RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 SPATA31E1Q6ZUB1 1445 aa20.8■□□□□ 0.92
GYPC-203ENST00000409836 LTKP29376 864 aa20.8■□□□□ 0.92
GYPC-203ENST00000409836 PLEKHG1Q9ULL1 1385 aa20.8■□□□□ 0.92
GYPC-203ENST00000409836 IQSEC2Q5JU85 1478 aa20.8■□□□□ 0.92
GYPC-203ENST00000409836 NRXN3Q9Y4C0 1643 aa20.79■□□□□ 0.92
GYPC-203ENST00000409836 NWD1Q149M9 1564 aa20.78■□□□□ 0.92
GYPC-203ENST00000409836 STAG3Q9UJ98 1225 aa20.78■□□□□ 0.92
GYPC-203ENST00000409836 CPS1P31327 1500 aa20.78■□□□□ 0.92
GYPC-203ENST00000409836 STRCP1A6NGW2 1772 aa20.77■□□□□ 0.92
GYPC-203ENST00000409836 TRIM26Q12899 539 aaPredicted RBP20.77■□□□□ 0.92
GYPC-203ENST00000409836 EID1Q9Y6B2 187 aa20.77■□□□□ 0.92
GYPC-203ENST00000409836 ANKRD30BQ9BXX2 1392 aa20.76■□□□□ 0.91
GYPC-203ENST00000409836 TXNDC2Q86VQ3 553 aa20.76■□□□□ 0.91
GYPC-203ENST00000409836 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.74■□□□□ 0.91
GYPC-203ENST00000409836 SETD1AO15047 1707 aaKnown RBP20.73■□□□□ 0.91
GYPC-203ENST00000409836 ADAMTS13Q76LX8 1427 aa20.72■□□□□ 0.91
GYPC-203ENST00000409836 FOXD1Q16676 465 aa20.72■□□□□ 0.91
GYPC-203ENST00000409836 HDGFP51858 240 aaKnown RBP20.71■□□□□ 0.91
GYPC-203ENST00000409836 CHD2O14647 1828 aaKnown RBP20.71■□□□□ 0.91
GYPC-203ENST00000409836 ZNF335Q9H4Z2 1342 aaPredicted RBP20.7■□□□□ 0.9
GYPC-203ENST00000409836 NKTRP30414 1462 aaKnown RBP20.69■□□□□ 0.9
GYPC-203ENST00000409836 RPGRIP1LQ68CZ1 1315 aa20.69■□□□□ 0.9
GYPC-203ENST00000409836 PIK3R4Q99570 1358 aa20.67■□□□□ 0.9
GYPC-203ENST00000409836 MYOM2P54296 1465 aa20.67■□□□□ 0.9
GYPC-203ENST00000409836 XRN1Q8IZH2 1706 aaKnown RBP20.67■□□□□ 0.9
GYPC-203ENST00000409836 NRXN1Q9ULB1 1477 aa20.66■□□□□ 0.9
GYPC-203ENST00000409836 XIRP1Q702N8 1843 aaKnown RBP20.65■□□□□ 0.9
GYPC-203ENST00000409836 PRAG1Q86YV5 1406 aa20.65■□□□□ 0.9
GYPC-203ENST00000409836 CHGAP10645 457 aaKnown RBP20.65■□□□□ 0.9
GYPC-203ENST00000409836 LAMC1P11047 1609 aa20.63■□□□□ 0.89
GYPC-203ENST00000409836 LRRC7Q96NW7 1537 aa20.63■□□□□ 0.89
GYPC-203ENST00000409836 CERKQ8TCT0 537 aa20.62■□□□□ 0.89
GYPC-203ENST00000409836 TBX22Q9Y458 520 aa20.62■□□□□ 0.89
GYPC-203ENST00000409836 PPP1R15AO75807 674 aaPredicted RBP20.61■□□□□ 0.89
GYPC-203ENST00000409836 PIK3C2GO75747 1445 aa20.61■□□□□ 0.89
GYPC-203ENST00000409836 DHX57Q6P158 1386 aaKnown RBP20.6■□□□□ 0.89
GYPC-203ENST00000409836 ALKQ9UM73 1620 aa20.6■□□□□ 0.89
GYPC-203ENST00000409836 ZNF326Q5BKZ1 582 aaKnown RBP20.59■□□□□ 0.89
GYPC-203ENST00000409836 VGFO15240 615 aaPredicted RBP20.58■□□□□ 0.89
GYPC-203ENST00000409836 KCNA6P17658 529 aa20.56■□□□□ 0.88
GYPC-203ENST00000409836 SLC26A8Q96RN1 970 aa20.56■□□□□ 0.88
GYPC-203ENST00000409836 KNDC1Q76NI1 1749 aa20.55■□□□□ 0.88
GYPC-203ENST00000409836 PTPRUQ92729 1446 aa20.54■□□□□ 0.88
GYPC-203ENST00000409836 ASXL1Q8IXJ9 1541 aa20.54■□□□□ 0.88
GYPC-203ENST00000409836 NCOA3Q9Y6Q9 1424 aa20.53■□□□□ 0.88
GYPC-203ENST00000409836 NUTM2DQ5VT03 806 aaPredicted RBP20.52■□□□□ 0.88
GYPC-203ENST00000409836 PTCH1Q13635 1447 aa20.52■□□□□ 0.87
GYPC-203ENST00000409836 METP08581 1390 aa20.51■□□□□ 0.87
GYPC-203ENST00000409836 STAC3Q96MF2 364 aa20.51■□□□□ 0.87
GYPC-203ENST00000409836 TECPR2O15040 1411 aa20.5■□□□□ 0.87
GYPC-203ENST00000409836 KIAA1210Q9ULL0 1709 aa20.5■□□□□ 0.87
GYPC-203ENST00000409836 FBXO41Q8TF61 875 aa20.49■□□□□ 0.87
GYPC-203ENST00000409836 ADGRF5Q8IZF2 1346 aa20.49■□□□□ 0.87
GYPC-203ENST00000409836 ADGRB1O14514 1584 aa20.46■□□□□ 0.87
GYPC-203ENST00000409836 RGL3Q3MIN7 710 aa20.46■□□□□ 0.87
GYPC-203ENST00000409836 TMEM94Q12767 1356 aa20.46■□□□□ 0.87
GYPC-203ENST00000409836 BCANQ96GW7 911 aa20.44■□□□□ 0.86
GYPC-203ENST00000409836 NALCNQ8IZF0 1738 aa20.44■□□□□ 0.86
GYPC-203ENST00000409836 DCCP43146 1447 aa20.44■□□□□ 0.86
GYPC-203ENST00000409836 DLC1Q96QB1 1528 aa20.41■□□□□ 0.86
GYPC-203ENST00000409836 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.41■□□□□ 0.86
GYPC-203ENST00000409836 LRPPRCP42704 1394 aaKnown RBP20.4■□□□□ 0.86
GYPC-203ENST00000409836 AMOTL2Q9Y2J4 779 aa20.4■□□□□ 0.86
GYPC-203ENST00000409836 C14orf93Q9H972 538 aaKnown RBP20.39■□□□□ 0.85
GYPC-203ENST00000409836 ADGRL3Q9HAR2 1447 aa20.38■□□□□ 0.85
GYPC-203ENST00000409836 ABCC11Q96J66 1382 aa20.38■□□□□ 0.85
GYPC-203ENST00000409836 YTHDC2Q9H6S0 1430 aaKnown RBP20.37■□□□□ 0.85
GYPC-203ENST00000409836 FAM135BQ49AJ0 1406 aa20.36■□□□□ 0.85
GYPC-203ENST00000409836 ROBO2Q9HCK4 1378 aa20.36■□□□□ 0.85
GYPC-203ENST00000409836 CLSPNQ9HAW4 1339 aa20.36■□□□□ 0.85
GYPC-203ENST00000409836 CDC42BPGQ6DT37 1551 aa20.36■□□□□ 0.85
GYPC-203ENST00000409836 PROSER2Q86WR7 435 aaPredicted RBP20.35■□□□□ 0.85
GYPC-203ENST00000409836 SENP3Q9H4L4 574 aaPredicted RBP20.35■□□□□ 0.85
GYPC-203ENST00000409836 TRPM1Q7Z4N2 1603 aa20.35■□□□□ 0.85
GYPC-203ENST00000409836 MSH6P52701 1360 aa20.34■□□□□ 0.85
GYPC-203ENST00000409836 ILDR1Q86SU0 546 aaPredicted RBP20.34■□□□□ 0.85
GYPC-203ENST00000409836 DCAF11Q8TEB1 546 aa20.34■□□□□ 0.85
GYPC-203ENST00000409836 PCGF6Q9BYE7 350 aa20.34■□□□□ 0.85
GYPC-203ENST00000409836 ARHGEF28Q8N1W1 1705 aaKnown RBP20.33■□□□□ 0.85
GYPC-203ENST00000409836 ADGRB2O60241 1585 aa20.33■□□□□ 0.84
GYPC-203ENST00000409836 TOM1O60784 492 aa20.32■□□□□ 0.84
GYPC-203ENST00000409836 UBAP1LF5GYI3 381 aa20.3■□□□□ 0.84
GYPC-203ENST00000409836 SIRT1Q96EB6 747 aa20.3■□□□□ 0.84
GYPC-203ENST00000409836 SIN3AQ96ST3 1273 aa20.3■□□□□ 0.84
GYPC-203ENST00000409836 ROBO1Q9Y6N7 1651 aa20.29■□□□□ 0.84
GYPC-203ENST00000409836 CFAP70Q5T0N1 1121 aa20.29■□□□□ 0.84
GYPC-203ENST00000409836 L3MBTL2Q969R5 705 aa20.28■□□□□ 0.84
GYPC-203ENST00000409836 C19orf44Q9H6X5 657 aa20.28■□□□□ 0.84
GYPC-203ENST00000409836 FMN2Q9NZ56 1722 aa20.26■□□□□ 0.83
GYPC-203ENST00000409836 MST1RQ04912 1400 aa20.26■□□□□ 0.83
GYPC-203ENST00000409836 TMEM132EQ6IEE7 984 aa20.24■□□□□ 0.83
GYPC-203ENST00000409836 AHDC1Q5TGY3 1603 aaPredicted RBP20.24■□□□□ 0.83
GYPC-203ENST00000409836 GPRASP1Q5JY77 1395 aa20.23■□□□□ 0.83
GYPC-203ENST00000409836 CADPS2Q86UW7 1296 aa20.23■□□□□ 0.83
GYPC-203ENST00000409836 RBM33Q96EV2 1170 aaKnown RBP20.23■□□□□ 0.83
GYPC-203ENST00000409836 KDM2AQ9Y2K7 1162 aa20.23■□□□□ 0.83
GYPC-203ENST00000409836 RALGAPBQ86X10 1494 aa20.23■□□□□ 0.83
GYPC-203ENST00000409836 NHSL1Q5SYE7 1610 aa20.22■□□□□ 0.83
GYPC-203ENST00000409836 TONSLQ96HA7 1378 aa20.21■□□□□ 0.83
GYPC-203ENST00000409836 PLEKHH1Q9ULM0 1364 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms