RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 CDC42BPAQ5VT25 1732 aa16.4■□□□□ 0.22
PPP4R1-202ENST00000400555 WASHC2CQ9Y4E1 1318 aa16.39■□□□□ 0.21
PPP4R1-202ENST00000400555 MS4A1P11836 297 aa16.39■□□□□ 0.21
PPP4R1-202ENST00000400555 ARHGEF12Q9NZN5 1544 aa16.38■□□□□ 0.21
PPP4R1-202ENST00000400555 CENPQQ7L2Z9 268 aaPredicted RBP16.38■□□□□ 0.21
PPP4R1-202ENST00000400555 SHANK2Q9UPX8 1470 aa16.38■□□□□ 0.21
PPP4R1-202ENST00000400555 SLKQ9H2G2 1235 aaPredicted RBP16.38■□□□□ 0.21
PPP4R1-202ENST00000400555 IL27Q8NEV9 243 aa16.37■□□□□ 0.21
PPP4R1-202ENST00000400555 ABCA8O94911 1581 aa16.37■□□□□ 0.21
PPP4R1-202ENST00000400555 SLFN5Q08AF3 891 aa16.37■□□□□ 0.21
PPP4R1-202ENST00000400555 CENPJQ9HC77 1338 aaPredicted RBP16.37■□□□□ 0.21
PPP4R1-202ENST00000400555 SAMD9LQ8IVG5 1584 aa16.36■□□□□ 0.21
PPP4R1-202ENST00000400555 SRPK2P78362 688 aaKnown RBP16.36■□□□□ 0.21
PPP4R1-202ENST00000400555 CARD14Q9BXL6 1004 aa16.35■□□□□ 0.21
PPP4R1-202ENST00000400555 FAM161AQ3B820 660 aa16.35■□□□□ 0.21
PPP4R1-202ENST00000400555 STAG3Q9UJ98 1225 aa16.35■□□□□ 0.21
PPP4R1-202ENST00000400555 MTHFSP49914 203 aa16.34■□□□□ 0.21
PPP4R1-202ENST00000400555 COL17A1Q9UMD9 1497 aaPredicted RBP16.34■□□□□ 0.21
PPP4R1-202ENST00000400555 CABP2Q9NPB3 220 aa16.33■□□□□ 0.21
PPP4R1-202ENST00000400555 TNNQ9UQP3 1299 aa16.33■□□□□ 0.21
PPP4R1-202ENST00000400555 EIF3AQ14152 1382 aaKnown RBP16.33■□□□□ 0.2
PPP4R1-202ENST00000400555 E9PSI1 815 aa16.33■□□□□ 0.2
PPP4R1-202ENST00000400555 TCP11L2Q8N4U5 519 aa16.33■□□□□ 0.2
PPP4R1-202ENST00000400555 CFAP53Q96M91 514 aa16.32■□□□□ 0.2
PPP4R1-202ENST00000400555 MAGI2Q86UL8 1455 aa16.32■□□□□ 0.2
PPP4R1-202ENST00000400555 FTSJ3Q8IY81 847 aaKnown RBP16.32■□□□□ 0.2
PPP4R1-202ENST00000400555 IGHDP01880 384 aa16.31■□□□□ 0.2
PPP4R1-202ENST00000400555 ERCC6L2Q5T890 1561 aa16.31■□□□□ 0.2
PPP4R1-202ENST00000400555 KDM5DQ9BY66 1539 aa16.31■□□□□ 0.2
PPP4R1-202ENST00000400555 NFKBIBQ15653 356 aa16.3■□□□□ 0.2
PPP4R1-202ENST00000400555 PLPPR3Q6T4P5 718 aa16.3■□□□□ 0.2
PPP4R1-202ENST00000400555 GGNBP2Q9H3C7 697 aa16.29■□□□□ 0.2
PPP4R1-202ENST00000400555 TTC37Q6PGP7 1564 aa16.29■□□□□ 0.2
PPP4R1-202ENST00000400555 POGKQ9P215 609 aa16.29■□□□□ 0.2
PPP4R1-202ENST00000400555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.29■□□□□ 0.2
PPP4R1-202ENST00000400555 WWC1Q8IX03 1113 aa16.28■□□□□ 0.2
PPP4R1-202ENST00000400555 TSR2Q969E8 191 aaKnown RBP16.28■□□□□ 0.2
PPP4R1-202ENST00000400555 GPRASP1Q5JY77 1395 aa16.28■□□□□ 0.2
PPP4R1-202ENST00000400555 RAPGEF3O95398 923 aa16.27■□□□□ 0.2
PPP4R1-202ENST00000400555 PLCH2O75038 1416 aa16.27■□□□□ 0.2
PPP4R1-202ENST00000400555 MINK1Q8N4C8 1332 aaPredicted RBP16.27■□□□□ 0.2
PPP4R1-202ENST00000400555 CROCC2H7BZ55 1655 aa16.27■□□□□ 0.2
PPP4R1-202ENST00000400555 FRAT2O75474 233 aaPredicted RBP16.27■□□□□ 0.19
PPP4R1-202ENST00000400555 MLECQ14165 292 aa16.26■□□□□ 0.19
PPP4R1-202ENST00000400555 UPF2Q9HAU5 1272 aaKnown RBP16.26■□□□□ 0.19
PPP4R1-202ENST00000400555 BRPF3Q9ULD4 1205 aa16.25■□□□□ 0.19
PPP4R1-202ENST00000400555 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.24■□□□□ 0.198e-7■■■□□ 19
PPP4R1-202ENST00000400555 ADCY10Q96PN6 1610 aa16.24■□□□□ 0.19
PPP4R1-202ENST00000400555 ELL2O00472 640 aaPredicted RBP16.24■□□□□ 0.19
PPP4R1-202ENST00000400555 FBLN1P23142 703 aa16.24■□□□□ 0.19
PPP4R1-202ENST00000400555 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.24■□□□□ 0.19
PPP4R1-202ENST00000400555 SCAF11Q99590 1463 aaKnown RBP16.24■□□□□ 0.19
PPP4R1-202ENST00000400555 SMC4Q9NTJ3 1288 aa16.23■□□□□ 0.19
PPP4R1-202ENST00000400555 ITPRIPQ8IWB1 547 aa16.23■□□□□ 0.19
PPP4R1-202ENST00000400555 MAPK8IP3Q9UPT6 1336 aa16.23■□□□□ 0.19
PPP4R1-202ENST00000400555 RUNDC1Q96C34 613 aa16.23■□□□□ 0.19
PPP4R1-202ENST00000400555 CFAP65Q6ZU64 1925 aaKnown RBP16.23■□□□□ 0.19
PPP4R1-202ENST00000400555 C8orf34Q49A92 452 aa16.22■□□□□ 0.19
PPP4R1-202ENST00000400555 CDC42BPBQ9Y5S2 1711 aa16.22■□□□□ 0.19
PPP4R1-202ENST00000400555 DUOX2Q9NRD8 1548 aa16.22■□□□□ 0.19
PPP4R1-202ENST00000400555 SEC24BO95487 1268 aa16.22■□□□□ 0.19
PPP4R1-202ENST00000400555 ARHGEF5Q12774 1597 aa16.22■□□□□ 0.19
PPP4R1-202ENST00000400555 NSD3Q9BZ95 1437 aa16.22■□□□□ 0.19
PPP4R1-202ENST00000400555 POLR1AO95602 1720 aaPredicted RBP16.21■□□□□ 0.19
PPP4R1-202ENST00000400555 BLMP54132 1417 aaPredicted RBP16.21■□□□□ 0.19
PPP4R1-202ENST00000400555 WDR7Q9Y4E6 1490 aa16.21■□□□□ 0.18
PPP4R1-202ENST00000400555 EIF5BO60841 1220 aaKnown RBP16.2■□□□□ 0.18
PPP4R1-202ENST00000400555 RLBP1P12271 317 aa16.2■□□□□ 0.18
PPP4R1-202ENST00000400555 CGNL1Q0VF96 1302 aa16.2■□□□□ 0.18
PPP4R1-202ENST00000400555 UGGT1Q9NYU2 1555 aa16.2■□□□□ 0.18
PPP4R1-202ENST00000400555 MFAP1P55081 439 aaKnown RBP16.2■□□□□ 0.18
PPP4R1-202ENST00000400555 SOX12O15370 315 aa16.2■□□□□ 0.18
PPP4R1-202ENST00000400555 GSE1Q14687 1217 aa16.2■□□□□ 0.18
PPP4R1-202ENST00000400555 GZF1Q9H116 711 aaPredicted RBP16.2■□□□□ 0.18
PPP4R1-202ENST00000400555 KDM2BQ8NHM5 1336 aa16.19■□□□□ 0.18
PPP4R1-202ENST00000400555 NOS1P29475 1434 aa16.19■□□□□ 0.18
PPP4R1-202ENST00000400555 TRPM1Q7Z4N2 1603 aa16.19■□□□□ 0.18
PPP4R1-202ENST00000400555 BECN1Q14457 450 aa16.18■□□□□ 0.18
PPP4R1-202ENST00000400555 PDZRN3Q9UPQ7 1066 aa16.18■□□□□ 0.18
PPP4R1-202ENST00000400555 PCDHB15Q9Y5E8 787 aa16.18■□□□□ 0.18
PPP4R1-202ENST00000400555 SLC24A1O60721 1099 aa16.17■□□□□ 0.18
PPP4R1-202ENST00000400555 RARSP54136 660 aaKnown RBP16.17■□□□□ 0.18
PPP4R1-202ENST00000400555 EXOSC9Q06265 439 aaKnown RBP16.17■□□□□ 0.18
PPP4R1-202ENST00000400555 ASXL1Q8IXJ9 1541 aa16.17■□□□□ 0.18
PPP4R1-202ENST00000400555 FANCAO15360 1455 aa16.17■□□□□ 0.18
PPP4R1-202ENST00000400555 PREX2Q70Z35 1606 aa16.17■□□□□ 0.18
PPP4R1-202ENST00000400555 ZMYM4Q5VZL5 1548 aa16.16■□□□□ 0.18
PPP4R1-202ENST00000400555 NUTM2FA1L443 756 aa16.16■□□□□ 0.18
PPP4R1-202ENST00000400555 MYH16Q9H6N6 1097 aa16.16■□□□□ 0.18
PPP4R1-202ENST00000400555 NKTRP30414 1462 aaKnown RBP16.16■□□□□ 0.18
PPP4R1-202ENST00000400555 USP35Q9P2H5 1018 aa16.16■□□□□ 0.18
PPP4R1-202ENST00000400555 ADGRL1O94910 1474 aa16.15■□□□□ 0.18
PPP4R1-202ENST00000400555 ABCC2Q92887 1545 aa16.15■□□□□ 0.18
PPP4R1-202ENST00000400555 EVC2Q86UK5 1308 aa16.15■□□□□ 0.18
PPP4R1-202ENST00000400555 ZNF521Q96K83 1311 aa16.15■□□□□ 0.18
PPP4R1-202ENST00000400555 RWDD1Q9H446 243 aaPredicted RBP16.15■□□□□ 0.18
PPP4R1-202ENST00000400555 ATP10AO60312 1499 aa16.15■□□□□ 0.18
PPP4R1-202ENST00000400555 PRDM15P57071 1507 aaPredicted RBP16.15■□□□□ 0.18
PPP4R1-202ENST00000400555 HMOX1P09601 288 aa16.14■□□□□ 0.17
PPP4R1-202ENST00000400555 STAC3Q96MF2 364 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms