RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 TMEM94Q12767 1356 aa20.08■□□□□ 0.81
PRAME-206ENST00000406503 NKTRP30414 1462 aaKnown RBP20.08■□□□□ 0.81
PRAME-206ENST00000406503 FAM50AQ14320 339 aaKnown RBP20.07■□□□□ 0.8
PRAME-206ENST00000406503 SLC26A8Q96RN1 970 aa20.07■□□□□ 0.8
PRAME-206ENST00000406503 FAM135BQ49AJ0 1406 aa20.06■□□□□ 0.8
PRAME-206ENST00000406503 KCNA6P17658 529 aa20.05■□□□□ 0.8
PRAME-206ENST00000406503 SLC52A1Q9NWF4 448 aa20.05■□□□□ 0.8
PRAME-206ENST00000406503 RBM33Q96EV2 1170 aaKnown RBP20.03■□□□□ 0.8
PRAME-206ENST00000406503 RIMS2Q9UQ26 1411 aa20.02■□□□□ 0.79
PRAME-206ENST00000406503 PLEKHG1Q9ULL1 1385 aa20.01■□□□□ 0.79
PRAME-206ENST00000406503 RGS17Q9UGC6 210 aaPredicted RBP20.01■□□□□ 0.79
PRAME-206ENST00000406503 PHLPP1O60346 1717 aa20.01■□□□□ 0.79
PRAME-206ENST00000406503 PHF23Q9BUL5 403 aaPredicted RBP20■□□□□ 0.79
PRAME-206ENST00000406503 ROCK1Q13464 1354 aa19.99■□□□□ 0.79
PRAME-206ENST00000406503 SPHKAPQ2M3C7 1700 aa19.99■□□□□ 0.79
PRAME-206ENST00000406503 PROSER2Q86WR7 435 aaPredicted RBP19.98■□□□□ 0.79
PRAME-206ENST00000406503 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.97■□□□□ 0.79
PRAME-206ENST00000406503 ADAMTS13Q76LX8 1427 aa19.97■□□□□ 0.79
PRAME-206ENST00000406503 DIP2AQ14689 1571 aa19.96■□□□□ 0.79
PRAME-206ENST00000406503 NRXN3Q9Y4C0 1643 aa19.96■□□□□ 0.79
PRAME-206ENST00000406503 COL16A1Q07092 1604 aaPredicted RBP19.95■□□□□ 0.78
PRAME-206ENST00000406503 MSH6P52701 1360 aa19.92■□□□□ 0.78
PRAME-206ENST00000406503 XRN1Q8IZH2 1706 aaKnown RBP19.9■□□□□ 0.78
PRAME-206ENST00000406503 SETD1AO15047 1707 aaKnown RBP19.89■□□□□ 0.77
PRAME-206ENST00000406503 BCANQ96GW7 911 aa19.89■□□□□ 0.77
PRAME-206ENST00000406503 TBX22Q9Y458 520 aa19.89■□□□□ 0.77
PRAME-206ENST00000406503 TRPM2O94759 1503 aa19.88■□□□□ 0.77
PRAME-206ENST00000406503 PTPRUQ92729 1446 aa19.88■□□□□ 0.77
PRAME-206ENST00000406503 NUTM2DQ5VT03 806 aaPredicted RBP19.88■□□□□ 0.77
PRAME-206ENST00000406503 NCOA3Q9Y6Q9 1424 aa19.87■□□□□ 0.77
PRAME-206ENST00000406503 PPP1R15AO75807 674 aaPredicted RBP19.87■□□□□ 0.77
PRAME-206ENST00000406503 SETBP1Q9Y6X0 1596 aa19.87■□□□□ 0.77
PRAME-206ENST00000406503 NUP155O75694 1391 aa19.86■□□□□ 0.77
PRAME-206ENST00000406503 CHGAP10645 457 aaKnown RBP19.86■□□□□ 0.77
PRAME-206ENST00000406503 SLAIN2Q9P270 581 aa19.86■□□□□ 0.77
PRAME-206ENST00000406503 SHPRHQ149N8 1683 aa19.86■□□□□ 0.77
PRAME-206ENST00000406503 CLTCL1P53675 1640 aa19.86■□□□□ 0.77
PRAME-206ENST00000406503 AHDC1Q5TGY3 1603 aaPredicted RBP19.86■□□□□ 0.77
PRAME-206ENST00000406503 POTEAQ6S8J7 498 aa19.85■□□□□ 0.77
PRAME-206ENST00000406503 PIK3R4Q99570 1358 aa19.84■□□□□ 0.77
PRAME-206ENST00000406503 KIF1BO60333 1816 aa19.84■□□□□ 0.77
PRAME-206ENST00000406503 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.84■□□□□ 0.77
PRAME-206ENST00000406503 HDGFP51858 240 aaKnown RBP19.83■□□□□ 0.77
PRAME-206ENST00000406503 LRP6O75581 1613 aa19.83■□□□□ 0.76
PRAME-206ENST00000406503 PPARGC1BQ86YN6 1023 aaKnown RBP19.82■□□□□ 0.76
PRAME-206ENST00000406503 NEXMIFQ5QGS0 1516 aa19.81■□□□□ 0.76
PRAME-206ENST00000406503 ITGAEP38570 1179 aa19.81■□□□□ 0.76
PRAME-206ENST00000406503 JCADQ9P266 1359 aa19.81■□□□□ 0.76
PRAME-206ENST00000406503 NHSL1Q5SYE7 1610 aa19.8■□□□□ 0.76
PRAME-206ENST00000406503 NALCNQ8IZF0 1738 aa19.8■□□□□ 0.76
PRAME-206ENST00000406503 RRBP1Q9P2E9 1410 aaKnown RBP19.77■□□□□ 0.76
PRAME-206ENST00000406503 C19orf44Q9H6X5 657 aa19.75■□□□□ 0.75
PRAME-206ENST00000406503 AMOTL2Q9Y2J4 779 aa19.75■□□□□ 0.75
PRAME-206ENST00000406503 DCCP43146 1447 aa19.74■□□□□ 0.75
PRAME-206ENST00000406503 NAIPQ13075 1403 aa19.74■□□□□ 0.75
PRAME-206ENST00000406503 METP08581 1390 aa19.73■□□□□ 0.75
PRAME-206ENST00000406503 ASXL1Q8IXJ9 1541 aa19.73■□□□□ 0.75
PRAME-206ENST00000406503 MST1RQ04912 1400 aa19.72■□□□□ 0.75
PRAME-206ENST00000406503 CADPS2Q86UW7 1296 aa19.72■□□□□ 0.75
PRAME-206ENST00000406503 PPLO60437 1756 aa19.72■□□□□ 0.75
PRAME-206ENST00000406503 C14orf37Q86TY3 774 aa19.71■□□□□ 0.75
PRAME-206ENST00000406503 BRINP3Q76B58 766 aa19.7■□□□□ 0.74
PRAME-206ENST00000406503 ATF3P18847 181 aa19.69■□□□□ 0.74
PRAME-206ENST00000406503 SPATA31A6Q5VVP1 1343 aa19.68■□□□□ 0.74
PRAME-206ENST00000406503 LAMC1P11047 1609 aa19.68■□□□□ 0.74
PRAME-206ENST00000406503 ADGRL3Q9HAR2 1447 aa19.67■□□□□ 0.74
PRAME-206ENST00000406503 ZNF326Q5BKZ1 582 aaKnown RBP19.65■□□□□ 0.74
PRAME-206ENST00000406503 SETD5Q9C0A6 1442 aa19.65■□□□□ 0.74
PRAME-206ENST00000406503 IFT172Q9UG01 1749 aa19.64■□□□□ 0.73
PRAME-206ENST00000406503 HFM1A2PYH4 1435 aa19.62■□□□□ 0.73
PRAME-206ENST00000406503 PRAG1Q86YV5 1406 aa19.61■□□□□ 0.73
PRAME-206ENST00000406503 PTCH1Q13635 1447 aa19.6■□□□□ 0.73
PRAME-206ENST00000406503 DDX17Q92841 729 aaKnown RBP19.58■□□□□ 0.72
PRAME-206ENST00000406503 C1orf167Q5SNV9 1468 aa19.57■□□□□ 0.72
PRAME-206ENST00000406503 ROBO2Q9HCK4 1378 aa19.57■□□□□ 0.72
PRAME-206ENST00000406503 MEX3CQ5U5Q3 659 aaKnown RBP19.56■□□□□ 0.72
PRAME-206ENST00000406503 ZNF772Q68DY9 489 aaPredicted RBP19.55■□□□□ 0.72
PRAME-206ENST00000406503 PNPLA6Q8IY17 1366 aa19.55■□□□□ 0.72
PRAME-206ENST00000406503 NUTM2BA6NNL0 878 aaPredicted RBP19.53■□□□□ 0.72
PRAME-206ENST00000406503 NUTM2EB1AL46 878 aaPredicted RBP19.53■□□□□ 0.72
PRAME-206ENST00000406503 NUTM2AQ8IVF1 878 aaPredicted RBP19.53■□□□□ 0.72
PRAME-206ENST00000406503 COL22A1Q8NFW1 1626 aaPredicted RBP19.53■□□□□ 0.72
PRAME-206ENST00000406503 KNDC1Q76NI1 1749 aa19.53■□□□□ 0.72
PRAME-206ENST00000406503 CDK12Q9NYV4 1490 aaPredicted RBP19.53■□□□□ 0.72
PRAME-206ENST00000406503 MARF1Q9Y4F3 1742 aaKnown RBP19.52■□□□□ 0.72
PRAME-206ENST00000406503 TRIM52Q96A61 297 aa19.51■□□□□ 0.71
PRAME-206ENST00000406503 CDC42BPGQ6DT37 1551 aa19.51■□□□□ 0.71
PRAME-206ENST00000406503 AFF2P51816 1311 aa19.51■□□□□ 0.71
PRAME-206ENST00000406503 LRRC59Q96AG4 307 aaKnown RBP19.5■□□□□ 0.71
PRAME-206ENST00000406503 EP400Q96L91 3159 aa19.5■□□□□ 0.71
PRAME-206ENST00000406503 VGFO15240 615 aaPredicted RBP19.49■□□□□ 0.71
PRAME-206ENST00000406503 UPF1Q92900 1129 aaKnown RBP eCLIP19.49■□□□□ 0.71
PRAME-206ENST00000406503 RPGRIP1LQ68CZ1 1315 aa19.49■□□□□ 0.71
PRAME-206ENST00000406503 SLC4A1APQ9BWU0 796 aaKnown RBP19.48■□□□□ 0.71
PRAME-206ENST00000406503 SPATA31E1Q6ZUB1 1445 aa19.48■□□□□ 0.71
PRAME-206ENST00000406503 FOXD1Q16676 465 aa19.47■□□□□ 0.71
PRAME-206ENST00000406503 ORAI2Q96SN7 254 aa19.47■□□□□ 0.71
PRAME-206ENST00000406503 RGS12O14924 1447 aa19.47■□□□□ 0.71
PRAME-206ENST00000406503 SOS2Q07890 1332 aaPredicted RBP19.47■□□□□ 0.71
PRAME-206ENST00000406503 RGPD8O14715 1765 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms