RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 ZFYVE9O95405 1425 aa21.87■■□□□ 1.09
SNRNP25-203ENST00000397876 TMEM131LA2VDJ0 1609 aa21.87■■□□□ 1.09
SNRNP25-203ENST00000397876 MYO5BQ9ULV0 1848 aa21.87■■□□□ 1.09
SNRNP25-203ENST00000397876 NKTRP30414 1462 aaKnown RBP21.86■■□□□ 1.09
SNRNP25-203ENST00000397876 NWD1Q149M9 1564 aa21.86■■□□□ 1.09
SNRNP25-203ENST00000397876 TMEM94Q12767 1356 aa21.86■■□□□ 1.09
SNRNP25-203ENST00000397876 PPP1R15AO75807 674 aaPredicted RBP21.85■■□□□ 1.09
SNRNP25-203ENST00000397876 SENP3Q9H4L4 574 aaPredicted RBP21.85■■□□□ 1.09
SNRNP25-203ENST00000397876 RIMS2Q9UQ26 1411 aa21.85■■□□□ 1.09
SNRNP25-203ENST00000397876 HDGFP51858 240 aaKnown RBP21.84■■□□□ 1.09
SNRNP25-203ENST00000397876 PPARGC1BQ86YN6 1023 aaKnown RBP21.84■■□□□ 1.09
SNRNP25-203ENST00000397876 PLEKHG1Q9ULL1 1385 aa21.84■■□□□ 1.09
SNRNP25-203ENST00000397876 NUP155O75694 1391 aa21.83■■□□□ 1.08
SNRNP25-203ENST00000397876 CHGAP10645 457 aaKnown RBP21.81■■□□□ 1.08
SNRNP25-203ENST00000397876 PROSER2Q86WR7 435 aaPredicted RBP21.81■■□□□ 1.08
SNRNP25-203ENST00000397876 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.79■■□□□ 1.08
SNRNP25-203ENST00000397876 PHF23Q9BUL5 403 aaPredicted RBP21.78■■□□□ 1.08
SNRNP25-203ENST00000397876 FAM135BQ49AJ0 1406 aa21.78■■□□□ 1.08
SNRNP25-203ENST00000397876 CHD2O14647 1828 aaKnown RBP21.76■■□□□ 1.07
SNRNP25-203ENST00000397876 MSH6P52701 1360 aa21.75■■□□□ 1.07
SNRNP25-203ENST00000397876 DIP2AQ14689 1571 aa21.75■■□□□ 1.07
SNRNP25-203ENST00000397876 RBM33Q96EV2 1170 aaKnown RBP21.75■■□□□ 1.07
SNRNP25-203ENST00000397876 RRBP1Q9P2E9 1410 aaKnown RBP21.73■■□□□ 1.07
SNRNP25-203ENST00000397876 ROBO1Q9Y6N7 1651 aa21.73■■□□□ 1.07
SNRNP25-203ENST00000397876 TBX22Q9Y458 520 aa21.73■■□□□ 1.07
SNRNP25-203ENST00000397876 SPHKAPQ2M3C7 1700 aa21.72■■□□□ 1.07
SNRNP25-203ENST00000397876 ADAMTS13Q76LX8 1427 aa21.71■■□□□ 1.07
SNRNP25-203ENST00000397876 NUTM2DQ5VT03 806 aaPredicted RBP21.7■■□□□ 1.06
SNRNP25-203ENST00000397876 PIK3R4Q99570 1358 aa21.69■■□□□ 1.06
SNRNP25-203ENST00000397876 TRPM2O94759 1503 aa21.68■■□□□ 1.06
SNRNP25-203ENST00000397876 NCOA3Q9Y6Q9 1424 aa21.67■■□□□ 1.06
SNRNP25-203ENST00000397876 NAIPQ13075 1403 aa21.65■■□□□ 1.06
SNRNP25-203ENST00000397876 C14orf37Q86TY3 774 aa21.64■■□□□ 1.05
SNRNP25-203ENST00000397876 SLAIN2Q9P270 581 aa21.64■■□□□ 1.05
SNRNP25-203ENST00000397876 ZNF326Q5BKZ1 582 aaKnown RBP21.62■■□□□ 1.05
SNRNP25-203ENST00000397876 SETBP1Q9Y6X0 1596 aa21.61■■□□□ 1.05
SNRNP25-203ENST00000397876 CLTCL1P53675 1640 aa21.61■■□□□ 1.05
SNRNP25-203ENST00000397876 PHLPP1O60346 1717 aa21.6■■□□□ 1.05
SNRNP25-203ENST00000397876 NRXN3Q9Y4C0 1643 aa21.6■■□□□ 1.05
SNRNP25-203ENST00000397876 HFM1A2PYH4 1435 aa21.59■■□□□ 1.05
SNRNP25-203ENST00000397876 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.58■■□□□ 1.05
SNRNP25-203ENST00000397876 AMOTL2Q9Y2J4 779 aa21.58■■□□□ 1.05
SNRNP25-203ENST00000397876 PTPRUQ92729 1446 aa21.57■■□□□ 1.04
SNRNP25-203ENST00000397876 CADPS2Q86UW7 1296 aa21.57■■□□□ 1.04
SNRNP25-203ENST00000397876 XRN1Q8IZH2 1706 aaKnown RBP21.57■■□□□ 1.04
SNRNP25-203ENST00000397876 NEXMIFQ5QGS0 1516 aa21.56■■□□□ 1.04
SNRNP25-203ENST00000397876 ATF3P18847 181 aa21.56■■□□□ 1.04
SNRNP25-203ENST00000397876 C19orf44Q9H6X5 657 aa21.56■■□□□ 1.04
SNRNP25-203ENST00000397876 KIF1BO60333 1816 aa21.56■■□□□ 1.04
SNRNP25-203ENST00000397876 JCADQ9P266 1359 aa21.54■■□□□ 1.04
SNRNP25-203ENST00000397876 TRIM52Q96A61 297 aa21.54■■□□□ 1.04
SNRNP25-203ENST00000397876 RGS17Q9UGC6 210 aaPredicted RBP21.53■■□□□ 1.04
SNRNP25-203ENST00000397876 COL16A1Q07092 1604 aaPredicted RBP21.53■■□□□ 1.04
SNRNP25-203ENST00000397876 DCCP43146 1447 aa21.52■■□□□ 1.04
SNRNP25-203ENST00000397876 AHDC1Q5TGY3 1603 aaPredicted RBP21.51■■□□□ 1.03
SNRNP25-203ENST00000397876 METP08581 1390 aa21.5■■□□□ 1.03
SNRNP25-203ENST00000397876 SLC4A1APQ9BWU0 796 aaKnown RBP21.48■■□□□ 1.03
SNRNP25-203ENST00000397876 ADGRL3Q9HAR2 1447 aa21.44■■□□□ 1.02
SNRNP25-203ENST00000397876 VGFO15240 615 aaPredicted RBP21.43■■□□□ 1.02
SNRNP25-203ENST00000397876 BRINP3Q76B58 766 aa21.43■■□□□ 1.02
SNRNP25-203ENST00000397876 SPATA31A6Q5VVP1 1343 aa21.43■■□□□ 1.02
SNRNP25-203ENST00000397876 MST1RQ04912 1400 aa21.43■■□□□ 1.02
SNRNP25-203ENST00000397876 ASXL1Q8IXJ9 1541 aa21.43■■□□□ 1.02
SNRNP25-203ENST00000397876 SHPRHQ149N8 1683 aa21.43■■□□□ 1.02
SNRNP25-203ENST00000397876 RPGRIP1LQ68CZ1 1315 aa21.42■■□□□ 1.02
SNRNP25-203ENST00000397876 POTEAQ6S8J7 498 aa21.42■■□□□ 1.02
SNRNP25-203ENST00000397876 NALCNQ8IZF0 1738 aa21.41■■□□□ 1.02
SNRNP25-203ENST00000397876 SETD1AO15047 1707 aaKnown RBP21.41■■□□□ 1.02
SNRNP25-203ENST00000397876 PTCH1Q13635 1447 aa21.4■■□□□ 1.02
SNRNP25-203ENST00000397876 PPLO60437 1756 aa21.4■■□□□ 1.02
SNRNP25-203ENST00000397876 LRP6O75581 1613 aa21.4■■□□□ 1.02
SNRNP25-203ENST00000397876 MEX3CQ5U5Q3 659 aaKnown RBP21.38■■□□□ 1.01
SNRNP25-203ENST00000397876 NHSL1Q5SYE7 1610 aa21.37■■□□□ 1.01
SNRNP25-203ENST00000397876 CCDC144AA2RUR9 1427 aa21.36■■□□□ 1.01
SNRNP25-203ENST00000397876 PRAG1Q86YV5 1406 aa21.36■■□□□ 1.01
SNRNP25-203ENST00000397876 FOXD1Q16676 465 aa21.35■■□□□ 1.01
SNRNP25-203ENST00000397876 SETD5Q9C0A6 1442 aa21.34■■□□□ 1.01
SNRNP25-203ENST00000397876 ROBO2Q9HCK4 1378 aa21.33■■□□□ 1
SNRNP25-203ENST00000397876 C1orf167Q5SNV9 1468 aa21.31■■□□□ 1
SNRNP25-203ENST00000397876 ZNF772Q68DY9 489 aaPredicted RBP21.3■■□□□ 1
SNRNP25-203ENST00000397876 MPHOSPH9Q99550 1183 aa21.3■■□□□ 1
SNRNP25-203ENST00000397876 LRRC59Q96AG4 307 aaKnown RBP21.29■■□□□ 1
SNRNP25-203ENST00000397876 SPATA31E1Q6ZUB1 1445 aa21.29■■□□□ 1
SNRNP25-203ENST00000397876 NUTM2BA6NNL0 878 aaPredicted RBP21.28■■□□□ 1
SNRNP25-203ENST00000397876 NUTM2EB1AL46 878 aaPredicted RBP21.28■■□□□ 1
SNRNP25-203ENST00000397876 NUTM2AQ8IVF1 878 aaPredicted RBP21.28■■□□□ 1
SNRNP25-203ENST00000397876 ACIN1Q9UKV3 1341 aaKnown RBP21.28■■□□□ 1
SNRNP25-203ENST00000397876 IFT172Q9UG01 1749 aa21.27■■□□□ 1
SNRNP25-203ENST00000397876 ANKRD30BQ9BXX2 1392 aa21.27■■□□□ 1
SNRNP25-203ENST00000397876 RGL3Q3MIN7 710 aa21.26■□□□□ 0.99
SNRNP25-203ENST00000397876 DDX17Q92841 729 aaKnown RBP21.26■□□□□ 0.99
SNRNP25-203ENST00000397876 ADGRF5Q8IZF2 1346 aa21.26■□□□□ 0.99
SNRNP25-203ENST00000397876 LAMC1P11047 1609 aa21.26■□□□□ 0.99
SNRNP25-203ENST00000397876 PNPLA6Q8IY17 1366 aa21.24■□□□□ 0.99
SNRNP25-203ENST00000397876 CDC42BPGQ6DT37 1551 aa21.24■□□□□ 0.99
SNRNP25-203ENST00000397876 TECPR2O15040 1411 aa21.21■□□□□ 0.99
SNRNP25-203ENST00000397876 PIK3C2GO75747 1445 aa21.21■□□□□ 0.99
SNRNP25-203ENST00000397876 ORAI2Q96SN7 254 aa21.2■□□□□ 0.98
SNRNP25-203ENST00000397876 AFF2P51816 1311 aa21.2■□□□□ 0.98
SNRNP25-203ENST00000397876 KNDC1Q76NI1 1749 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms