RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 MADDQ8WXG6 1647 aa13.64□□□□□ -0.23
CUL1-202ENST00000409469 DIP2CQ9Y2E4 1556 aa13.63□□□□□ -0.23
CUL1-202ENST00000409469 HOMEZQ8IX15 550 aa13.63□□□□□ -0.23
CUL1-202ENST00000409469 RICTORQ6R327 1708 aa13.62□□□□□ -0.23
CUL1-202ENST00000409469 DIP2BQ9P265 1576 aa13.62□□□□□ -0.23
CUL1-202ENST00000409469 BCANQ96GW7 911 aa13.62□□□□□ -0.23
CUL1-202ENST00000409469 MROH2AA6NES4 1674 aa13.62□□□□□ -0.23
CUL1-202ENST00000409469 RNF17Q9BXT8 1623 aaKnown RBP13.62□□□□□ -0.23
CUL1-202ENST00000409469 SUPT16HQ9Y5B9 1047 aaKnown RBP13.61□□□□□ -0.23
CUL1-202ENST00000409469 MLECQ14165 292 aa13.6□□□□□ -0.23
CUL1-202ENST00000409469 ABCC3O15438 1527 aa13.59□□□□□ -0.23
CUL1-202ENST00000409469 ARID4BQ4LE39 1312 aaPredicted RBP13.59□□□□□ -0.23
CUL1-202ENST00000409469 NOS1P29475 1434 aa13.59□□□□□ -0.23
CUL1-202ENST00000409469 CC2D1BQ5T0F9 858 aaKnown RBP13.58□□□□□ -0.23
CUL1-202ENST00000409469 COL17A1Q9UMD9 1497 aaPredicted RBP13.58□□□□□ -0.24
CUL1-202ENST00000409469 SIGLEC1Q9BZZ2 1709 aa13.57□□□□□ -0.24
CUL1-202ENST00000409469 PANK3Q9H999 370 aa13.57□□□□□ -0.24
CUL1-202ENST00000409469 LMTK2Q8IWU2 1503 aa13.57□□□□□ -0.24
CUL1-202ENST00000409469 TMF1P82094 1093 aa13.57□□□□□ -0.24
CUL1-202ENST00000409469 FBXO31Q5XUX0 539 aaPredicted RBP13.57□□□□□ -0.24
CUL1-202ENST00000409469 TMEM132EQ6IEE7 984 aa13.57□□□□□ -0.24
CUL1-202ENST00000409469 KIF1BO60333 1816 aa13.56□□□□□ -0.24
CUL1-202ENST00000409469 FKBP8Q14318 412 aa13.56□□□□□ -0.24
CUL1-202ENST00000409469 GLI2P10070 1586 aa13.56□□□□□ -0.24
CUL1-202ENST00000409469 IRX6P78412 446 aaPredicted RBP13.54□□□□□ -0.24
CUL1-202ENST00000409469 CAMSAP1Q5T5Y3 1602 aa13.54□□□□□ -0.24
CUL1-202ENST00000409469 TPRNQ4KMQ1 711 aa13.54□□□□□ -0.24
CUL1-202ENST00000409469 LAMC1P11047 1609 aa13.54□□□□□ -0.24
CUL1-202ENST00000409469 PER1O15534 1290 aaPredicted RBP13.54□□□□□ -0.24
CUL1-202ENST00000409469 IDI1Q13907 227 aa13.54□□□□□ -0.24
CUL1-202ENST00000409469 TMC1Q8TDI8 760 aa13.54□□□□□ -0.24
CUL1-202ENST00000409469 TRAK1Q9UPV9 953 aa13.54□□□□□ -0.24
CUL1-202ENST00000409469 SCAF11Q99590 1463 aaKnown RBP13.53□□□□□ -0.24
CUL1-202ENST00000409469 ADGRB3O60242 1522 aa13.53□□□□□ -0.24
CUL1-202ENST00000409469 IQGAP1P46940 1657 aa13.52□□□□□ -0.24
CUL1-202ENST00000409469 SYNMO15061 1565 aa13.52□□□□□ -0.25
CUL1-202ENST00000409469 SALL2Q9Y467 1007 aaPredicted RBP13.5□□□□□ -0.25
CUL1-202ENST00000409469 MYOM2P54296 1465 aa13.49□□□□□ -0.25
CUL1-202ENST00000409469 IFT172Q9UG01 1749 aa13.49□□□□□ -0.25
CUL1-202ENST00000409469 SAFB2Q14151 953 aaKnown RBP eCLIP13.49□□□□□ -0.25
CUL1-202ENST00000409469 KTN1Q86UP2 1357 aaKnown RBP13.48□□□□□ -0.25
CUL1-202ENST00000409469 PNISRQ8TF01 805 aaKnown RBP13.48□□□□□ -0.25
CUL1-202ENST00000409469 MYBBP1AQ9BQG0 1328 aaKnown RBP13.48□□□□□ -0.25
CUL1-202ENST00000409469 KIF13AQ9H1H9 1805 aa13.48□□□□□ -0.25
CUL1-202ENST00000409469 PIK3C2GO75747 1445 aa13.46□□□□□ -0.25
CUL1-202ENST00000409469 ZMYM4Q5VZL5 1548 aa13.46□□□□□ -0.25
CUL1-202ENST00000409469 PARD3Q8TEW0 1356 aa13.46□□□□□ -0.26
CUL1-202ENST00000409469 STAC3Q96MF2 364 aa13.46□□□□□ -0.26
CUL1-202ENST00000409469 STK26Q9P289 416 aa13.46□□□□□ -0.26
CUL1-202ENST00000409469 PPLO60437 1756 aa13.45□□□□□ -0.26
CUL1-202ENST00000409469 EIF3AQ14152 1382 aaKnown RBP13.45□□□□□ -0.26
CUL1-202ENST00000409469 RALBP1Q15311 655 aa13.45□□□□□ -0.26
CUL1-202ENST00000409469 NRXN1Q9ULB1 1477 aa13.45□□□□□ -0.26
CUL1-202ENST00000409469 ZBED9Q6R2W3 1325 aa13.44□□□□□ -0.26
CUL1-202ENST00000409469 C14orf93Q9H972 538 aaKnown RBP13.44□□□□□ -0.26
CUL1-202ENST00000409469 MYO5BQ9ULV0 1848 aa13.44□□□□□ -0.26
CUL1-202ENST00000409469 NEURL4Q96JN8 1562 aa13.44□□□□□ -0.26
CUL1-202ENST00000409469 NEFLP07196 543 aa13.43□□□□□ -0.26
CUL1-202ENST00000409469 KNSTRNQ9Y448 316 aa13.43□□□□□ -0.26
CUL1-202ENST00000409469 ERVK-7P63135 1459 aa13.43□□□□□ -0.26
CUL1-202ENST00000409469 STAG3Q9UJ98 1225 aa13.43□□□□□ -0.26
CUL1-202ENST00000409469 PIK3C2BO00750 1634 aa13.43□□□□□ -0.26
CUL1-202ENST00000409469 CENPJQ9HC77 1338 aaPredicted RBP13.43□□□□□ -0.26
CUL1-202ENST00000409469 NLRP13Q86W25 1043 aa13.42□□□□□ -0.26
CUL1-202ENST00000409469 ARHGAP31Q2M1Z3 1444 aa13.42□□□□□ -0.26
CUL1-202ENST00000409469 KIAA1210Q9ULL0 1709 aa13.42□□□□□ -0.26
CUL1-202ENST00000409469 PREX1Q8TCU6 1659 aa13.42□□□□□ -0.26
CUL1-202ENST00000409469 NEXMIFQ5QGS0 1516 aa13.42□□□□□ -0.26
CUL1-202ENST00000409469 BRD4O60885 1362 aaPredicted RBP13.41□□□□□ -0.26
CUL1-202ENST00000409469 CLTCQ00610 1675 aaKnown RBP13.41□□□□□ -0.26
CUL1-202ENST00000409469 ADGRB1O14514 1584 aa13.41□□□□□ -0.26
CUL1-202ENST00000409469 MYOM1P52179 1685 aa13.41□□□□□ -0.26
CUL1-202ENST00000409469 ZC3H13Q5T200 1668 aaKnown RBP13.41□□□□□ -0.26
CUL1-202ENST00000409469 VGFO15240 615 aaPredicted RBP13.4□□□□□ -0.26
CUL1-202ENST00000409469 NPM2Q86SE8 214 aaKnown RBP13.4□□□□□ -0.26
CUL1-202ENST00000409469 CARD14Q9BXL6 1004 aa13.4□□□□□ -0.26
CUL1-202ENST00000409469 SLC52A1Q9NWF4 448 aa13.4□□□□□ -0.26
CUL1-202ENST00000409469 SLC12A5Q9H2X9 1139 aa13.39□□□□□ -0.27
CUL1-202ENST00000409469 PDIA4P13667 645 aaKnown RBP13.39□□□□□ -0.27
CUL1-202ENST00000409469 CDCA8Q53HL2 280 aa13.39□□□□□ -0.27
CUL1-202ENST00000409469 RPGRIP1LQ68CZ1 1315 aa13.39□□□□□ -0.27
CUL1-202ENST00000409469 KDM5AP29375 1690 aaKnown RBP13.37□□□□□ -0.27
CUL1-202ENST00000409469 TNNT2P45379 298 aaPredicted RBP13.37□□□□□ -0.27
CUL1-202ENST00000409469 LRPPRCP42704 1394 aaKnown RBP13.37□□□□□ -0.27
CUL1-202ENST00000409469 TMEM131LA2VDJ0 1609 aa13.37□□□□□ -0.27
CUL1-202ENST00000409469 TRHP20396 242 aaPredicted RBP13.36□□□□□ -0.27
CUL1-202ENST00000409469 PPP2R1AP30153 589 aa13.36□□□□□ -0.27
CUL1-202ENST00000409469 C14orf37Q86TY3 774 aa13.36□□□□□ -0.27
CUL1-202ENST00000409469 CABP2Q9NPB3 220 aa13.36□□□□□ -0.27
CUL1-202ENST00000409469 ESF1Q9H501 851 aaKnown RBP13.36□□□□□ -0.27
CUL1-202ENST00000409469 ARHGEF40Q8TER5 1519 aa13.35□□□□□ -0.27
CUL1-202ENST00000409469 QRICH2Q9H0J4 1663 aa13.35□□□□□ -0.27
CUL1-202ENST00000409469 SETBP1Q9Y6X0 1596 aa13.35□□□□□ -0.27
CUL1-202ENST00000409469 ASXL1Q8IXJ9 1541 aa13.34□□□□□ -0.27
CUL1-202ENST00000409469 MINK1Q8N4C8 1332 aaPredicted RBP13.34□□□□□ -0.27
CUL1-202ENST00000409469 CEBPAP49715 358 aaPredicted RBP13.34□□□□□ -0.27
CUL1-202ENST00000409469 ADAMTS8Q9UP79 889 aa13.33□□□□□ -0.28
CUL1-202ENST00000409469 AGLP35573 1532 aa13.33□□□□□ -0.28
CUL1-202ENST00000409469 HAP1P54257 671 aaPredicted RBP13.33□□□□□ -0.28
CUL1-202ENST00000409469 PRAM1Q96QH2 718 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms