RNA–Protein interactions for RNA: ENST00000397174.6

SCMH1-209, Transcript of Scm polycomb group protein homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCMH1, Length 2,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-209ENST00000397174 SLFN5Q08AF3 891 aa13.21□□□□□ -0.29
SCMH1-209ENST00000397174 ABCC5O15440 1437 aa13.2□□□□□ -0.3
SCMH1-209ENST00000397174 PKD2Q13563 968 aa13.2□□□□□ -0.3
SCMH1-209ENST00000397174 CLUAP1Q96AJ1 413 aa13.2□□□□□ -0.3
SCMH1-209ENST00000397174 NASPP49321 788 aaPredicted RBP13.19□□□□□ -0.3
SCMH1-209ENST00000397174 BBXQ8WY36 941 aaPredicted RBP13.19□□□□□ -0.3
SCMH1-209ENST00000397174 BCL11BQ9C0K0 894 aaPredicted RBP13.19□□□□□ -0.3
SCMH1-209ENST00000397174 SPINK5Q9NQ38 1064 aaPredicted RBP13.19□□□□□ -0.3
SCMH1-209ENST00000397174 COG6Q9Y2V7 657 aa13.19□□□□□ -0.3
SCMH1-209ENST00000397174 RTEL1-TNFRSF6BF6WH68 1400 aa13.18□□□□□ -0.3
SCMH1-209ENST00000397174 CGNL1Q0VF96 1302 aa13.18□□□□□ -0.3
SCMH1-209ENST00000397174 DMTNQ08495 405 aa13.18□□□□□ -0.3
SCMH1-209ENST00000397174 PANK1Q8TE04 598 aa13.18□□□□□ -0.3
SCMH1-209ENST00000397174 TNPO1Q92973 898 aaKnown RBP13.18□□□□□ -0.3
SCMH1-209ENST00000397174 WDR43Q15061 677 aaKnown RBP eCLIP13.17□□□□□ -0.3
SCMH1-209ENST00000397174 C22orf23Q9BZE7 217 aa13.17□□□□□ -0.3
SCMH1-209ENST00000397174 ZNF644Q9H582 1327 aaPredicted RBP13.17□□□□□ -0.3
SCMH1-209ENST00000397174 GTF2E1P29083 439 aaPredicted RBP13.16□□□□□ -0.3
SCMH1-209ENST00000397174 MFAP1P55081 439 aaKnown RBP13.16□□□□□ -0.3
SCMH1-209ENST00000397174 XPCQ01831 940 aaPredicted RBP13.16□□□□□ -0.3
SCMH1-209ENST00000397174 UTP14CQ5TAP6 766 aaKnown RBP13.16□□□□□ -0.3
SCMH1-209ENST00000397174 HSCBQ8IWL3 235 aa13.16□□□□□ -0.3
SCMH1-209ENST00000397174 PANK3Q9H999 370 aa13.16□□□□□ -0.3
SCMH1-209ENST00000397174 NKTRP30414 1462 aaKnown RBP13.16□□□□□ -0.3
SCMH1-209ENST00000397174 DNMT1P26358 1616 aaKnown RBP13.16□□□□□ -0.3
SCMH1-209ENST00000397174 MTERF4Q7Z6M4 381 aaKnown RBP13.16□□□□□ -0.3
SCMH1-209ENST00000397174 TRMT2AQ8IZ69 625 aaKnown RBP13.16□□□□□ -0.3
SCMH1-209ENST00000397174 PDZRN3Q9UPQ7 1066 aa13.16□□□□□ -0.3
SCMH1-209ENST00000397174 CUL7Q14999 1698 aa13.16□□□□□ -0.3
SCMH1-209ENST00000397174 ANP32BQ92688 251 aaKnown RBP13.15□□□□□ -0.3
SCMH1-209ENST00000397174 DDIT3P35638 169 aa13.15□□□□□ -0.3
SCMH1-209ENST00000397174 FBLN2P98095 1184 aa13.14□□□□□ -0.31
SCMH1-209ENST00000397174 KIAA0586Q9BVV6 1533 aa13.14□□□□□ -0.31
SCMH1-209ENST00000397174 DYNC1I1O14576 645 aa13.14□□□□□ -0.31
SCMH1-209ENST00000397174 SKOR2Q2VWA4 1001 aaPredicted RBP13.14□□□□□ -0.31
SCMH1-209ENST00000397174 ZSCAN20P17040 1043 aaPredicted RBP13.14□□□□□ -0.31
SCMH1-209ENST00000397174 CANXP27824 592 aaKnown RBP13.14□□□□□ -0.31
SCMH1-209ENST00000397174 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
SCMH1-209ENST00000397174 GBP4Q96PP9 640 aa13.14□□□□□ -0.31
SCMH1-209ENST00000397174 NCOA3Q9Y6Q9 1424 aa13.13□□□□□ -0.31
SCMH1-209ENST00000397174 CAMSAP2Q08AD1 1489 aa13.13□□□□□ -0.31
SCMH1-209ENST00000397174 ARHGEF12Q9NZN5 1544 aa13.13□□□□□ -0.31
SCMH1-209ENST00000397174 PDE3AQ14432 1141 aa13.13□□□□□ -0.31
SCMH1-209ENST00000397174 CCDC146Q8IYE0 955 aa13.13□□□□□ -0.31
SCMH1-209ENST00000397174 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.13□□□□□ -0.31
SCMH1-209ENST00000397174 CDK13Q14004 1512 aaKnown RBP13.13□□□□□ -0.31
SCMH1-209ENST00000397174 STAC3Q96MF2 364 aa13.12□□□□□ -0.31
SCMH1-209ENST00000397174 PCDHB15Q9Y5E8 787 aa13.12□□□□□ -0.31
SCMH1-209ENST00000397174 ZMYM3Q14202 1370 aa13.12□□□□□ -0.31
SCMH1-209ENST00000397174 ZNF500O60304 480 aaPredicted RBP13.12□□□□□ -0.31
SCMH1-209ENST00000397174 CCDC94Q9BW85 323 aaPredicted RBP13.12□□□□□ -0.31
SCMH1-209ENST00000397174 DISP3Q9P2K9 1392 aa13.12□□□□□ -0.31
SCMH1-209ENST00000397174 EPRSP07814 1512 aaKnown RBP13.12□□□□□ -0.31
SCMH1-209ENST00000397174 PMFBP1Q8TBY8 1022 aa13.11□□□□□ -0.31
SCMH1-209ENST00000397174 NOL7Q9UMY1 257 aaKnown RBP13.11□□□□□ -0.31
SCMH1-209ENST00000397174 CLASP1Q7Z460 1538 aa13.11□□□□□ -0.31
SCMH1-209ENST00000397174 PPP2R1AP30153 589 aa13.1□□□□□ -0.31
SCMH1-209ENST00000397174 RAB3GAP1Q15042 981 aa13.1□□□□□ -0.31
SCMH1-209ENST00000397174 PPP4R3BQ5MIZ7 849 aa13.1□□□□□ -0.31
SCMH1-209ENST00000397174 COL17A1Q9UMD9 1497 aaPredicted RBP13.1□□□□□ -0.31
SCMH1-209ENST00000397174 PDIA4P13667 645 aaKnown RBP13.1□□□□□ -0.31
SCMH1-209ENST00000397174 DMRT2Q9Y5R5 561 aa13.1□□□□□ -0.31
SCMH1-209ENST00000397174 NAP1L2Q9ULW6 460 aaPredicted RBP13.09□□□□□ -0.31
SCMH1-209ENST00000397174 HS1BP3Q53T59 392 aa13.08□□□□□ -0.31
SCMH1-209ENST00000397174 APAF1O14727 1248 aa13.08□□□□□ -0.32
SCMH1-209ENST00000397174 SASS6Q6UVJ0 657 aa13.08□□□□□ -0.32
SCMH1-209ENST00000397174 SMC5Q8IY18 1101 aa13.08□□□□□ -0.32
SCMH1-209ENST00000397174 FOXD4L1Q9NU39 408 aa13.08□□□□□ -0.32
SCMH1-209ENST00000397174 E9PSI1 815 aa13.08□□□□□ -0.32
SCMH1-209ENST00000397174 NINLQ9Y2I6 1382 aa13.07□□□□□ -0.32
SCMH1-209ENST00000397174 MRC2Q9UBG0 1479 aa13.07□□□□□ -0.32
SCMH1-209ENST00000397174 HSP90AB1P08238 724 aaKnown RBP13.07□□□□□ -0.32
SCMH1-209ENST00000397174 PTMSP20962 102 aa13.07□□□□□ -0.32
SCMH1-209ENST00000397174 CHMP4BQ9H444 224 aaKnown RBP13.07□□□□□ -0.32
SCMH1-209ENST00000397174 CIZ1Q9ULV3 898 aaPredicted RBP13.07□□□□□ -0.32
SCMH1-209ENST00000397174 TNNQ9UQP3 1299 aa13.07□□□□□ -0.32
SCMH1-209ENST00000397174 CCDC144AA2RUR9 1427 aa13.07□□□□□ -0.32
SCMH1-209ENST00000397174 NBPF1Q3BBV0 1214 aa13.07□□□□□ -0.32
SCMH1-209ENST00000397174 NCLP19338 710 aaKnown RBP13.06□□□□□ -0.32
SCMH1-209ENST00000397174 TNNT2P45379 298 aaPredicted RBP13.06□□□□□ -0.32
SCMH1-209ENST00000397174 CSPP1Q1MSJ5 1256 aa13.06□□□□□ -0.32
SCMH1-209ENST00000397174 JARID2Q92833 1246 aaPredicted RBP13.05□□□□□ -0.32
SCMH1-209ENST00000397174 ZKSCAN5Q9Y2L8 839 aa13.05□□□□□ -0.32
SCMH1-209ENST00000397174 DDX49Q9Y6V7 483 aaKnown RBP13.05□□□□□ -0.32
SCMH1-209ENST00000397174 TARBP1Q13395 1621 aaKnown RBP13.05□□□□□ -0.32
SCMH1-209ENST00000397174 RLBP1P12271 317 aa13.05□□□□□ -0.32
SCMH1-209ENST00000397174 CBX1P83916 185 aa13.05□□□□□ -0.32
SCMH1-209ENST00000397174 TESK2Q96S53 571 aa13.05□□□□□ -0.32
SCMH1-209ENST00000397174 SCAPERQ9BY12 1400 aa13.05□□□□□ -0.32
SCMH1-209ENST00000397174 ANKRD30AQ9BXX3 1397 aa13.05□□□□□ -0.32
SCMH1-209ENST00000397174 IBTKQ9P2D0 1353 aaPredicted RBP13.05□□□□□ -0.32
SCMH1-209ENST00000397174 SSFA2P28290 1259 aa13.05□□□□□ -0.32
SCMH1-209ENST00000397174 KLHL40Q2TBA0 621 aa13.04□□□□□ -0.32
SCMH1-209ENST00000397174 RWDD1Q9H446 243 aaPredicted RBP13.04□□□□□ -0.32
SCMH1-209ENST00000397174 ZNF777Q9ULD5 760 aaPredicted RBP13.04□□□□□ -0.32
SCMH1-209ENST00000397174 CEP170Q5SW79 1584 aa13.04□□□□□ -0.32
SCMH1-209ENST00000397174 SNX21Q969T3 373 aa13.04□□□□□ -0.32
SCMH1-209ENST00000397174 PDLIM2Q96JY6 352 aa13.04□□□□□ -0.32
SCMH1-209ENST00000397174 RBSNQ9H1K0 784 aa13.04□□□□□ -0.32
SCMH1-209ENST00000397174 GTPBP4Q9BZE4 634 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms