RNA–Protein interactions for RNA: ENST00000404989.1

PARVB-203, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-203ENST00000404989 PREX1Q8TCU6 1659 aa22.49■■□□□ 1.19
PARVB-203ENST00000404989 PPP6R1Q9UPN7 881 aa22.47■■□□□ 1.19
PARVB-203ENST00000404989 POLR3GLQ9BT43 218 aa22.46■■□□□ 1.19
PARVB-203ENST00000404989 PRKRIP1Q9H875 184 aaPredicted RBP22.46■■□□□ 1.19
PARVB-203ENST00000404989 SCAF1Q9H7N4 1312 aaKnown RBP22.46■■□□□ 1.19
PARVB-203ENST00000404989 CHGAP10645 457 aaKnown RBP22.46■■□□□ 1.19
PARVB-203ENST00000404989 SCAF11Q99590 1463 aaKnown RBP22.45■■□□□ 1.18
PARVB-203ENST00000404989 RPGRIP1LQ68CZ1 1315 aa22.44■■□□□ 1.18
PARVB-203ENST00000404989 CFAP70Q5T0N1 1121 aa22.44■■□□□ 1.18
PARVB-203ENST00000404989 IDI1Q13907 227 aa22.42■■□□□ 1.18
PARVB-203ENST00000404989 CLTCQ00610 1675 aaKnown RBP22.42■■□□□ 1.18
PARVB-203ENST00000404989 DISP3Q9P2K9 1392 aa22.42■■□□□ 1.18
PARVB-203ENST00000404989 SLC52A1Q9NWF4 448 aa22.41■■□□□ 1.18
PARVB-203ENST00000404989 ERVK-7P63135 1459 aa22.39■■□□□ 1.18
PARVB-203ENST00000404989 NEXMIFQ5QGS0 1516 aa22.39■■□□□ 1.17
PARVB-203ENST00000404989 PIK3C2GO75747 1445 aa22.39■■□□□ 1.17
PARVB-203ENST00000404989 MYO5BQ9ULV0 1848 aa22.38■■□□□ 1.17
PARVB-203ENST00000404989 FBXO31Q5XUX0 539 aaPredicted RBP22.38■■□□□ 1.17
PARVB-203ENST00000404989 TMEM131LA2VDJ0 1609 aa22.38■■□□□ 1.17
PARVB-203ENST00000404989 SETBP1Q9Y6X0 1596 aa22.37■■□□□ 1.17
PARVB-203ENST00000404989 CCDC184Q52MB2 194 aa22.37■■□□□ 1.17
PARVB-203ENST00000404989 TMF1P82094 1093 aa22.36■■□□□ 1.17
PARVB-203ENST00000404989 C14orf93Q9H972 538 aaKnown RBP22.36■■□□□ 1.17
PARVB-203ENST00000404989 MLECQ14165 292 aa22.33■■□□□ 1.17
PARVB-203ENST00000404989 SPATA31D1Q6ZQQ2 1576 aa22.33■■□□□ 1.16
PARVB-203ENST00000404989 ADGRB1O14514 1584 aa22.32■■□□□ 1.16
PARVB-203ENST00000404989 EIF3AQ14152 1382 aaKnown RBP22.32■■□□□ 1.16
PARVB-203ENST00000404989 ZFYVE9O95405 1425 aa22.32■■□□□ 1.16
PARVB-203ENST00000404989 MYO3AQ8NEV4 1616 aa22.31■■□□□ 1.16
PARVB-203ENST00000404989 SLC24A1O60721 1099 aa22.3■■□□□ 1.16
PARVB-203ENST00000404989 VGFO15240 615 aaPredicted RBP22.29■■□□□ 1.16
PARVB-203ENST00000404989 GTF3C3Q9Y5Q9 886 aa22.29■■□□□ 1.16
PARVB-203ENST00000404989 PER1O15534 1290 aaPredicted RBP22.29■■□□□ 1.16
PARVB-203ENST00000404989 NUTM2DQ5VT03 806 aaPredicted RBP22.27■■□□□ 1.16
PARVB-203ENST00000404989 ZMYM3Q14202 1370 aa22.25■■□□□ 1.15
PARVB-203ENST00000404989 CDCA8Q53HL2 280 aa22.24■■□□□ 1.15
PARVB-203ENST00000404989 KTN1Q86UP2 1357 aaKnown RBP22.23■■□□□ 1.15
PARVB-203ENST00000404989 PANK3Q9H999 370 aa22.23■■□□□ 1.15
PARVB-203ENST00000404989 MRS2Q9HD23 443 aa22.23■■□□□ 1.15
PARVB-203ENST00000404989 TMEM132EQ6IEE7 984 aa22.22■■□□□ 1.15
PARVB-203ENST00000404989 MYOM1P52179 1685 aa22.21■■□□□ 1.15
PARVB-203ENST00000404989 SBNO2Q9Y2G9 1366 aa22.21■■□□□ 1.15
PARVB-203ENST00000404989 A2ML1A8K2U0 1454 aa22.21■■□□□ 1.15
PARVB-203ENST00000404989 TRHP20396 242 aaPredicted RBP22.21■■□□□ 1.15
PARVB-203ENST00000404989 CNGB1Q14028 1251 aaPredicted RBP22.21■■□□□ 1.15
PARVB-203ENST00000404989 KDM5AP29375 1690 aaKnown RBP22.2■■□□□ 1.14
PARVB-203ENST00000404989 RALBP1Q15311 655 aa22.2■■□□□ 1.14
PARVB-203ENST00000404989 TRAK1Q9UPV9 953 aa22.19■■□□□ 1.14
PARVB-203ENST00000404989 ESF1Q9H501 851 aaKnown RBP22.18■■□□□ 1.14
PARVB-203ENST00000404989 ASXL1Q8IXJ9 1541 aa22.18■■□□□ 1.14
PARVB-203ENST00000404989 CENPJQ9HC77 1338 aaPredicted RBP22.18■■□□□ 1.14
PARVB-203ENST00000404989 QRICH2Q9H0J4 1663 aa22.18■■□□□ 1.14
PARVB-203ENST00000404989 PARD3Q8TEW0 1356 aa22.17■■□□□ 1.14
PARVB-203ENST00000404989 ARHGEF28Q8N1W1 1705 aaKnown RBP22.17■■□□□ 1.14
PARVB-203ENST00000404989 MYBBP1AQ9BQG0 1328 aaKnown RBP22.15■■□□□ 1.14
PARVB-203ENST00000404989 STAG3Q9UJ98 1225 aa22.14■■□□□ 1.13
PARVB-203ENST00000404989 FAM9BQ8IZU0 186 aa22.13■■□□□ 1.13
PARVB-203ENST00000404989 ALKQ9UM73 1620 aa22.12■■□□□ 1.13
PARVB-203ENST00000404989 RIMS2Q9UQ26 1411 aa22.12■■□□□ 1.13
PARVB-203ENST00000404989 HNRNPUQ00839 825 aaKnown RBP eCLIP22.12■■□□□ 1.13
PARVB-203ENST00000404989 BRD4O60885 1362 aaPredicted RBP22.11■■□□□ 1.13
PARVB-203ENST00000404989 TNRQ92752 1358 aa22.11■■□□□ 1.13
PARVB-203ENST00000404989 PNISRQ8TF01 805 aaKnown RBP22.08■■□□□ 1.13
PARVB-203ENST00000404989 CC2D1BQ5T0F9 858 aaKnown RBP22.08■■□□□ 1.12
PARVB-203ENST00000404989 SETD1AO15047 1707 aaKnown RBP22.07■■□□□ 1.12
PARVB-203ENST00000404989 SENP3Q9H4L4 574 aaPredicted RBP22.07■■□□□ 1.12
PARVB-203ENST00000404989 AMER1Q5JTC6 1135 aaPredicted RBP22.06■■□□□ 1.12
PARVB-203ENST00000404989 TMC1Q8TDI8 760 aa22.06■■□□□ 1.12
PARVB-203ENST00000404989 YTHDC2Q9H6S0 1430 aaKnown RBP22.06■■□□□ 1.12
PARVB-203ENST00000404989 UBR1Q8IWV7 1749 aa22.05■■□□□ 1.12
PARVB-203ENST00000404989 PTPRMP28827 1452 aa22.05■■□□□ 1.12
PARVB-203ENST00000404989 KNSTRNQ9Y448 316 aa22.04■■□□□ 1.12
PARVB-203ENST00000404989 C3P01024 1663 aa22.04■■□□□ 1.12
PARVB-203ENST00000404989 TULP4Q9NRJ4 1543 aa22.04■■□□□ 1.12
PARVB-203ENST00000404989 NLRP13Q86W25 1043 aa22.04■■□□□ 1.12
PARVB-203ENST00000404989 NRXN3Q9Y4C0 1643 aa22.03■■□□□ 1.12
PARVB-203ENST00000404989 PUS7Q96PZ0 661 aaKnown RBP22.03■■□□□ 1.12
PARVB-203ENST00000404989 STK26Q9P289 416 aa22.03■■□□□ 1.12
PARVB-203ENST00000404989 FER1L4A9Z1Z3 1794 aa22.03■■□□□ 1.12
PARVB-203ENST00000404989 LRPPRCP42704 1394 aaKnown RBP22.02■■□□□ 1.12
PARVB-203ENST00000404989 NPC1L1Q9UHC9 1359 aa22.02■■□□□ 1.12
PARVB-203ENST00000404989 CEBPAP49715 358 aaPredicted RBP22.01■■□□□ 1.11
PARVB-203ENST00000404989 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.01■■□□□ 1.11
PARVB-203ENST00000404989 CARD14Q9BXL6 1004 aa22.01■■□□□ 1.11
PARVB-203ENST00000404989 EVC2Q86UK5 1308 aa21.98■■□□□ 1.11
PARVB-203ENST00000404989 NLRP1Q9C000 1473 aa21.98■■□□□ 1.11
PARVB-203ENST00000404989 ZBED9Q6R2W3 1325 aa21.97■■□□□ 1.11
PARVB-203ENST00000404989 TMEM2Q9UHN6 1383 aa21.97■■□□□ 1.11
PARVB-203ENST00000404989 DLC1Q96QB1 1528 aa21.96■■□□□ 1.11
PARVB-203ENST00000404989 PRAM1Q96QH2 718 aa21.95■■□□□ 1.11
PARVB-203ENST00000404989 SLC12A5Q9H2X9 1139 aa21.95■■□□□ 1.11
PARVB-203ENST00000404989 SAFB2Q14151 953 aaKnown RBP eCLIP21.95■■□□□ 1.1
PARVB-203ENST00000404989 HDGFP51858 240 aaKnown RBP21.94■■□□□ 1.1
PARVB-203ENST00000404989 PPP2R1AP30153 589 aa21.93■■□□□ 1.1
PARVB-203ENST00000404989 ABCC11Q96J66 1382 aa21.93■■□□□ 1.1
PARVB-203ENST00000404989 CABP2Q9NPB3 220 aa21.91■■□□□ 1.1
PARVB-203ENST00000404989 METP08581 1390 aa21.91■■□□□ 1.1
PARVB-203ENST00000404989 POGKQ9P215 609 aa21.91■■□□□ 1.1
PARVB-203ENST00000404989 MINK1Q8N4C8 1332 aaPredicted RBP21.9■■□□□ 1.1
PARVB-203ENST00000404989 USP32Q8NFA0 1604 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms