RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 POLR1AO95602 1720 aaPredicted RBP14.64□□□□□ -0.07
MSL3-207ENST00000398527 NEURL4Q96JN8 1562 aa14.63□□□□□ -0.07
MSL3-207ENST00000398527 PPP1R15AO75807 674 aaPredicted RBP14.63□□□□□ -0.07
MSL3-207ENST00000398527 A2ML1A8K2U0 1454 aa14.63□□□□□ -0.07
MSL3-207ENST00000398527 CDC42BPBQ9Y5S2 1711 aa14.63□□□□□ -0.07
MSL3-207ENST00000398527 DNMT1P26358 1616 aaKnown RBP14.62□□□□□ -0.07
MSL3-207ENST00000398527 CHRM1P11229 460 aaPredicted RBP14.62□□□□□ -0.07
MSL3-207ENST00000398527 VWDEQ8N2E2 1590 aa14.62□□□□□ -0.07
MSL3-207ENST00000398527 YTHDC1Q96MU7 727 aaKnown RBP14.61□□□□□ -0.07
MSL3-207ENST00000398527 TROQ12816 1431 aaPredicted RBP14.61□□□□□ -0.07
MSL3-207ENST00000398527 SECISBP2LQ93073 1101 aaKnown RBP14.6□□□□□ -0.07
MSL3-207ENST00000398527 KDM2AQ9Y2K7 1162 aa14.6□□□□□ -0.07
MSL3-207ENST00000398527 PRDM10Q9NQV6 1147 aa14.59□□□□□ -0.07
MSL3-207ENST00000398527 PREX2Q70Z35 1606 aa14.59□□□□□ -0.07
MSL3-207ENST00000398527 ZNF592Q92610 1267 aa14.58□□□□□ -0.08
MSL3-207ENST00000398527 SAMD9LQ8IVG5 1584 aa14.57□□□□□ -0.08
MSL3-207ENST00000398527 TMED8Q6PL24 325 aaPredicted RBP14.57□□□□□ -0.08
MSL3-207ENST00000398527 SIN3AQ96ST3 1273 aa14.57□□□□□ -0.08
MSL3-207ENST00000398527 SENP3Q9H4L4 574 aaPredicted RBP14.57□□□□□ -0.08
MSL3-207ENST00000398527 ROCK1Q13464 1354 aa14.56□□□□□ -0.08
MSL3-207ENST00000398527 RNF17Q9BXT8 1623 aaKnown RBP14.56□□□□□ -0.08
MSL3-207ENST00000398527 PLXNC1O60486 1568 aa14.56□□□□□ -0.08
MSL3-207ENST00000398527 POTEAQ6S8J7 498 aa14.55□□□□□ -0.08
MSL3-207ENST00000398527 TONSLQ96HA7 1378 aa14.55□□□□□ -0.08
MSL3-207ENST00000398527 IL27Q8NEV9 243 aa14.54□□□□□ -0.08
MSL3-207ENST00000398527 BBXQ8WY36 941 aaPredicted RBP14.54□□□□□ -0.08
MSL3-207ENST00000398527 CCER2I3L3R5 266 aa14.53□□□□□ -0.08
MSL3-207ENST00000398527 CLSTN1O94985 981 aa14.52□□□□□ -0.08
MSL3-207ENST00000398527 SYNMO15061 1565 aa14.52□□□□□ -0.08
MSL3-207ENST00000398527 LRRC7Q96NW7 1537 aa14.52□□□□□ -0.08
MSL3-207ENST00000398527 SETD1AO15047 1707 aaKnown RBP14.51□□□□□ -0.09
MSL3-207ENST00000398527 RNF216Q9NWF9 866 aaPredicted RBP14.51□□□□□ -0.09
MSL3-207ENST00000398527 MED14O60244 1454 aa14.51□□□□□ -0.09
MSL3-207ENST00000398527 DEPDC5O75140 1603 aa14.5□□□□□ -0.09
MSL3-207ENST00000398527 A2MP01023 1474 aa14.5□□□□□ -0.09
MSL3-207ENST00000398527 ANKLE2Q86XL3 938 aa14.5□□□□□ -0.09
MSL3-207ENST00000398527 NPHP4O75161 1426 aaPredicted RBP14.5□□□□□ -0.09
MSL3-207ENST00000398527 STRCP1A6NGW2 1772 aa14.5□□□□□ -0.09
MSL3-207ENST00000398527 SPAG9O60271 1321 aaKnown RBP14.5□□□□□ -0.09
MSL3-207ENST00000398527 FTSJ3Q8IY81 847 aaKnown RBP14.49□□□□□ -0.09
MSL3-207ENST00000398527 ATP7AQ04656 1500 aa14.49□□□□□ -0.09
MSL3-207ENST00000398527 TNRQ92752 1358 aa14.48□□□□□ -0.09
MSL3-207ENST00000398527 INO80Q9ULG1 1556 aaPredicted RBP14.48□□□□□ -0.09
MSL3-207ENST00000398527 CDC42BPAQ5VT25 1732 aa14.48□□□□□ -0.09
MSL3-207ENST00000398527 GTF2E1P29083 439 aaPredicted RBP14.48□□□□□ -0.09
MSL3-207ENST00000398527 GGT6Q6P531 493 aa14.48□□□□□ -0.09
MSL3-207ENST00000398527 DAPK1P53355 1430 aa14.47□□□□□ -0.09
MSL3-207ENST00000398527 IQGAP1P46940 1657 aa14.47□□□□□ -0.09
MSL3-207ENST00000398527 SYCP2Q9BX26 1530 aa14.47□□□□□ -0.09
MSL3-207ENST00000398527 WWC1Q8IX03 1113 aa14.46□□□□□ -0.1
MSL3-207ENST00000398527 ABCC5O15440 1437 aa14.45□□□□□ -0.1
MSL3-207ENST00000398527 THEMISQ8N1K5 641 aaPredicted RBP14.44□□□□□ -0.1
MSL3-207ENST00000398527 GPATCH8Q9UKJ3 1502 aaKnown RBP14.44□□□□□ -0.1
MSL3-207ENST00000398527 KCNG1Q9UIX4 513 aa14.43□□□□□ -0.1
MSL3-207ENST00000398527 ADGBQ8N7X0 1667 aa14.43□□□□□ -0.1
MSL3-207ENST00000398527 RRP7BPQ9NSQ0 103 aa14.43□□□□□ -0.1
MSL3-207ENST00000398527 CAMSAP2Q08AD1 1489 aa14.42□□□□□ -0.1
MSL3-207ENST00000398527 PZPP20742 1482 aa14.42□□□□□ -0.1
MSL3-207ENST00000398527 CHIC2Q9UKJ5 165 aa14.42□□□□□ -0.1
MSL3-207ENST00000398527 ADGRL2O95490 1459 aa14.42□□□□□ -0.1
MSL3-207ENST00000398527 NLRP1Q9C000 1473 aa14.42□□□□□ -0.1
MSL3-207ENST00000398527 FAM135AQ9P2D6 1515 aa14.41□□□□□ -0.1
MSL3-207ENST00000398527 DDX10Q13206 875 aaKnown RBP14.41□□□□□ -0.1
MSL3-207ENST00000398527 FBXO31Q5XUX0 539 aaPredicted RBP14.41□□□□□ -0.1
MSL3-207ENST00000398527 UGGT1Q9NYU2 1555 aa14.41□□□□□ -0.1
MSL3-207ENST00000398527 CROCC2H7BZ55 1655 aa14.41□□□□□ -0.1
MSL3-207ENST00000398527 UPF1Q92900 1129 aaKnown RBP eCLIP14.41□□□□□ -0.1
MSL3-207ENST00000398527 FAM135BQ49AJ0 1406 aa14.41□□□□□ -0.1
MSL3-207ENST00000398527 HNRNPMP52272 730 aaKnown RBP eCLIP14.4□□□□□ -0.1
MSL3-207ENST00000398527 ANP32CO43423 234 aa14.4□□□□□ -0.11
MSL3-207ENST00000398527 ZNF777Q9ULD5 760 aaPredicted RBP14.4□□□□□ -0.11
MSL3-207ENST00000398527 SUPT16HQ9Y5B9 1047 aaKnown RBP14.4□□□□□ -0.11
MSL3-207ENST00000398527 RPRD2Q5VT52 1461 aaKnown RBP14.39□□□□□ -0.11
MSL3-207ENST00000398527 KIAA1107Q9UPP5 1409 aa14.39□□□□□ -0.11
MSL3-207ENST00000398527 PSMD1Q99460 953 aa14.39□□□□□ -0.11
MSL3-207ENST00000398527 CFDP1Q9UEE9 299 aaPredicted RBP14.38□□□□□ -0.11
MSL3-207ENST00000398527 PLEKHH2Q8IVE3 1493 aa14.38□□□□□ -0.11
MSL3-207ENST00000398527 CANXP27824 592 aaKnown RBP14.38□□□□□ -0.11
MSL3-207ENST00000398527 XIRP1Q702N8 1843 aaKnown RBP14.37□□□□□ -0.11
MSL3-207ENST00000398527 ZNF644Q9H582 1327 aaPredicted RBP14.37□□□□□ -0.11
MSL3-207ENST00000398527 ZC3H13Q5T200 1668 aaKnown RBP14.37□□□□□ -0.11
MSL3-207ENST00000398527 ANKRD30BQ9BXX2 1392 aa14.37□□□□□ -0.11
MSL3-207ENST00000398527 KDM5DQ9BY66 1539 aa14.37□□□□□ -0.11
MSL3-207ENST00000398527 MPHOSPH9Q99550 1183 aa14.37□□□□□ -0.11
MSL3-207ENST00000398527 MSH5O43196 834 aa14.35□□□□□ -0.11
MSL3-207ENST00000398527 CERS3Q8IU89 383 aa14.35□□□□□ -0.11
MSL3-207ENST00000398527 PLCD4Q9BRC7 762 aa14.35□□□□□ -0.11
MSL3-207ENST00000398527 GRIPAP1Q4V328 841 aa14.34□□□□□ -0.11
MSL3-207ENST00000398527 TRIM52Q96A61 297 aa14.34□□□□□ -0.11
MSL3-207ENST00000398527 STAC3Q96MF2 364 aa14.34□□□□□ -0.11
MSL3-207ENST00000398527 SLC4A1APQ9BWU0 796 aaKnown RBP14.32□□□□□ -0.12
MSL3-207ENST00000398527 ROBO1Q9Y6N7 1651 aa14.32□□□□□ -0.12
MSL3-207ENST00000398527 DHX29Q7Z478 1369 aaKnown RBP14.31□□□□□ -0.12
MSL3-207ENST00000398527 ARHGEF5Q12774 1597 aa14.31□□□□□ -0.12
MSL3-207ENST00000398527 CNGB1Q14028 1251 aaPredicted RBP14.31□□□□□ -0.12
MSL3-207ENST00000398527 ARID3AQ99856 593 aa14.3□□□□□ -0.12
MSL3-207ENST00000398527 PRDM16Q9HAZ2 1276 aa14.3□□□□□ -0.12
MSL3-207ENST00000398527 ANKRD30AQ9BXX3 1397 aa14.3□□□□□ -0.12
MSL3-207ENST00000398527 EIF4G2P78344 907 aaKnown RBP eCLIP14.3□□□□□ -0.12
MSL3-207ENST00000398527 FAM43BQ6ZT52 329 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms