RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 DMRT2Q9Y5R5 561 aa23.28■■□□□ 1.32
MBD1-207ENST00000398488 CCDC144AA2RUR9 1427 aa23.25■■□□□ 1.31
MBD1-207ENST00000398488 EID1Q9Y6B2 187 aa23.24■■□□□ 1.31
MBD1-207ENST00000398488 KIF1BO60333 1816 aa23.24■■□□□ 1.31
MBD1-207ENST00000398488 ZNF326Q5BKZ1 582 aaKnown RBP23.23■■□□□ 1.31
MBD1-207ENST00000398488 IQGAP1P46940 1657 aa23.22■■□□□ 1.31
MBD1-207ENST00000398488 SPATA31E1Q6ZUB1 1445 aa23.21■■□□□ 1.31
MBD1-207ENST00000398488 NEXMIFQ5QGS0 1516 aa23.2■■□□□ 1.3
MBD1-207ENST00000398488 DHX57Q6P158 1386 aaKnown RBP23.2■■□□□ 1.3
MBD1-207ENST00000398488 ZNF335Q9H4Z2 1342 aaPredicted RBP23.19■■□□□ 1.3
MBD1-207ENST00000398488 RGL3Q3MIN7 710 aa23.18■■□□□ 1.3
MBD1-207ENST00000398488 SLC26A8Q96RN1 970 aa23.17■■□□□ 1.3
MBD1-207ENST00000398488 PPP1R15AO75807 674 aaPredicted RBP23.16■■□□□ 1.3
MBD1-207ENST00000398488 PLEKHG1Q9ULL1 1385 aa23.16■■□□□ 1.3
MBD1-207ENST00000398488 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.15■■□□□ 1.3
MBD1-207ENST00000398488 LTBP4Q8N2S1 1624 aa23.14■■□□□ 1.3
MBD1-207ENST00000398488 HDGFP51858 240 aaKnown RBP23.13■■□□□ 1.29
MBD1-207ENST00000398488 ADAMTS13Q76LX8 1427 aa23.12■■□□□ 1.29
MBD1-207ENST00000398488 PPLO60437 1756 aa23.11■■□□□ 1.29
MBD1-207ENST00000398488 BCANQ96GW7 911 aa23.11■■□□□ 1.29
MBD1-207ENST00000398488 NRXN3Q9Y4C0 1643 aa23.1■■□□□ 1.29
MBD1-207ENST00000398488 STRCP1A6NGW2 1772 aa23.1■■□□□ 1.29
MBD1-207ENST00000398488 RPGRIP1LQ68CZ1 1315 aa23.1■■□□□ 1.29
MBD1-207ENST00000398488 SIN3AQ96ST3 1273 aa23.09■■□□□ 1.29
MBD1-207ENST00000398488 ADGRF5Q8IZF2 1346 aa23.08■■□□□ 1.29
MBD1-207ENST00000398488 IFT172Q9UG01 1749 aa23.08■■□□□ 1.29
MBD1-207ENST00000398488 SETBP1Q9Y6X0 1596 aa23.05■■□□□ 1.28
MBD1-207ENST00000398488 TBX22Q9Y458 520 aa23.05■■□□□ 1.28
MBD1-207ENST00000398488 VGFO15240 615 aaPredicted RBP23.04■■□□□ 1.28
MBD1-207ENST00000398488 CERKQ8TCT0 537 aa23.03■■□□□ 1.28
MBD1-207ENST00000398488 PTPRUQ92729 1446 aa23■■□□□ 1.27
MBD1-207ENST00000398488 METP08581 1390 aa23■■□□□ 1.27
MBD1-207ENST00000398488 KCNA6P17658 529 aa22.99■■□□□ 1.27
MBD1-207ENST00000398488 NEUROD1Q13562 356 aa22.98■■□□□ 1.27
MBD1-207ENST00000398488 KDM2AQ9Y2K7 1162 aa22.98■■□□□ 1.27
MBD1-207ENST00000398488 DIP2AQ14689 1571 aa22.98■■□□□ 1.27
MBD1-207ENST00000398488 SETD1AO15047 1707 aaKnown RBP22.98■■□□□ 1.27
MBD1-207ENST00000398488 DCAF11Q8TEB1 546 aa22.98■■□□□ 1.27
MBD1-207ENST00000398488 ALKQ9UM73 1620 aa22.97■■□□□ 1.27
MBD1-207ENST00000398488 CHD2O14647 1828 aaKnown RBP22.97■■□□□ 1.27
MBD1-207ENST00000398488 NRXN1Q9ULB1 1477 aa22.96■■□□□ 1.27
MBD1-207ENST00000398488 RBM33Q96EV2 1170 aaKnown RBP22.96■■□□□ 1.27
MBD1-207ENST00000398488 NWD1Q149M9 1564 aa22.96■■□□□ 1.27
MBD1-207ENST00000398488 CPS1P31327 1500 aa22.96■■□□□ 1.27
MBD1-207ENST00000398488 LRRC7Q96NW7 1537 aa22.96■■□□□ 1.27
MBD1-207ENST00000398488 MYOM2P54296 1465 aa22.95■■□□□ 1.26
MBD1-207ENST00000398488 PIK3C2GO75747 1445 aa22.95■■□□□ 1.26
MBD1-207ENST00000398488 PIK3R4Q99570 1358 aa22.92■■□□□ 1.26
MBD1-207ENST00000398488 L3MBTL2Q969R5 705 aa22.92■■□□□ 1.26
MBD1-207ENST00000398488 AMOTL2Q9Y2J4 779 aa22.92■■□□□ 1.26
MBD1-207ENST00000398488 CFAP70Q5T0N1 1121 aa22.91■■□□□ 1.26
MBD1-207ENST00000398488 ASXL1Q8IXJ9 1541 aa22.91■■□□□ 1.26
MBD1-207ENST00000398488 XIRP1Q702N8 1843 aaKnown RBP22.9■■□□□ 1.26
MBD1-207ENST00000398488 TMEM132EQ6IEE7 984 aa22.89■■□□□ 1.26
MBD1-207ENST00000398488 C14orf93Q9H972 538 aaKnown RBP22.89■■□□□ 1.26
MBD1-207ENST00000398488 PROSER2Q86WR7 435 aaPredicted RBP22.88■■□□□ 1.25
MBD1-207ENST00000398488 XRN1Q8IZH2 1706 aaKnown RBP22.88■■□□□ 1.25
MBD1-207ENST00000398488 TMEM94Q12767 1356 aa22.87■■□□□ 1.25
MBD1-207ENST00000398488 NKTRP30414 1462 aaKnown RBP22.87■■□□□ 1.25
MBD1-207ENST00000398488 IQSEC2Q5JU85 1478 aa22.84■■□□□ 1.25
MBD1-207ENST00000398488 STK26Q9P289 416 aa22.82■■□□□ 1.24
MBD1-207ENST00000398488 ROBO2Q9HCK4 1378 aa22.82■■□□□ 1.24
MBD1-207ENST00000398488 PRAG1Q86YV5 1406 aa22.81■■□□□ 1.24
MBD1-207ENST00000398488 STAC3Q96MF2 364 aa22.81■■□□□ 1.24
MBD1-207ENST00000398488 ADGRB1O14514 1584 aa22.8■■□□□ 1.24
MBD1-207ENST00000398488 LRPPRCP42704 1394 aaKnown RBP22.78■■□□□ 1.24
MBD1-207ENST00000398488 YTHDC2Q9H6S0 1430 aaKnown RBP22.78■■□□□ 1.24
MBD1-207ENST00000398488 LAMC1P11047 1609 aa22.78■■□□□ 1.24
MBD1-207ENST00000398488 FBXO41Q8TF61 875 aa22.77■■□□□ 1.24
MBD1-207ENST00000398488 UBAP1LF5GYI3 381 aa22.77■■□□□ 1.24
MBD1-207ENST00000398488 NBPF1Q3BBV0 1214 aa22.77■■□□□ 1.24
MBD1-207ENST00000398488 NBPF8Q3BBV2 869 aa22.77■■□□□ 1.24
MBD1-207ENST00000398488 CCER1Q8TC90 406 aaPredicted RBP22.77■■□□□ 1.24
MBD1-207ENST00000398488 ILDR1Q86SU0 546 aaPredicted RBP22.76■■□□□ 1.23
MBD1-207ENST00000398488 WAPLQ7Z5K2 1190 aa22.75■■□□□ 1.23
MBD1-207ENST00000398488 PTCH1Q13635 1447 aa22.75■■□□□ 1.23
MBD1-207ENST00000398488 ABCC11Q96J66 1382 aa22.75■■□□□ 1.23
MBD1-207ENST00000398488 PLEKHH1Q9ULM0 1364 aa22.75■■□□□ 1.23
MBD1-207ENST00000398488 TONSLQ96HA7 1378 aa22.74■■□□□ 1.23
MBD1-207ENST00000398488 TECPR2O15040 1411 aa22.73■■□□□ 1.23
MBD1-207ENST00000398488 CLSPNQ9HAW4 1339 aa22.71■■□□□ 1.23
MBD1-207ENST00000398488 NCOA3Q9Y6Q9 1424 aa22.71■■□□□ 1.23
MBD1-207ENST00000398488 KNDC1Q76NI1 1749 aa22.71■■□□□ 1.23
MBD1-207ENST00000398488 C14orf37Q86TY3 774 aa22.7■■□□□ 1.22
MBD1-207ENST00000398488 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.69■■□□□ 1.22
MBD1-207ENST00000398488 KIAA1210Q9ULL0 1709 aa22.69■■□□□ 1.22
MBD1-207ENST00000398488 TRAK1Q9UPV9 953 aa22.69■■□□□ 1.22
MBD1-207ENST00000398488 NALCNQ8IZF0 1738 aa22.69■■□□□ 1.22
MBD1-207ENST00000398488 MSH6P52701 1360 aa22.68■■□□□ 1.22
MBD1-207ENST00000398488 TOM1O60784 492 aa22.67■■□□□ 1.22
MBD1-207ENST00000398488 PIP4K2BP78356 416 aa22.67■■□□□ 1.22
MBD1-207ENST00000398488 C19orf44Q9H6X5 657 aa22.67■■□□□ 1.22
MBD1-207ENST00000398488 TRPM1Q7Z4N2 1603 aa22.67■■□□□ 1.22
MBD1-207ENST00000398488 ADGRL3Q9HAR2 1447 aa22.66■■□□□ 1.22
MBD1-207ENST00000398488 SIRT1Q96EB6 747 aa22.65■■□□□ 1.22
MBD1-207ENST00000398488 PRAM1Q96QH2 718 aa22.65■■□□□ 1.22
MBD1-207ENST00000398488 SAFB2Q14151 953 aaKnown RBP eCLIP22.64■■□□□ 1.21
MBD1-207ENST00000398488 FAM135BQ49AJ0 1406 aa22.64■■□□□ 1.21
MBD1-207ENST00000398488 DLC1Q96QB1 1528 aa22.63■■□□□ 1.21
MBD1-207ENST00000398488 SCAF1Q9H7N4 1312 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms