RNA–Protein interactions for RNA: ENST00000400634.2

RSPO4-202, Transcript of R-spondin 4, humanhuman

TSL 1 (best) BASIC

Gene RSPO4, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4-202ENST00000400634 PPP1R15AO75807 674 aaPredicted RBP36.33■■■■□ 3.41
RSPO4-202ENST00000400634 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.33■■■■□ 3.41
RSPO4-202ENST00000400634 BCANQ96GW7 911 aa36.31■■■■□ 3.4
RSPO4-202ENST00000400634 PLEKHG1Q9ULL1 1385 aa36.3■■■■□ 3.4
RSPO4-202ENST00000400634 TRIM52Q96A61 297 aa36.3■■■■□ 3.4
RSPO4-202ENST00000400634 SLC26A8Q96RN1 970 aa36.28■■■■□ 3.4
RSPO4-202ENST00000400634 TRPM2O94759 1503 aa36.25■■■■□ 3.39
RSPO4-202ENST00000400634 KCNA6P17658 529 aa36.24■■■■□ 3.39
RSPO4-202ENST00000400634 XIRP1Q702N8 1843 aaKnown RBP36.21■■■■□ 3.39
RSPO4-202ENST00000400634 KIF1BO60333 1816 aa36.2■■■■□ 3.39
RSPO4-202ENST00000400634 SLC4A1APQ9BWU0 796 aaKnown RBP36.2■■■■□ 3.39
RSPO4-202ENST00000400634 CLTCL1P53675 1640 aa36.19■■■■□ 3.38
RSPO4-202ENST00000400634 NWD1Q149M9 1564 aa36.19■■■■□ 3.38
RSPO4-202ENST00000400634 SCAF1Q9H7N4 1312 aaKnown RBP36.19■■■■□ 3.38
RSPO4-202ENST00000400634 PIP4K2BP78356 416 aa36.18■■■■□ 3.38
RSPO4-202ENST00000400634 CHD2O14647 1828 aaKnown RBP36.18■■■■□ 3.38
RSPO4-202ENST00000400634 NKTRP30414 1462 aaKnown RBP36.17■■■■□ 3.38
RSPO4-202ENST00000400634 DIP2AQ14689 1571 aa36.16■■■■□ 3.38
RSPO4-202ENST00000400634 TBX22Q9Y458 520 aa36.15■■■■□ 3.38
RSPO4-202ENST00000400634 ACIN1Q9UKV3 1341 aaKnown RBP36.14■■■■□ 3.38
RSPO4-202ENST00000400634 ALKQ9UM73 1620 aa36.14■■■■□ 3.38
RSPO4-202ENST00000400634 NUTM2DQ5VT03 806 aaPredicted RBP36.13■■■■□ 3.37
RSPO4-202ENST00000400634 ZNF326Q5BKZ1 582 aaKnown RBP36.12■■■■□ 3.37
RSPO4-202ENST00000400634 SENP3Q9H4L4 574 aaPredicted RBP36.11■■■■□ 3.37
RSPO4-202ENST00000400634 ADAMTS13Q76LX8 1427 aa36.09■■■■□ 3.37
RSPO4-202ENST00000400634 PROSER2Q86WR7 435 aaPredicted RBP36.09■■■■□ 3.37
RSPO4-202ENST00000400634 TMEM94Q12767 1356 aa36.09■■■■□ 3.37
RSPO4-202ENST00000400634 PIK3R4Q99570 1358 aa36.07■■■■□ 3.36
RSPO4-202ENST00000400634 SETD5Q9C0A6 1442 aa36.03■■■■□ 3.36
RSPO4-202ENST00000400634 SETBP1Q9Y6X0 1596 aa36.02■■■■□ 3.36
RSPO4-202ENST00000400634 NEXMIFQ5QGS0 1516 aa36.02■■■■□ 3.36
RSPO4-202ENST00000400634 HSPA1LP34931 641 aa36■■■■□ 3.35
RSPO4-202ENST00000400634 NRXN3Q9Y4C0 1643 aa35.98■■■■□ 3.35
RSPO4-202ENST00000400634 MPHOSPH9Q99550 1183 aa35.98■■■■□ 3.35
RSPO4-202ENST00000400634 MSH6P52701 1360 aa35.95■■■■□ 3.35
RSPO4-202ENST00000400634 NCOA3Q9Y6Q9 1424 aa35.93■■■■□ 3.34
RSPO4-202ENST00000400634 RPGRIP1LQ68CZ1 1315 aa35.92■■■■□ 3.34
RSPO4-202ENST00000400634 FOXD1Q16676 465 aa35.92■■■■□ 3.34
RSPO4-202ENST00000400634 RBM33Q96EV2 1170 aaKnown RBP35.92■■■■□ 3.34
RSPO4-202ENST00000400634 CCDC144AA2RUR9 1427 aa35.91■■■■□ 3.34
RSPO4-202ENST00000400634 DISP3Q9P2K9 1392 aa35.9■■■■□ 3.34
RSPO4-202ENST00000400634 VGFO15240 615 aaPredicted RBP35.89■■■■□ 3.34
RSPO4-202ENST00000400634 PPLO60437 1756 aa35.88■■■■□ 3.33
RSPO4-202ENST00000400634 AMOTL2Q9Y2J4 779 aa35.87■■■■□ 3.33
RSPO4-202ENST00000400634 RAB3GAP2Q9H2M9 1393 aa35.87■■■■□ 3.33
RSPO4-202ENST00000400634 FAM135BQ49AJ0 1406 aa35.86■■■■□ 3.33
RSPO4-202ENST00000400634 XRN1Q8IZH2 1706 aaKnown RBP35.85■■■■□ 3.33
RSPO4-202ENST00000400634 PTPRUQ92729 1446 aa35.84■■■■□ 3.33
RSPO4-202ENST00000400634 C14orf37Q86TY3 774 aa35.82■■■■□ 3.32
RSPO4-202ENST00000400634 ROBO1Q9Y6N7 1651 aa35.8■■■■□ 3.32
RSPO4-202ENST00000400634 METP08581 1390 aa35.79■■■■□ 3.32
RSPO4-202ENST00000400634 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.77■■■■□ 3.32
RSPO4-202ENST00000400634 C19orf44Q9H6X5 657 aa35.76■■■■□ 3.32
RSPO4-202ENST00000400634 SPATA31E1Q6ZUB1 1445 aa35.75■■■■□ 3.31
RSPO4-202ENST00000400634 SETD1AO15047 1707 aaKnown RBP35.75■■■■□ 3.31
RSPO4-202ENST00000400634 SLAIN2Q9P270 581 aa35.75■■■■□ 3.31
RSPO4-202ENST00000400634 CADPS2Q86UW7 1296 aa35.73■■■■□ 3.31
RSPO4-202ENST00000400634 IFT172Q9UG01 1749 aa35.72■■■■□ 3.31
RSPO4-202ENST00000400634 HRCP23327 699 aa35.72■■■■□ 3.31
RSPO4-202ENST00000400634 ATF3P18847 181 aa35.71■■■■□ 3.31
RSPO4-202ENST00000400634 MED1Q15648 1581 aaPredicted RBP35.7■■■■□ 3.31
RSPO4-202ENST00000400634 ANKRD30BQ9BXX2 1392 aa35.7■■■■□ 3.31
RSPO4-202ENST00000400634 RGL3Q3MIN7 710 aa35.69■■■■□ 3.3
RSPO4-202ENST00000400634 DCCP43146 1447 aa35.67■■■■□ 3.3
RSPO4-202ENST00000400634 PTCH1Q13635 1447 aa35.62■■■■□ 3.29
RSPO4-202ENST00000400634 PHLPP1O60346 1717 aa35.6■■■■□ 3.29
RSPO4-202ENST00000400634 PRAG1Q86YV5 1406 aa35.6■■■■□ 3.29
RSPO4-202ENST00000400634 ADGRF5Q8IZF2 1346 aa35.59■■■■□ 3.29
RSPO4-202ENST00000400634 ADGRL3Q9HAR2 1447 aa35.58■■■■□ 3.29
RSPO4-202ENST00000400634 NALCNQ8IZF0 1738 aa35.57■■■■□ 3.28
RSPO4-202ENST00000400634 PIK3C2GO75747 1445 aa35.53■■■■□ 3.28
RSPO4-202ENST00000400634 ILDR2Q71H61 639 aa35.52■■■■□ 3.28
RSPO4-202ENST00000400634 ROBO2Q9HCK4 1378 aa35.51■■■■□ 3.28
RSPO4-202ENST00000400634 AHDC1Q5TGY3 1603 aaPredicted RBP35.49■■■■□ 3.27
RSPO4-202ENST00000400634 MYOM2P54296 1465 aa35.48■■■■□ 3.27
RSPO4-202ENST00000400634 PHF23Q9BUL5 403 aaPredicted RBP35.48■■■■□ 3.27
RSPO4-202ENST00000400634 MST1RQ04912 1400 aa35.48■■■■□ 3.27
RSPO4-202ENST00000400634 COL16A1Q07092 1604 aaPredicted RBP35.47■■■■□ 3.27
RSPO4-202ENST00000400634 NRXN1Q9ULB1 1477 aa35.45■■■■□ 3.27
RSPO4-202ENST00000400634 LAMC1P11047 1609 aa35.45■■■■□ 3.27
RSPO4-202ENST00000400634 KNDC1Q76NI1 1749 aa35.44■■■■□ 3.26
RSPO4-202ENST00000400634 BRINP3Q76B58 766 aa35.44■■■■□ 3.26
RSPO4-202ENST00000400634 JCADQ9P266 1359 aa35.43■■■■□ 3.26
RSPO4-202ENST00000400634 TECPR2O15040 1411 aa35.42■■■■□ 3.26
RSPO4-202ENST00000400634 LRPPRCP42704 1394 aaKnown RBP35.42■■■■□ 3.26
RSPO4-202ENST00000400634 ASXL1Q8IXJ9 1541 aa35.42■■■■□ 3.26
RSPO4-202ENST00000400634 ABCC11Q96J66 1382 aa35.38■■■■□ 3.26
RSPO4-202ENST00000400634 C14orf93Q9H972 538 aaKnown RBP35.38■■■■□ 3.25
RSPO4-202ENST00000400634 NHSL1Q5SYE7 1610 aa35.37■■■■□ 3.25
RSPO4-202ENST00000400634 TMEM132EQ6IEE7 984 aa35.36■■■■□ 3.25
RSPO4-202ENST00000400634 STK26Q9P289 416 aa35.36■■■■□ 3.25
RSPO4-202ENST00000400634 YTHDC2Q9H6S0 1430 aaKnown RBP35.35■■■■□ 3.25
RSPO4-202ENST00000400634 STAC3Q96MF2 364 aa35.34■■■■□ 3.25
RSPO4-202ENST00000400634 C1orf167Q5SNV9 1468 aa35.33■■■■□ 3.25
RSPO4-202ENST00000400634 CDC42BPGQ6DT37 1551 aa35.33■■■■□ 3.25
RSPO4-202ENST00000400634 SHPRHQ149N8 1683 aa35.32■■■■□ 3.24
RSPO4-202ENST00000400634 DHX57Q6P158 1386 aaKnown RBP35.3■■■■□ 3.24
RSPO4-202ENST00000400634 CFAP70Q5T0N1 1121 aa35.3■■■■□ 3.24
RSPO4-202ENST00000400634 SOCS7O14512 581 aa35.29■■■■□ 3.24
RSPO4-202ENST00000400634 SPATA31A6Q5VVP1 1343 aa35.28■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms