RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 HRO43593 1189 aa13.37□□□□□ -0.27
PTPN12-202ENST00000407343 FAM98CQ17RN3 349 aaKnown RBP13.36□□□□□ -0.27
PTPN12-202ENST00000407343 ADGRD1Q6QNK2 874 aa13.36□□□□□ -0.27
PTPN12-202ENST00000407343 SH3D19Q5HYK7 790 aa13.34□□□□□ -0.27
PTPN12-202ENST00000407343 SWT1Q5T5J6 900 aaKnown RBP13.34□□□□□ -0.27
PTPN12-202ENST00000407343 KRTAP3-3Q9BYR6 98 aa13.34□□□□□ -0.27
PTPN12-202ENST00000407343 KRTAP3-2Q9BYR7 98 aa13.34□□□□□ -0.27
PTPN12-202ENST00000407343 LAPTM4BQ86VI4 370 aa13.33□□□□□ -0.28
PTPN12-202ENST00000407343 DDX11L8A8MPP1 907 aa13.31□□□□□ -0.28
PTPN12-202ENST00000407343 SLC10A3P09131 477 aa13.31□□□□□ -0.28
PTPN12-202ENST00000407343 SULF1Q8IWU6 871 aa13.3□□□□□ -0.28
PTPN12-202ENST00000407343 NBPF3Q9H094 633 aa13.3□□□□□ -0.28
PTPN12-202ENST00000407343 MYSM1Q5VVJ2 828 aa13.29□□□□□ -0.28
PTPN12-202ENST00000407343 SAMD7Q7Z3H4 446 aa13.28□□□□□ -0.28
PTPN12-202ENST00000407343 TBC1D2Q9BYX2 928 aa13.28□□□□□ -0.28
PTPN12-202ENST00000407343 SKIV2LQ15477 1246 aaKnown RBP13.27□□□□□ -0.29
PTPN12-202ENST00000407343 SPIRE2Q8WWL2 714 aa13.27□□□□□ -0.29
PTPN12-202ENST00000407343 ZFRQ96KR1 1074 aaKnown RBP13.27□□□□□ -0.29
PTPN12-202ENST00000407343 RSPH6AQ9H0K4 717 aa13.25□□□□□ -0.29
PTPN12-202ENST00000407343 TIMELESSQ9UNS1 1208 aa13.25□□□□□ -0.29
PTPN12-202ENST00000407343 GCGRP47871 477 aa13.23□□□□□ -0.29
PTPN12-202ENST00000407343 ANKRD13DQ6ZTN6 518 aa13.23□□□□□ -0.29
PTPN12-202ENST00000407343 MRPL50Q8N5N7 158 aaKnown RBP13.23□□□□□ -0.29
PTPN12-202ENST00000407343 PROCA1Q8NCQ7 364 aaPredicted RBP13.23□□□□□ -0.29
PTPN12-202ENST00000407343 FBXO31Q5XUX0 539 aaPredicted RBP13.22□□□□□ -0.29
PTPN12-202ENST00000407343 RDH13Q8NBN7 331 aa13.22□□□□□ -0.29
PTPN12-202ENST00000407343 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.22□□□□□ -0.29
PTPN12-202ENST00000407343 LIMD1Q9UGP4 676 aa13.22□□□□□ -0.29
PTPN12-202ENST00000407343 POLR3EQ9NVU0 708 aa13.21□□□□□ -0.29
PTPN12-202ENST00000407343 PCMTD1Q96MG8 357 aaPredicted RBP13.2□□□□□ -0.3
PTPN12-202ENST00000407343 POTEGQ6S5H5 508 aa13.19□□□□□ -0.3
PTPN12-202ENST00000407343 SLF2Q8IX21 1173 aa13.19□□□□□ -0.3
PTPN12-202ENST00000407343 MOXD2PA6NHM9 499 aa13.18□□□□□ -0.3
PTPN12-202ENST00000407343 CLK2P49760 499 aaKnown RBP13.18□□□□□ -0.3
PTPN12-202ENST00000407343 DIXDC1Q155Q3 683 aa13.18□□□□□ -0.3
PTPN12-202ENST00000407343 SPTLC1O15269 473 aa13.17□□□□□ -0.3
PTPN12-202ENST00000407343 KDM4AO75164 1064 aa13.17□□□□□ -0.3
PTPN12-202ENST00000407343 RSBN1LQ6PCB5 846 aaPredicted RBP13.17□□□□□ -0.3
PTPN12-202ENST00000407343 POTEMA6NI47 508 aa13.16□□□□□ -0.3
PTPN12-202ENST00000407343 HOXA2O43364 376 aa13.15□□□□□ -0.3
PTPN12-202ENST00000407343 NDUFV2P19404 249 aa13.15□□□□□ -0.3
PTPN12-202ENST00000407343 HDGFP51858 240 aaKnown RBP13.15□□□□□ -0.3
PTPN12-202ENST00000407343 TUSC1Q2TAM9 212 aa13.15□□□□□ -0.3
PTPN12-202ENST00000407343 RIC3Q7Z5B4 369 aa13.15□□□□□ -0.3
PTPN12-202ENST00000407343 NUTM1Q86Y26 1132 aa13.15□□□□□ -0.3
PTPN12-202ENST00000407343 GJA5P36382 358 aa13.14□□□□□ -0.31
PTPN12-202ENST00000407343 SOWAHBA6NEL2 793 aa13.13□□□□□ -0.31
PTPN12-202ENST00000407343 CFHP08603 1231 aa13.13□□□□□ -0.31
PTPN12-202ENST00000407343 HLA-CQ95604 372 aa13.13□□□□□ -0.31
PTPN12-202ENST00000407343 LRCH3Q96II8 777 aa13.13□□□□□ -0.31
PTPN12-202ENST00000407343 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.13□□□□□ -0.31
PTPN12-202ENST00000407343 USP46P62068 366 aa13.12□□□□□ -0.31
PTPN12-202ENST00000407343 RSPH4AQ5TD94 716 aa13.12□□□□□ -0.31
PTPN12-202ENST00000407343 CDAN1Q8IWY9 1227 aa13.12□□□□□ -0.31
PTPN12-202ENST00000407343 BCAMP50895 628 aa13.11□□□□□ -0.31
PTPN12-202ENST00000407343 PCDHB15Q9Y5E8 787 aa13.11□□□□□ -0.31
PTPN12-202ENST00000407343 FUT2Q10981 343 aa13.1□□□□□ -0.31
PTPN12-202ENST00000407343 ANKK1Q8NFD2 765 aa13.1□□□□□ -0.31
PTPN12-202ENST00000407343 PCDHGC3Q9UN70 934 aa13.1□□□□□ -0.31
PTPN12-202ENST00000407343 RNF40O75150 1001 aa13.09□□□□□ -0.31
PTPN12-202ENST00000407343 GUCA2AQ02747 115 aa13.09□□□□□ -0.31
PTPN12-202ENST00000407343 PPP2R2DQ66LE6 453 aa13.09□□□□□ -0.31
PTPN12-202ENST00000407343 QPCTQ16769 361 aa13.08□□□□□ -0.32
PTPN12-202ENST00000407343 LILRB3O75022 631 aa13.07□□□□□ -0.32
PTPN12-202ENST00000407343 SLC4A3P48751 1232 aa13.07□□□□□ -0.32
PTPN12-202ENST00000407343 WNT2BQ93097 391 aa13.07□□□□□ -0.32
PTPN12-202ENST00000407343 HPS5Q9UPZ3 1129 aa13.05□□□□□ -0.32
PTPN12-202ENST00000407343 GOLGA8CPA6NN73 597 aa13.04□□□□□ -0.32
PTPN12-202ENST00000407343 ACTN4O43707 911 aaKnown RBP13.04□□□□□ -0.32
PTPN12-202ENST00000407343 FDX1P10109 184 aa13.04□□□□□ -0.32
PTPN12-202ENST00000407343 RFC5P40937 340 aa13.04□□□□□ -0.32
PTPN12-202ENST00000407343 APLP1P51693 650 aa13.04□□□□□ -0.32
PTPN12-202ENST00000407343 C14orf37Q86TY3 774 aa13.04□□□□□ -0.32
PTPN12-202ENST00000407343 STAC3Q96MF2 364 aa13.03□□□□□ -0.32
PTPN12-202ENST00000407343 TSR3Q9UJK0 312 aaKnown RBP13.03□□□□□ -0.32
PTPN12-202ENST00000407343 ATP6V1AP38606 617 aa13.02□□□□□ -0.33
PTPN12-202ENST00000407343 CSPP1Q1MSJ5 1256 aa13.02□□□□□ -0.33
PTPN12-202ENST00000407343 RTL5Q5HYW3 569 aaPredicted RBP13.02□□□□□ -0.33
PTPN12-202ENST00000407343 MORN1Q5T089 497 aa13.02□□□□□ -0.33
PTPN12-202ENST00000407343 PRPF38BQ5VTL8 546 aaKnown RBP13.02□□□□□ -0.33
PTPN12-202ENST00000407343 THSD4Q6ZMP0 1018 aa13.02□□□□□ -0.33
PTPN12-202ENST00000407343 CABLES1Q8TDN4 633 aa13.02□□□□□ -0.33
PTPN12-202ENST00000407343 HRCP23327 699 aa13.01□□□□□ -0.33
PTPN12-202ENST00000407343 KMT5BQ4FZB7 885 aa13.01□□□□□ -0.33
PTPN12-202ENST00000407343 ERICH6Q7L0X2 663 aa13□□□□□ -0.33
PTPN12-202ENST00000407343 NECTIN2Q92692 538 aa13□□□□□ -0.33
PTPN12-202ENST00000407343 WBP1LQ9NX94 342 aa13□□□□□ -0.33
PTPN12-202ENST00000407343 PPP4CP60510 307 aa12.99□□□□□ -0.33
PTPN12-202ENST00000407343 MCM6Q14566 821 aa12.99□□□□□ -0.33
PTPN12-202ENST00000407343 PUS10Q3MIT2 529 aaKnown RBP12.99□□□□□ -0.33
PTPN12-202ENST00000407343 KCTD12Q96CX2 325 aaKnown RBP12.97□□□□□ -0.33
PTPN12-202ENST00000407343 FLIIQ13045 1269 aa12.96□□□□□ -0.33
PTPN12-202ENST00000407343 ZBTB3Q9H5J0 574 aa12.96□□□□□ -0.33
PTPN12-202ENST00000407343 SLC27A5Q9Y2P5 690 aa12.96□□□□□ -0.33
PTPN12-202ENST00000407343 GRIPAP1Q4V328 841 aa12.95□□□□□ -0.34
PTPN12-202ENST00000407343 PRR14Q9BWN1 585 aa12.95□□□□□ -0.34
PTPN12-202ENST00000407343 BANK1Q8NDB2 785 aa12.94□□□□□ -0.34
PTPN12-202ENST00000407343 SYMPKQ92797 1274 aaKnown RBP12.94□□□□□ -0.34
PTPN12-202ENST00000407343 ATP1B4Q9UN42 357 aaPredicted RBP12.94□□□□□ -0.34
PTPN12-202ENST00000407343 MTMR2Q13614 643 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms