RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 NWD1Q149M9 1564 aa19.07■□□□□ 0.64
PRAME-204ENST00000403441 PPP1R15AO75807 674 aaPredicted RBP19.05■□□□□ 0.64
PRAME-204ENST00000403441 GCC2Q8IWJ2 1684 aa19.04■□□□□ 0.64
PRAME-204ENST00000403441 ROBO1Q9Y6N7 1651 aa19.04■□□□□ 0.64
PRAME-204ENST00000403441 MSH6P52701 1360 aa19.04■□□□□ 0.64
PRAME-204ENST00000403441 UNC13BO14795 1591 aa19.03■□□□□ 0.64
PRAME-204ENST00000403441 ZFYVE9O95405 1425 aa19.03■□□□□ 0.64
PRAME-204ENST00000403441 HDGFP51858 240 aaKnown RBP19.03■□□□□ 0.64
PRAME-204ENST00000403441 PLEKHG1Q9ULL1 1385 aa19.03■□□□□ 0.64
PRAME-204ENST00000403441 RBM33Q96EV2 1170 aaKnown RBP19.02■□□□□ 0.64
PRAME-204ENST00000403441 RIMS2Q9UQ26 1411 aa19.01■□□□□ 0.63
PRAME-204ENST00000403441 TMEM131LA2VDJ0 1609 aa19.01■□□□□ 0.63
PRAME-204ENST00000403441 MYO5BQ9ULV0 1848 aa19.01■□□□□ 0.63
PRAME-204ENST00000403441 ROCK1Q13464 1354 aa18.98■□□□□ 0.63
PRAME-204ENST00000403441 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.98■□□□□ 0.63
PRAME-204ENST00000403441 CHGAP10645 457 aaKnown RBP18.97■□□□□ 0.63
PRAME-204ENST00000403441 RGS17Q9UGC6 210 aaPredicted RBP18.97■□□□□ 0.63
PRAME-204ENST00000403441 CHD2O14647 1828 aaKnown RBP18.97■□□□□ 0.63
PRAME-204ENST00000403441 E9PCH4 1651 aa18.96■□□□□ 0.63
PRAME-204ENST00000403441 SLAIN2Q9P270 581 aa18.96■□□□□ 0.63
PRAME-204ENST00000403441 IQGAP3Q86VI3 1631 aa18.96■□□□□ 0.63
PRAME-204ENST00000403441 DIP2AQ14689 1571 aa18.94■□□□□ 0.62
PRAME-204ENST00000403441 TBX22Q9Y458 520 aa18.94■□□□□ 0.62
PRAME-204ENST00000403441 PHLPP1O60346 1717 aa18.94■□□□□ 0.62
PRAME-204ENST00000403441 NCOA3Q9Y6Q9 1424 aa18.92■□□□□ 0.62
PRAME-204ENST00000403441 C14orf37Q86TY3 774 aa18.92■□□□□ 0.62
PRAME-204ENST00000403441 NUP155O75694 1391 aa18.91■□□□□ 0.62
PRAME-204ENST00000403441 PIK3R4Q99570 1358 aa18.9■□□□□ 0.62
PRAME-204ENST00000403441 JCADQ9P266 1359 aa18.9■□□□□ 0.62
PRAME-204ENST00000403441 ADAMTS13Q76LX8 1427 aa18.9■□□□□ 0.62
PRAME-204ENST00000403441 NUTM2DQ5VT03 806 aaPredicted RBP18.89■□□□□ 0.61
PRAME-204ENST00000403441 TRPM2O94759 1503 aa18.89■□□□□ 0.61
PRAME-204ENST00000403441 ITGAEP38570 1179 aa18.87■□□□□ 0.61
PRAME-204ENST00000403441 POTEAQ6S8J7 498 aa18.87■□□□□ 0.61
PRAME-204ENST00000403441 COL16A1Q07092 1604 aaPredicted RBP18.86■□□□□ 0.61
PRAME-204ENST00000403441 ATF3P18847 181 aa18.86■□□□□ 0.61
PRAME-204ENST00000403441 CADPS2Q86UW7 1296 aa18.86■□□□□ 0.61
PRAME-204ENST00000403441 C19orf44Q9H6X5 657 aa18.85■□□□□ 0.61
PRAME-204ENST00000403441 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.84■□□□□ 0.61
PRAME-204ENST00000403441 SPHKAPQ2M3C7 1700 aa18.82■□□□□ 0.6
PRAME-204ENST00000403441 AHDC1Q5TGY3 1603 aaPredicted RBP18.82■□□□□ 0.6
PRAME-204ENST00000403441 SPATA31A6Q5VVP1 1343 aa18.81■□□□□ 0.6
PRAME-204ENST00000403441 AMOTL2Q9Y2J4 779 aa18.81■□□□□ 0.6
PRAME-204ENST00000403441 SETBP1Q9Y6X0 1596 aa18.8■□□□□ 0.6
PRAME-204ENST00000403441 MEX3CQ5U5Q3 659 aaKnown RBP18.79■□□□□ 0.6
PRAME-204ENST00000403441 DCCP43146 1447 aa18.79■□□□□ 0.6
PRAME-204ENST00000403441 PTPRUQ92729 1446 aa18.78■□□□□ 0.6
PRAME-204ENST00000403441 ZNF326Q5BKZ1 582 aaKnown RBP18.78■□□□□ 0.6
PRAME-204ENST00000403441 XRN1Q8IZH2 1706 aaKnown RBP18.77■□□□□ 0.6
PRAME-204ENST00000403441 SHPRHQ149N8 1683 aa18.77■□□□□ 0.6
PRAME-204ENST00000403441 LRP6O75581 1613 aa18.77■□□□□ 0.6
PRAME-204ENST00000403441 NRXN3Q9Y4C0 1643 aa18.77■□□□□ 0.6
PRAME-204ENST00000403441 PPARGC1BQ86YN6 1023 aaKnown RBP18.75■□□□□ 0.59
PRAME-204ENST00000403441 SETD1AO15047 1707 aaKnown RBP18.74■□□□□ 0.59
PRAME-204ENST00000403441 ZNF772Q68DY9 489 aaPredicted RBP18.74■□□□□ 0.59
PRAME-204ENST00000403441 BRINP3Q76B58 766 aa18.74■□□□□ 0.59
PRAME-204ENST00000403441 ASXL1Q8IXJ9 1541 aa18.74■□□□□ 0.59
PRAME-204ENST00000403441 CLTCL1P53675 1640 aa18.72■□□□□ 0.59
PRAME-204ENST00000403441 METP08581 1390 aa18.71■□□□□ 0.59
PRAME-204ENST00000403441 NEXMIFQ5QGS0 1516 aa18.7■□□□□ 0.58
PRAME-204ENST00000403441 MST1RQ04912 1400 aa18.7■□□□□ 0.58
PRAME-204ENST00000403441 ADGRL3Q9HAR2 1447 aa18.69■□□□□ 0.58
PRAME-204ENST00000403441 RRBP1Q9P2E9 1410 aaKnown RBP18.68■□□□□ 0.58
PRAME-204ENST00000403441 KIF1BO60333 1816 aa18.67■□□□□ 0.58
PRAME-204ENST00000403441 NHSL1Q5SYE7 1610 aa18.67■□□□□ 0.58
PRAME-204ENST00000403441 SETD5Q9C0A6 1442 aa18.67■□□□□ 0.58
PRAME-204ENST00000403441 NUTM2BA6NNL0 878 aaPredicted RBP18.67■□□□□ 0.58
PRAME-204ENST00000403441 NUTM2EB1AL46 878 aaPredicted RBP18.67■□□□□ 0.58
PRAME-204ENST00000403441 NUTM2AQ8IVF1 878 aaPredicted RBP18.67■□□□□ 0.58
PRAME-204ENST00000403441 NALCNQ8IZF0 1738 aa18.66■□□□□ 0.58
PRAME-204ENST00000403441 NAIPQ13075 1403 aa18.66■□□□□ 0.58
PRAME-204ENST00000403441 TRIM52Q96A61 297 aa18.65■□□□□ 0.58
PRAME-204ENST00000403441 LRRC59Q96AG4 307 aaKnown RBP18.64■□□□□ 0.57
PRAME-204ENST00000403441 RXRBP28702 533 aa18.63■□□□□ 0.57
PRAME-204ENST00000403441 VGFO15240 615 aaPredicted RBP18.62■□□□□ 0.57
PRAME-204ENST00000403441 PTCH1Q13635 1447 aa18.62■□□□□ 0.57
PRAME-204ENST00000403441 CDK12Q9NYV4 1490 aaPredicted RBP18.61■□□□□ 0.57
PRAME-204ENST00000403441 AFF2P51816 1311 aa18.61■□□□□ 0.57
PRAME-204ENST00000403441 HFM1A2PYH4 1435 aa18.6■□□□□ 0.57
PRAME-204ENST00000403441 PNPLA6Q8IY17 1366 aa18.59■□□□□ 0.57
PRAME-204ENST00000403441 C1orf167Q5SNV9 1468 aa18.58■□□□□ 0.57
PRAME-204ENST00000403441 RPGRIP1LQ68CZ1 1315 aa18.57■□□□□ 0.56
PRAME-204ENST00000403441 DDX17Q92841 729 aaKnown RBP18.57■□□□□ 0.56
PRAME-204ENST00000403441 UPF1Q92900 1129 aaKnown RBP eCLIP18.57■□□□□ 0.56
PRAME-204ENST00000403441 C8orf37Q96NL8 207 aa18.57■□□□□ 0.56
PRAME-204ENST00000403441 PRAG1Q86YV5 1406 aa18.57■□□□□ 0.56
PRAME-204ENST00000403441 ROBO2Q9HCK4 1378 aa18.56■□□□□ 0.56
PRAME-204ENST00000403441 SLC4A1APQ9BWU0 796 aaKnown RBP18.56■□□□□ 0.56
PRAME-204ENST00000403441 LAMC1P11047 1609 aa18.55■□□□□ 0.56
PRAME-204ENST00000403441 PPLO60437 1756 aa18.54■□□□□ 0.56
PRAME-204ENST00000403441 ADAMTS2O95450 1211 aa18.5■□□□□ 0.55
PRAME-204ENST00000403441 RBM6P78332 1123 aaKnown RBP18.5■□□□□ 0.55
PRAME-204ENST00000403441 NGLY1Q96IV0 654 aa18.5■□□□□ 0.55
PRAME-204ENST00000403441 ORAI2Q96SN7 254 aa18.5■□□□□ 0.55
PRAME-204ENST00000403441 QTRT2Q9H974 415 aaKnown RBP18.5■□□□□ 0.55
PRAME-204ENST00000403441 SOS2Q07890 1332 aaPredicted RBP18.49■□□□□ 0.55
PRAME-204ENST00000403441 RGS12O14924 1447 aa18.49■□□□□ 0.55
PRAME-204ENST00000403441 CDC42BPGQ6DT37 1551 aa18.49■□□□□ 0.55
PRAME-204ENST00000403441 CCDC144AA2RUR9 1427 aa18.48■□□□□ 0.55
PRAME-204ENST00000403441 COL22A1Q8NFW1 1626 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms