RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 GPRASP1Q5JY77 1395 aa6.11□□□□□ -1.43
TTC3-204ENST00000399017 APPP05067 770 aa6.11□□□□□ -1.43
TTC3-204ENST00000399017 SSFA2P28290 1259 aa6.11□□□□□ -1.43
TTC3-204ENST00000399017 ZNF287Q9HBT7 754 aa6.11□□□□□ -1.43
TTC3-204ENST00000399017 GNL3LQ9NVN8 582 aaKnown RBP6.11□□□□□ -1.43
TTC3-204ENST00000399017 ERC1Q8IUD2 1116 aa6.1□□□□□ -1.43
TTC3-204ENST00000399017 MFAP1P55081 439 aaKnown RBP6.1□□□□□ -1.43
TTC3-204ENST00000399017 SAFBQ15424 915 aaKnown RBP eCLIP6.1□□□□□ -1.43
TTC3-204ENST00000399017 RUFY2Q8WXA3 655 aa6.1□□□□□ -1.43
TTC3-204ENST00000399017 PRKCSHP14314 528 aaPredicted RBP6.1□□□□□ -1.43
TTC3-204ENST00000399017 SAFB2Q14151 953 aaKnown RBP eCLIP6.1□□□□□ -1.43
TTC3-204ENST00000399017 HMGB1P1B2RPK0 211 aaPredicted RBP6.1□□□□□ -1.43
TTC3-204ENST00000399017 SART3Q15020 963 aaKnown RBP6.1□□□□□ -1.43
TTC3-204ENST00000399017 TMOD2Q9NZR1 351 aa6.1□□□□□ -1.43
TTC3-204ENST00000399017 PIP4K2BP78356 416 aa6.09□□□□□ -1.43
TTC3-204ENST00000399017 MYCNP04198 464 aaPredicted RBP6.09□□□□□ -1.43
TTC3-204ENST00000399017 RNF20Q5VTR2 975 aa6.09□□□□□ -1.43
TTC3-204ENST00000399017 GBP4Q96PP9 640 aa6.09□□□□□ -1.43
TTC3-204ENST00000399017 GOLGA6L19H0YKK7 550 aa6.09□□□□□ -1.43
TTC3-204ENST00000399017 CENPJQ9HC77 1338 aaPredicted RBP6.09□□□□□ -1.43
TTC3-204ENST00000399017 NEBLO76041 1014 aa6.09□□□□□ -1.43
TTC3-204ENST00000399017 COG3Q96JB2 828 aa6.09□□□□□ -1.43
TTC3-204ENST00000399017 SEPT11Q9NVA2 429 aaKnown RBP6.09□□□□□ -1.43
TTC3-204ENST00000399017 AMER1Q5JTC6 1135 aaPredicted RBP6.09□□□□□ -1.43
TTC3-204ENST00000399017 NUTM2BA6NNL0 878 aaPredicted RBP6.09□□□□□ -1.44
TTC3-204ENST00000399017 NUTM2EB1AL46 878 aaPredicted RBP6.09□□□□□ -1.44
TTC3-204ENST00000399017 NUTM2DQ5VT03 806 aaPredicted RBP6.09□□□□□ -1.44
TTC3-204ENST00000399017 NUTM2AQ8IVF1 878 aaPredicted RBP6.09□□□□□ -1.44
TTC3-204ENST00000399017 MIA2Q96PC5 1412 aa6.08□□□□□ -1.44
TTC3-204ENST00000399017 PPP4R3AQ6IN85 833 aa6.08□□□□□ -1.44
TTC3-204ENST00000399017 PCMTD1Q96MG8 357 aaPredicted RBP6.08□□□□□ -1.44
TTC3-204ENST00000399017 ZNF652Q9Y2D9 606 aa6.08□□□□□ -1.44
TTC3-204ENST00000399017 ST18O60284 1047 aa6.08□□□□□ -1.44
TTC3-204ENST00000399017 RALBP1Q15311 655 aa6.08□□□□□ -1.44
TTC3-204ENST00000399017 CEP164Q9UPV0 1460 aa6.08□□□□□ -1.44
TTC3-204ENST00000399017 FMN1Q68DA7 1419 aa6.08□□□□□ -1.44
TTC3-204ENST00000399017 HOMER2Q9NSB8 354 aa6.08□□□□□ -1.44
TTC3-204ENST00000399017 KIF3BO15066 747 aa6.08□□□□□ -1.44
TTC3-204ENST00000399017 NOC2LQ9Y3T9 749 aaKnown RBP6.08□□□□□ -1.44
TTC3-204ENST00000399017 HSP90AB2PQ58FF8 381 aa6.08□□□□□ -1.44
TTC3-204ENST00000399017 TXLNAP40222 546 aa6.07□□□□□ -1.44
TTC3-204ENST00000399017 MYO9BQ13459 2157 aa6.07□□□□□ -1.44
TTC3-204ENST00000399017 HMGB3O15347 200 aaKnown RBP6.07□□□□□ -1.44
TTC3-204ENST00000399017 KCNA4P22459 653 aa6.07□□□□□ -1.44
TTC3-204ENST00000399017 TNIP1Q15025 636 aa6.07□□□□□ -1.44
TTC3-204ENST00000399017 CAGE1Q8TC20 777 aa6.07□□□□□ -1.44
TTC3-204ENST00000399017 PHLDB1Q86UU1 1377 aa6.07□□□□□ -1.44
TTC3-204ENST00000399017 PMFBP1Q8TBY8 1022 aa6.07□□□□□ -1.44
TTC3-204ENST00000399017 ANKRD30AQ9BXX3 1397 aa6.07□□□□□ -1.44
TTC3-204ENST00000399017 LUC7LQ9NQ29 371 aaKnown RBP6.07□□□□□ -1.44
TTC3-204ENST00000399017 CBX1P83916 185 aa6.07□□□□□ -1.44
TTC3-204ENST00000399017 OFD1O75665 1012 aa6.07□□□□□ -1.44
TTC3-204ENST00000399017 U2AF1L5P0DN76 240 aaPredicted RBP6.07□□□□□ -1.44
TTC3-204ENST00000399017 U2AF1Q01081 240 aaKnown RBP eCLIP6.07□□□□□ -1.44
TTC3-204ENST00000399017 EVC2Q86UK5 1308 aa6.07□□□□□ -1.44
TTC3-204ENST00000399017 CECR2Q9BXF3 1484 aa6.07□□□□□ -1.44
TTC3-204ENST00000399017 CPLX1O14810 134 aa6.06□□□□□ -1.44
TTC3-204ENST00000399017 TTLL12Q14166 644 aaPredicted RBP6.06□□□□□ -1.44
TTC3-204ENST00000399017 SAMD1Q6SPF0 538 aaPredicted RBP6.06□□□□□ -1.44
TTC3-204ENST00000399017 ROCK2O75116 1388 aaKnown RBP6.06□□□□□ -1.44
TTC3-204ENST00000399017 TXLNBQ8N3L3 684 aa6.06□□□□□ -1.44
TTC3-204ENST00000399017 TBC1D2BQ9UPU7 963 aa6.06□□□□□ -1.44
TTC3-204ENST00000399017 TCERG1O14776 1098 aaKnown RBP6.06□□□□□ -1.44
TTC3-204ENST00000399017 THEMISQ8N1K5 641 aaPredicted RBP6.06□□□□□ -1.44
TTC3-204ENST00000399017 ZKSCAN1P17029 563 aaPredicted RBP6.06□□□□□ -1.44
TTC3-204ENST00000399017 BMS1Q14692 1282 aaKnown RBP6.06□□□□□ -1.44
TTC3-204ENST00000399017 SLC4A10Q6U841 1118 aa6.06□□□□□ -1.44
TTC3-204ENST00000399017 RBM5P52756 815 aaKnown RBP eCLIP6.06□□□□□ -1.448e-6■■■□□ 16.3
TTC3-204ENST00000399017 ARHGAP35Q9NRY4 1499 aa6.06□□□□□ -1.44
TTC3-204ENST00000399017 LTV1Q96GA3 475 aaPredicted RBP6.05□□□□□ -1.44
TTC3-204ENST00000399017 CCDC27Q2M243 656 aa6.05□□□□□ -1.44
TTC3-204ENST00000399017 RALYLQ86SE5 291 aaKnown RBP6.05□□□□□ -1.44
TTC3-204ENST00000399017 KTN1Q86UP2 1357 aaKnown RBP6.05□□□□□ -1.44
TTC3-204ENST00000399017 FAM69CQ0P6D2 419 aa6.05□□□□□ -1.44
TTC3-204ENST00000399017 RBM27Q9P2N5 1060 aaKnown RBP6.05□□□□□ -1.44
TTC3-204ENST00000399017 CDK5RAP3Q96JB5 506 aa6.05□□□□□ -1.44
TTC3-204ENST00000399017 RWDD1Q9H446 243 aaPredicted RBP6.05□□□□□ -1.44
TTC3-204ENST00000399017 MYO1BO43795 1136 aa6.05□□□□□ -1.44
TTC3-204ENST00000399017 TRIM22Q8IYM9 498 aa6.05□□□□□ -1.44
TTC3-204ENST00000399017 ZNHIT6Q9NWK9 470 aaKnown RBP6.05□□□□□ -1.44
TTC3-204ENST00000399017 CALRP27797 417 aaKnown RBP6.05□□□□□ -1.44
TTC3-204ENST00000399017 LRRC45Q96CN5 670 aa6.05□□□□□ -1.44
TTC3-204ENST00000399017 KIF4AO95239 1232 aa6.05□□□□□ -1.44
TTC3-204ENST00000399017 CA8P35219 290 aa6.05□□□□□ -1.44
TTC3-204ENST00000399017 DCTN1Q14203 1278 aa6.05□□□□□ -1.44
TTC3-204ENST00000399017 PABPN1LA6NDY0 278 aaKnown RBP6.05□□□□□ -1.44
TTC3-204ENST00000399017 CC2D1BQ5T0F9 858 aaKnown RBP6.04□□□□□ -1.44
TTC3-204ENST00000399017 NFXL1Q6ZNB6 911 aa6.04□□□□□ -1.44
TTC3-204ENST00000399017 DHX37Q8IY37 1157 aaKnown RBP6.04□□□□□ -1.44
TTC3-204ENST00000399017 CCDC150Q8NCX0 1101 aa6.04□□□□□ -1.44
TTC3-204ENST00000399017 RAB3GAP2Q9H2M9 1393 aa6.04□□□□□ -1.44
TTC3-204ENST00000399017 DEF6Q9H4E7 631 aa6.04□□□□□ -1.44
TTC3-204ENST00000399017 UQCRHLA0A096LP55 91 aa6.04□□□□□ -1.44
TTC3-204ENST00000399017 NF2P35240 595 aa6.04□□□□□ -1.44
TTC3-204ENST00000399017 ZBTB24O43167 697 aaPredicted RBP6.04□□□□□ -1.44
TTC3-204ENST00000399017 RUFY1Q96T51 708 aa6.04□□□□□ -1.44
TTC3-204ENST00000399017 POTEJP0CG39 1038 aa6.04□□□□□ -1.44
TTC3-204ENST00000399017 SEPT7Q16181 437 aaKnown RBP6.03□□□□□ -1.44
TTC3-204ENST00000399017 CCDC82Q8N4S0 544 aa6.03□□□□□ -1.44
TTC3-204ENST00000399017 CGNL1Q0VF96 1302 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms