RNA–Protein interactions for RNA: ENST00000406386.7

TRIOBP-204, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIOBP, Length 10,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-204ENST00000406386 ROCK1Q13464 1354 aa13.76□□□□□ -0.21
TRIOBP-204ENST00000406386 PLCD4Q9BRC7 762 aa13.76□□□□□ -0.21
TRIOBP-204ENST00000406386 PODXL2Q9NZ53 605 aa13.76□□□□□ -0.21
TRIOBP-204ENST00000406386 TAF3Q5VWG9 929 aa13.76□□□□□ -0.21
TRIOBP-204ENST00000406386 HMGN5P82970 282 aaKnown RBP13.76□□□□□ -0.21
TRIOBP-204ENST00000406386 DYDC1Q8WWB3 177 aa13.75□□□□□ -0.21
TRIOBP-204ENST00000406386 NASPP49321 788 aaPredicted RBP13.75□□□□□ -0.21
TRIOBP-204ENST00000406386 USP8P40818 1118 aa13.75□□□□□ -0.21
TRIOBP-204ENST00000406386 ERLIN2O94905 339 aa13.75□□□□□ -0.21
TRIOBP-204ENST00000406386 TERF2IPQ9NYB0 399 aa13.75□□□□□ -0.21
TRIOBP-204ENST00000406386 EZRP15311 586 aaKnown RBP13.75□□□□□ -0.21
TRIOBP-204ENST00000406386 AXDND1Q5T1B0 1012 aaPredicted RBP13.74□□□□□ -0.21
TRIOBP-204ENST00000406386 FOXD4L6Q3SYB3 417 aaPredicted RBP13.74□□□□□ -0.21
TRIOBP-204ENST00000406386 FOXD4L3Q6VB84 417 aaPredicted RBP13.74□□□□□ -0.21
TRIOBP-204ENST00000406386 SAFB2Q14151 953 aaKnown RBP eCLIP13.74□□□□□ -0.21
TRIOBP-204ENST00000406386 CTDP1Q9Y5B0 961 aaPredicted RBP13.74□□□□□ -0.21
TRIOBP-204ENST00000406386 OFD1O75665 1012 aa13.74□□□□□ -0.21
TRIOBP-204ENST00000406386 PAK3O75914 559 aaPredicted RBP13.74□□□□□ -0.21
TRIOBP-204ENST00000406386 KIF15Q9NS87 1388 aa13.74□□□□□ -0.21
TRIOBP-204ENST00000406386 RNF20Q5VTR2 975 aa13.74□□□□□ -0.21
TRIOBP-204ENST00000406386 OLFM4Q6UX06 510 aa13.74□□□□□ -0.21
TRIOBP-204ENST00000406386 RILPL2Q969X0 211 aa13.74□□□□□ -0.21
TRIOBP-204ENST00000406386 FANCIQ9NVI1 1328 aa13.74□□□□□ -0.21
TRIOBP-204ENST00000406386 ANKRD18AQ8IVF6 992 aa13.73□□□□□ -0.21
TRIOBP-204ENST00000406386 HSPA5P11021 654 aaKnown RBP13.73□□□□□ -0.21
TRIOBP-204ENST00000406386 SAFBQ15424 915 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRIOBP-204ENST00000406386 ANO2Q9NQ90 1003 aa13.72□□□□□ -0.21
TRIOBP-204ENST00000406386 KIF7Q2M1P5 1343 aa13.72□□□□□ -0.21
TRIOBP-204ENST00000406386 NUCB2P80303 420 aa13.72□□□□□ -0.21
TRIOBP-204ENST00000406386 DHX8Q14562 1220 aaKnown RBP13.72□□□□□ -0.21
TRIOBP-204ENST00000406386 NLRP13Q86W25 1043 aa13.72□□□□□ -0.21
TRIOBP-204ENST00000406386 CT47B1P0C2W7 299 aaPredicted RBP13.71□□□□□ -0.21
TRIOBP-204ENST00000406386 GTF2E1P29083 439 aaPredicted RBP13.71□□□□□ -0.21
TRIOBP-204ENST00000406386 TRDNQ13061 729 aa13.69□□□□□ -0.22
TRIOBP-204ENST00000406386 PDE4AP27815 886 aa13.69□□□□□ -0.22
TRIOBP-204ENST00000406386 DEF6Q9H4E7 631 aa13.69□□□□□ -0.22
TRIOBP-204ENST00000406386 BRMS1Q9HCU9 246 aa13.69□□□□□ -0.22
TRIOBP-204ENST00000406386 CLUAP1Q96AJ1 413 aa13.69□□□□□ -0.22
TRIOBP-204ENST00000406386 R3HCC1Q9Y3T6 440 aaKnown RBP13.68□□□□□ -0.22
TRIOBP-204ENST00000406386 LETM1O95202 739 aaPredicted RBP13.68□□□□□ -0.22
TRIOBP-204ENST00000406386 ENOX2Q16206 610 aaKnown RBP13.68□□□□□ -0.22
TRIOBP-204ENST00000406386 ZFYVE27Q5T4F4 411 aa13.68□□□□□ -0.22
TRIOBP-204ENST00000406386 TXLNBQ8N3L3 684 aa13.68□□□□□ -0.22
TRIOBP-204ENST00000406386 SMARCE1Q969G3 411 aa13.68□□□□□ -0.22
TRIOBP-204ENST00000406386 ANKRD45Q5TZF3 282 aa13.68□□□□□ -0.22
TRIOBP-204ENST00000406386 PDILTQ8N807 584 aa13.68□□□□□ -0.22
TRIOBP-204ENST00000406386 CHMP5Q9NZZ3 219 aa13.68□□□□□ -0.22
TRIOBP-204ENST00000406386 SEPT7Q16181 437 aaKnown RBP13.67□□□□□ -0.22
TRIOBP-204ENST00000406386 VPS37CA5D8V6 355 aaPredicted RBP13.67□□□□□ -0.22
TRIOBP-204ENST00000406386 IQCEQ6IPM2 695 aa13.67□□□□□ -0.22
TRIOBP-204ENST00000406386 NFXL1Q6ZNB6 911 aa13.67□□□□□ -0.22
TRIOBP-204ENST00000406386 RABEP1Q15276 862 aa13.67□□□□□ -0.22
TRIOBP-204ENST00000406386 NEFHP12036 1026 aa13.66□□□□□ -0.22
TRIOBP-204ENST00000406386 LUC7LQ9NQ29 371 aaKnown RBP13.66□□□□□ -0.22
TRIOBP-204ENST00000406386 STK26Q9P289 416 aa13.66□□□□□ -0.22
TRIOBP-204ENST00000406386 EIF3JO75822 258 aaKnown RBP13.66□□□□□ -0.22
TRIOBP-204ENST00000406386 MRE11P49959 708 aa13.66□□□□□ -0.22
TRIOBP-204ENST00000406386 FBXW7Q969H0 707 aa13.66□□□□□ -0.22
TRIOBP-204ENST00000406386 SMC3Q9UQE7 1217 aa13.66□□□□□ -0.22
TRIOBP-204ENST00000406386 VPS8Q8N3P4 1428 aa13.66□□□□□ -0.22
TRIOBP-204ENST00000406386 ERICH2A1L162 156 aa13.65□□□□□ -0.22
TRIOBP-204ENST00000406386 DHX16O60231 1041 aaKnown RBP13.65□□□□□ -0.22
TRIOBP-204ENST00000406386 NINLQ9Y2I6 1382 aa13.64□□□□□ -0.23
TRIOBP-204ENST00000406386 ERLIN1O75477 346 aa13.64□□□□□ -0.23
TRIOBP-204ENST00000406386 ZKSCAN2Q63HK3 967 aa13.64□□□□□ -0.23
TRIOBP-204ENST00000406386 PIP4K2AP48426 406 aaPredicted RBP13.64□□□□□ -0.23
TRIOBP-204ENST00000406386 CLASRPQ8N2M8 674 aaKnown RBP13.64□□□□□ -0.23
TRIOBP-204ENST00000406386 TRIM5Q9C035 493 aa13.64□□□□□ -0.23
TRIOBP-204ENST00000406386 KINO60870 393 aaKnown RBP13.63□□□□□ -0.23
TRIOBP-204ENST00000406386 ZBED9Q6R2W3 1325 aa13.63□□□□□ -0.23
TRIOBP-204ENST00000406386 VPS37DQ86XT2 251 aa13.63□□□□□ -0.23
TRIOBP-204ENST00000406386 CAVIN1Q6NZI2 390 aaKnown RBP13.63□□□□□ -0.23
TRIOBP-204ENST00000406386 SMARCA2P51531 1590 aa13.63□□□□□ -0.23
TRIOBP-204ENST00000406386 RAD21O60216 631 aa13.63□□□□□ -0.23
TRIOBP-204ENST00000406386 CCDC146Q8IYE0 955 aa13.62□□□□□ -0.23
TRIOBP-204ENST00000406386 SMC2O95347 1197 aa13.62□□□□□ -0.23
TRIOBP-204ENST00000406386 MBD3O95983 291 aa13.62□□□□□ -0.23
TRIOBP-204ENST00000406386 MAGEC2Q9UBF1 373 aaPredicted RBP13.62□□□□□ -0.23
TRIOBP-204ENST00000406386 IFIT2P09913 472 aaKnown RBP13.62□□□□□ -0.23
TRIOBP-204ENST00000406386 GBP2P32456 591 aaPredicted RBP13.62□□□□□ -0.23
TRIOBP-204ENST00000406386 PRDM2Q13029 1718 aa13.62□□□□□ -0.23
TRIOBP-204ENST00000406386 C9orf78Q9NZ63 289 aaPredicted RBP13.62□□□□□ -0.23
TRIOBP-204ENST00000406386 CCDC9Q9Y3X0 531 aaKnown RBP13.62□□□□□ -0.23
TRIOBP-204ENST00000406386 E9PSI1 815 aa13.61□□□□□ -0.23
TRIOBP-204ENST00000406386 XBP1P17861 261 aa13.61□□□□□ -0.23
TRIOBP-204ENST00000406386 INTS3Q68E01 1043 aaKnown RBP13.61□□□□□ -0.23
TRIOBP-204ENST00000406386 DDX19BQ9UMR2 479 aa13.61□□□□□ -0.23
TRIOBP-204ENST00000406386 MYBBP1AQ9BQG0 1328 aaKnown RBP13.61□□□□□ -0.23
TRIOBP-204ENST00000406386 ZNHIT6Q9NWK9 470 aaKnown RBP13.61□□□□□ -0.23
TRIOBP-204ENST00000406386 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.61□□□□□ -0.23
TRIOBP-204ENST00000406386 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.61□□□□□ -0.23
TRIOBP-204ENST00000406386 TTLL5Q6EMB2 1281 aa13.61□□□□□ -0.23
TRIOBP-204ENST00000406386 SLC26A8Q96RN1 970 aa13.61□□□□□ -0.23
TRIOBP-204ENST00000406386 MEX3CQ5U5Q3 659 aaKnown RBP13.61□□□□□ -0.23
TRIOBP-204ENST00000406386 GIMAP7Q8NHV1 300 aa13.61□□□□□ -0.23
TRIOBP-204ENST00000406386 RRP1P56182 461 aaKnown RBP13.6□□□□□ -0.23
TRIOBP-204ENST00000406386 PDCP20941 246 aa13.6□□□□□ -0.23
TRIOBP-204ENST00000406386 PKD2Q13563 968 aa13.6□□□□□ -0.23
TRIOBP-204ENST00000406386 SDF4Q9BRK5 362 aa13.6□□□□□ -0.23
TRIOBP-204ENST00000406386 ERC2O15083 957 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms