RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 CCDC141Q6ZP82 1450 aa14.98□□□□□ -0.01
PUM3-202ENST00000397885 PLXNC1O60486 1568 aa14.98□□□□□ -0.01
PUM3-202ENST00000397885 ROCK1Q13464 1354 aa14.98□□□□□ -0.01
PUM3-202ENST00000397885 PREX1Q8TCU6 1659 aa14.97□□□□□ -0.01
PUM3-202ENST00000397885 SPATA31E1Q6ZUB1 1445 aa14.97□□□□□ -0.01
PUM3-202ENST00000397885 ARHGEF5Q12774 1597 aa14.97□□□□□ -0.01
PUM3-202ENST00000397885 CEBPAP49715 358 aaPredicted RBP14.97□□□□□ -0.01
PUM3-202ENST00000397885 PDE3BQ13370 1112 aa14.97□□□□□ -0.01
PUM3-202ENST00000397885 PNISRQ8TF01 805 aaKnown RBP14.97□□□□□ -0.01
PUM3-202ENST00000397885 RCAN3Q9UKA8 241 aa14.97□□□□□ -0.01
PUM3-202ENST00000397885 KIF7Q2M1P5 1343 aa14.97□□□□□ -0.01
PUM3-202ENST00000397885 C3P01024 1663 aa14.96□□□□□ -0.01
PUM3-202ENST00000397885 DHX29Q7Z478 1369 aaKnown RBP14.96□□□□□ -0.01
PUM3-202ENST00000397885 SETD1BQ9UPS6 1966 aaKnown RBP14.95□□□□□ -0.02
PUM3-202ENST00000397885 MROH2AA6NES4 1674 aa14.95□□□□□ -0.02
PUM3-202ENST00000397885 RPRD2Q5VT52 1461 aaKnown RBP14.95□□□□□ -0.02
PUM3-202ENST00000397885 LRPPRCP42704 1394 aaKnown RBP14.95□□□□□ -0.02
PUM3-202ENST00000397885 PPP6R1Q9UPN7 881 aa14.94□□□□□ -0.02
PUM3-202ENST00000397885 DNMT1P26358 1616 aaKnown RBP14.93□□□□□ -0.02
PUM3-202ENST00000397885 TSPY4P0CV99 314 aa14.93□□□□□ -0.02
PUM3-202ENST00000397885 TSPY10P0CW01 314 aa14.93□□□□□ -0.02
PUM3-202ENST00000397885 CALD1Q05682 793 aaKnown RBP14.93□□□□□ -0.02
PUM3-202ENST00000397885 FAM161AQ3B820 660 aa14.93□□□□□ -0.02
PUM3-202ENST00000397885 L3MBTL2Q969R5 705 aa14.93□□□□□ -0.02
PUM3-202ENST00000397885 PDCL3Q9H2J4 239 aa14.93□□□□□ -0.02
PUM3-202ENST00000397885 DAPK1P53355 1430 aa14.93□□□□□ -0.02
PUM3-202ENST00000397885 SLC4A3P48751 1232 aa14.93□□□□□ -0.02
PUM3-202ENST00000397885 UHRF1BP1Q6BDS2 1440 aa14.91□□□□□ -0.02
PUM3-202ENST00000397885 HSPA2P54652 639 aa14.91□□□□□ -0.02
PUM3-202ENST00000397885 ANKRD30BQ9BXX2 1392 aa14.91□□□□□ -0.02
PUM3-202ENST00000397885 TPM2P07951 284 aa14.91□□□□□ -0.02
PUM3-202ENST00000397885 KTN1Q86UP2 1357 aaKnown RBP14.9□□□□□ -0.02
PUM3-202ENST00000397885 CLTCQ00610 1675 aaKnown RBP14.9□□□□□ -0.02
PUM3-202ENST00000397885 GGT6Q6P531 493 aa14.9□□□□□ -0.02
PUM3-202ENST00000397885 MAST1Q9Y2H9 1570 aa14.9□□□□□ -0.02
PUM3-202ENST00000397885 ZMYM3Q14202 1370 aa14.89□□□□□ -0.03
PUM3-202ENST00000397885 NPATQ14207 1427 aa14.89□□□□□ -0.03
PUM3-202ENST00000397885 POGKQ9P215 609 aa14.88□□□□□ -0.03
PUM3-202ENST00000397885 FSD2A1L4K1 749 aa14.87□□□□□ -0.03
PUM3-202ENST00000397885 KDM2BQ8NHM5 1336 aa14.87□□□□□ -0.03
PUM3-202ENST00000397885 BRD4O60885 1362 aaPredicted RBP14.87□□□□□ -0.03
PUM3-202ENST00000397885 ABCC5O15440 1437 aa14.87□□□□□ -0.03
PUM3-202ENST00000397885 C8orf34Q49A92 452 aa14.87□□□□□ -0.03
PUM3-202ENST00000397885 TMC1Q8TDI8 760 aa14.87□□□□□ -0.03
PUM3-202ENST00000397885 CENPQQ7L2Z9 268 aaPredicted RBP14.86□□□□□ -0.03
PUM3-202ENST00000397885 FAM135AQ9P2D6 1515 aa14.86□□□□□ -0.03
PUM3-202ENST00000397885 KIF3BO15066 747 aa14.86□□□□□ -0.03
PUM3-202ENST00000397885 ROCK2O75116 1388 aaKnown RBP14.85□□□□□ -0.03
PUM3-202ENST00000397885 GOLGA6L3A6NEY3 463 aa14.85□□□□□ -0.03
PUM3-202ENST00000397885 RBM10P98175 930 aaKnown RBP14.84□□□□□ -0.03
PUM3-202ENST00000397885 FOXD1Q16676 465 aa14.84□□□□□ -0.03
PUM3-202ENST00000397885 SLC4A1APQ9BWU0 796 aaKnown RBP14.84□□□□□ -0.03
PUM3-202ENST00000397885 XRCC6P12956 609 aaKnown RBP eCLIP14.84□□□□□ -0.03
PUM3-202ENST00000397885 AAMPQ13685 434 aa14.84□□□□□ -0.03
PUM3-202ENST00000397885 PRDM4Q9UKN5 801 aa14.83□□□□□ -0.03
PUM3-202ENST00000397885 DMRT2Q9Y5R5 561 aa14.83□□□□□ -0.03
PUM3-202ENST00000397885 INSRP06213 1382 aa14.83□□□□□ -0.04
PUM3-202ENST00000397885 NBPF8Q3BBV2 869 aa14.82□□□□□ -0.04
PUM3-202ENST00000397885 ISY1Q9ULR0 285 aaKnown RBP14.82□□□□□ -0.04
PUM3-202ENST00000397885 ILDR1Q86SU0 546 aaPredicted RBP14.82□□□□□ -0.04
PUM3-202ENST00000397885 EIF2AK4Q9P2K8 1649 aaKnown RBP14.81□□□□□ -0.04
PUM3-202ENST00000397885 BECN1Q14457 450 aa14.81□□□□□ -0.04
PUM3-202ENST00000397885 CROCC2H7BZ55 1655 aa14.81□□□□□ -0.04
PUM3-202ENST00000397885 KDM5DQ9BY66 1539 aa14.81□□□□□ -0.04
PUM3-202ENST00000397885 SHANK2Q9UPX8 1470 aa14.81□□□□□ -0.04
PUM3-202ENST00000397885 STRCQ7RTU9 1775 aa14.81□□□□□ -0.04
PUM3-202ENST00000397885 FGD1P98174 961 aa14.81□□□□□ -0.04
PUM3-202ENST00000397885 RNF17Q9BXT8 1623 aaKnown RBP14.79□□□□□ -0.04
PUM3-202ENST00000397885 DUOX2Q9NRD8 1548 aa14.79□□□□□ -0.04
PUM3-202ENST00000397885 MRE11P49959 708 aa14.79□□□□□ -0.04
PUM3-202ENST00000397885 KIF15Q9NS87 1388 aa14.79□□□□□ -0.04
PUM3-202ENST00000397885 PZPP20742 1482 aa14.79□□□□□ -0.04
PUM3-202ENST00000397885 RALBP1Q15311 655 aa14.78□□□□□ -0.04
PUM3-202ENST00000397885 CRBNQ96SW2 442 aa14.78□□□□□ -0.04
PUM3-202ENST00000397885 MAP7D2Q96T17 732 aa14.78□□□□□ -0.04
PUM3-202ENST00000397885 MYO3AQ8NEV4 1616 aa14.78□□□□□ -0.04
PUM3-202ENST00000397885 ZNF142P52746 1687 aaPredicted RBP14.78□□□□□ -0.04
PUM3-202ENST00000397885 MYBBP1AQ9BQG0 1328 aaKnown RBP14.78□□□□□ -0.04
PUM3-202ENST00000397885 ESPNB1AK53 854 aa14.78□□□□□ -0.04
PUM3-202ENST00000397885 TERF1P54274 439 aa14.77□□□□□ -0.05
PUM3-202ENST00000397885 ADGRL2O95490 1459 aa14.77□□□□□ -0.05
PUM3-202ENST00000397885 ZC3H13Q5T200 1668 aaKnown RBP14.76□□□□□ -0.05
PUM3-202ENST00000397885 PTPRTO14522 1441 aa14.76□□□□□ -0.05
PUM3-202ENST00000397885 VIRMAQ69YN4 1812 aaKnown RBP14.76□□□□□ -0.05
PUM3-202ENST00000397885 FBXO41Q8TF61 875 aa14.75□□□□□ -0.05
PUM3-202ENST00000397885 CAMSAP1Q5T5Y3 1602 aa14.75□□□□□ -0.05
PUM3-202ENST00000397885 CEP170BQ9Y4F5 1589 aaPredicted RBP14.75□□□□□ -0.05
PUM3-202ENST00000397885 USP47Q96K76 1375 aa14.75□□□□□ -0.05
PUM3-202ENST00000397885 ANTXR1Q9H6X2 564 aa14.75□□□□□ -0.05
PUM3-202ENST00000397885 ERBINQ96RT1 1412 aa14.74□□□□□ -0.05
PUM3-202ENST00000397885 MYH16Q9H6N6 1097 aa14.73□□□□□ -0.05
PUM3-202ENST00000397885 A2ML1A8K2U0 1454 aa14.73□□□□□ -0.05
PUM3-202ENST00000397885 TNRQ92752 1358 aa14.73□□□□□ -0.05
PUM3-202ENST00000397885 ANKRD30AQ9BXX3 1397 aa14.73□□□□□ -0.05
PUM3-202ENST00000397885 ABCC3O15438 1527 aa14.72□□□□□ -0.05
PUM3-202ENST00000397885 PLA2R1Q13018 1463 aa14.72□□□□□ -0.05
PUM3-202ENST00000397885 MROH1Q8NDA8 1641 aa14.72□□□□□ -0.05
PUM3-202ENST00000397885 FBXO31Q5XUX0 539 aaPredicted RBP14.71□□□□□ -0.05
PUM3-202ENST00000397885 SKAP1Q86WV1 359 aa14.71□□□□□ -0.05
PUM3-202ENST00000397885 PKD2Q13563 968 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms