 FNBP4Q8N3X1 1017 aaPredicted RBP11.84□□□□□ -0.51
UBE2F-204ENST00000409953 CFDP1Q9UEE9 299 aaPredicted RBP11.83□□□□□ -0.52
UBE2F-204ENST00000409953 PIK3C2BO00750 1634 aa11.82□□□□□ -0.52
UBE2F-204ENST00000409953 BAG6P46379 1132 aa11.81□□□□□ -0.52
UBE2F-204ENST00000409953 BCANQ96GW7 911 aa11.81□□□□□ -0.52
UBE2F-204ENST00000409953 C19orf44Q9H6X5 657 aa11.81□□□□□ -0.52
UBE2F-204ENST00000409953 ARHGAP35Q9NRY4 1499 aa11.81□□□□□ -0.52
UBE2F-204ENST00000409953 CFAP65Q6ZU64 1925 aaKnown RBP11.8□□□□□ -0.52
UBE2F-204ENST00000409953 STAG3Q9UJ98 1225 aa11.8□□□□□ -0.52
UBE2F-204ENST00000409953 U3KPZ7 1027 aaPredicted RBP11.8□□□□□ -0.52
UBE2F-204ENST00000409953 CHD2O14647 1828 aaKnown RBP11.8□□□□□ -0.52
UBE2F-204ENST00000409953 EFCAB6Q5THR3 1501 aa11.8□□□□□ -0.52
UBE2F-204ENST00000409953 PTCH1Q13635 1447 aa11.79□□□□□ -0.52
UBE2F-204ENST00000409953 GJD4Q96KN9 370 aaPredicted RBP11.79□□□□□ -0.52
UBE2F-204ENST00000409953 CCDC18Q5T9S5 1454 aa11.78□□□□□ -0.52
UBE2F-204ENST00000409953 MBD5Q9P267 1494 aa11.78□□□□□ -0.52
UBE2F-204ENST00000409953 SPHKAPQ2M3C7 1700 aa11.78□□□□□ -0.52
UBE2F-204ENST00000409953 ATXN8OSP0DMR3 200 aa11.78□□□□□ -0.52
UBE2F-204ENST00000409953 DDX17Q92841 729 aaKnown RBP11.78□□□□□ -0.52
UBE2F-204ENST00000409953 CAMTA1Q9Y6Y1 1673 aa11.76□□□□□ -0.53
UBE2F-204ENST00000409953 SLC34A2O95436 690 aa11.76□□□□□ -0.53
UBE2F-204ENST00000409953 ZNF644Q9H582 1327 aaPredicted RBP11.76□□□□□ -0.53
UBE2F-204ENST00000409953 BRWD3Q6RI45 1802 aa11.76□□□□□ -0.53
UBE2F-204ENST00000409953 NINLQ9Y2I6 1382 aa11.76□□□□□ -0.53
UBE2F-204ENST00000409953 CEP152O94986 1710 aa11.75□□□□□ -0.53
UBE2F-204ENST00000409953 PPP1R1BQ9UD71 204 aaPredicted RBP11.75□□□□□ -0.53
UBE2F-204ENST00000409953 CCNB3Q8WWL7 1395 aa11.75□□□□□ -0.53
UBE2F-204ENST00000409953 EN1Q05925 392 aaPredicted RBP11.74□□□□□ -0.53
UBE2F-204ENST00000409953 RALGAPBQ86X10 1494 aa11.74□□□□□ -0.53
UBE2F-204ENST00000409953 GLI3P10071 1580 aa11.74□□□□□ -0.53
UBE2F-204ENST00000409953 DCCP43146 1447 aa11.73□□□□□ -0.53
UBE2F-204ENST00000409953 MST1RQ04912 1400 aa11.73□□□□□ -0.53
UBE2F-204ENST00000409953 GIGYF1O75420 1035 aaPredicted RBP11.72□□□□□ -0.53
UBE2F-204ENST00000409953 SAMD1Q6SPF0 538 aaPredicted RBP11.71□□□□□ -0.53
UBE2F-204ENST00000409953 SEPT12Q8IYM1 358 aa11.71□□□□□ -0.53
UBE2F-204ENST00000409953 RNF39Q9H2S5 420 aa11.71□□□□□ -0.53
UBE2F-204ENST00000409953 UTRNP46939 3433 aa11.71□□□□□ -0.54
UBE2F-204ENST00000409953 CCDC141Q6ZP82 1450 aa11.7□□□□□ -0.54
UBE2F-204ENST00000409953 PLEKHG1Q9ULL1 1385 aa11.69□□□□□ -0.54
UBE2F-204ENST00000409953 PPP1R15AO75807 674 aaPredicted RBP11.69□□□□□ -0.54
UBE2F-204ENST00000409953 ARHGAP31Q2M1Z3 1444 aa11.69□□□□□ -0.54
UBE2F-204ENST00000409953 KRT27Q7Z3Y8 459 aa11.68□□□□□ -0.54
UBE2F-204ENST00000409953 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.68□□□□□ -0.54
UBE2F-204ENST00000409953 ADGRB3O60242 1522 aa11.67□□□□□ -0.54
UBE2F-204ENST00000409953 CAPN15O75808 1086 aa11.67□□□□□ -0.54
UBE2F-204ENST00000409953 IDI1Q13907 227 aa11.67□□□□□ -0.54
UBE2F-204ENST00000409953 CASKIN1Q8WXD9 1431 aa11.67□□□□□ -0.54
UBE2F-204ENST00000409953 MYOM2P54296 1465 aa11.66□□□□□ -0.54
UBE2F-204ENST00000409953 COL22A1Q8NFW1 1626 aaPredicted RBP11.66□□□□□ -0.54
UBE2F-204ENST00000409953 EIF2AK4Q9P2K8 1649 aaKnown RBP11.65□□□□□ -0.54
UBE2F-204ENST00000409953 SPON1Q9HCB6 807 aa11.65□□□□□ -0.54
UBE2F-204ENST00000409953 TBX22Q9Y458 520 aa11.65□□□□□ -0.54
UBE2F-204ENST00000409953 RGPD1P0DJD0 1748 aa11.65□□□□□ -0.54
UBE2F-204ENST00000409953 MARF1Q9Y4F3 1742 aaKnown RBP11.64□□□□□ -0.55
UBE2F-204ENST00000409953 DISP2A7MBM2 1401 aa11.64□□□□□ -0.55
UBE2F-204ENST00000409953 EZH2Q15910 746 aaKnown RBP11.64□□□□□ -0.55
UBE2F-204ENST00000409953 UNC5CLQ8IV45 518 aa11.64□□□□□ -0.55
UBE2F-204ENST00000409953 SOS2Q07890 1332 aaPredicted RBP11.63□□□□□ -0.55
UBE2F-204ENST00000409953 ZFYVE9O95405 1425 aa11.62□□□□□ -0.55
UBE2F-204ENST00000409953 TRPM2O94759 1503 aa11.62□□□□□ -0.55
UBE2F-204ENST00000409953 LAMC1P11047 1609 aa11.62□□□□□ -0.55
UBE2F-204ENST00000409953 PCDH10Q9P2E7 1040 aa11.62□□□□□ -0.55
UBE2F-204ENST00000409953 CHD4Q14839 1912 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms