RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 DIAPH3Q9NSV4 1193 aa21.48■■□□□ 1.03
MCF2L-208ENST00000397030 JPH4Q96JJ6 628 aa21.47■■□□□ 1.03
MCF2L-208ENST00000397030 CCAR2Q8N163 923 aaKnown RBP21.47■■□□□ 1.03
MCF2L-208ENST00000397030 RAPGEF4Q8WZA2 1011 aa21.46■■□□□ 1.03
MCF2L-208ENST00000397030 PTMSP20962 102 aa21.46■■□□□ 1.03
MCF2L-208ENST00000397030 IFIT2P09913 472 aaKnown RBP21.45■■□□□ 1.02
MCF2L-208ENST00000397030 ST18O60284 1047 aa21.45■■□□□ 1.02
MCF2L-208ENST00000397030 ANO2Q9NQ90 1003 aa21.45■■□□□ 1.02
MCF2L-208ENST00000397030 EVC2Q86UK5 1308 aa21.45■■□□□ 1.02
MCF2L-208ENST00000397030 ERICH2A1L162 156 aa21.44■■□□□ 1.02
MCF2L-208ENST00000397030 RBM42Q9BTD8 480 aaKnown RBP21.44■■□□□ 1.02
MCF2L-208ENST00000397030 VGFO15240 615 aaPredicted RBP21.44■■□□□ 1.02
MCF2L-208ENST00000397030 LRRFIP1Q32MZ4 808 aaKnown RBP21.43■■□□□ 1.02
MCF2L-208ENST00000397030 R3HCC1Q9Y3T6 440 aaKnown RBP21.42■■□□□ 1.02
MCF2L-208ENST00000397030 DDX58O95786 925 aaKnown RBP21.42■■□□□ 1.02
MCF2L-208ENST00000397030 NEUROD6Q96NK8 337 aa21.41■■□□□ 1.02
MCF2L-208ENST00000397030 BAZ1AQ9NRL2 1556 aaPredicted RBP21.41■■□□□ 1.02
MCF2L-208ENST00000397030 RIC3Q7Z5B4 369 aa21.41■■□□□ 1.02
MCF2L-208ENST00000397030 PANK3Q9H999 370 aa21.41■■□□□ 1.02
MCF2L-208ENST00000397030 CPLX1O14810 134 aa21.4■■□□□ 1.02
MCF2L-208ENST00000397030 PAF1Q8N7H5 531 aa21.4■■□□□ 1.02
MCF2L-208ENST00000397030 CGNL1Q0VF96 1302 aa21.4■■□□□ 1.02
MCF2L-208ENST00000397030 TRDNQ13061 729 aa21.39■■□□□ 1.02
MCF2L-208ENST00000397030 SMARCA2P51531 1590 aa21.39■■□□□ 1.02
MCF2L-208ENST00000397030 FHOD3Q2V2M9 1422 aa21.38■■□□□ 1.01
MCF2L-208ENST00000397030 G3BP1Q13283 466 aaKnown RBP eCLIP21.38■■□□□ 1.01
MCF2L-208ENST00000397030 ZNF428Q96B54 188 aa21.38■■□□□ 1.01
MCF2L-208ENST00000397030 IBSPP21815 317 aaPredicted RBP21.38■■□□□ 1.01
MCF2L-208ENST00000397030 CCDC47Q96A33 483 aaKnown RBP21.38■■□□□ 1.01
MCF2L-208ENST00000397030 FMN1Q68DA7 1419 aa21.37■■□□□ 1.01
MCF2L-208ENST00000397030 ESCO1Q5FWF5 840 aa21.37■■□□□ 1.01
MCF2L-208ENST00000397030 ABCC8Q09428 1581 aa21.37■■□□□ 1.01
MCF2L-208ENST00000397030 FKBP5Q13451 457 aaPredicted RBP21.36■■□□□ 1.01
MCF2L-208ENST00000397030 CPLX2Q6PUV4 134 aaKnown RBP21.36■■□□□ 1.01
MCF2L-208ENST00000397030 TPM1P09493 284 aa21.36■■□□□ 1.01
MCF2L-208ENST00000397030 WASHC4Q2M389 1173 aa21.36■■□□□ 1.01
MCF2L-208ENST00000397030 L3MBTL2Q969R5 705 aa21.35■■□□□ 1.01
MCF2L-208ENST00000397030 HMOX1P09601 288 aa21.35■■□□□ 1.01
MCF2L-208ENST00000397030 CCDC144AA2RUR9 1427 aa21.35■■□□□ 1.01
MCF2L-208ENST00000397030 TSPYL4Q9UJ04 414 aa21.34■■□□□ 1.01
MCF2L-208ENST00000397030 GOLGA6L19H0YKK7 550 aa21.34■■□□□ 1.01
MCF2L-208ENST00000397030 CT47A1Q5JQC4 288 aaPredicted RBP21.34■■□□□ 1.01
MCF2L-208ENST00000397030 CCDC18Q5T9S5 1454 aa21.34■■□□□ 1.01
MCF2L-208ENST00000397030 ZFYVE27Q5T4F4 411 aa21.33■■□□□ 1.01
MCF2L-208ENST00000397030 RAB3GAP2Q9H2M9 1393 aa21.33■■□□□ 1.01
MCF2L-208ENST00000397030 ODF2Q5BJF6 829 aa21.33■■□□□ 1
MCF2L-208ENST00000397030 WWC2Q6AWC2 1192 aa21.33■■□□□ 1
MCF2L-208ENST00000397030 ATP2B2Q01814 1243 aa21.32■■□□□ 1
MCF2L-208ENST00000397030 UACAQ9BZF9 1416 aa21.32■■□□□ 1
MCF2L-208ENST00000397030 BECN2A8MW95 431 aa21.32■■□□□ 1
MCF2L-208ENST00000397030 DIAPH1O60610 1272 aaKnown RBP21.31■■□□□ 1
MCF2L-208ENST00000397030 PHF14O94880 888 aa21.31■■□□□ 1
MCF2L-208ENST00000397030 RBM5P52756 815 aaKnown RBP eCLIP21.31■■□□□ 12e-6■■■■□ 22.7
MCF2L-208ENST00000397030 PROSER2Q86WR7 435 aaPredicted RBP21.31■■□□□ 1
MCF2L-208ENST00000397030 WASHC2AQ641Q2 1341 aa21.3■■□□□ 1
MCF2L-208ENST00000397030 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.3■■□□□ 1
MCF2L-208ENST00000397030 NAP1L1P55209 391 aaKnown RBP21.3■■□□□ 1
MCF2L-208ENST00000397030 KIF6Q6ZMV9 814 aa21.3■■□□□ 1
MCF2L-208ENST00000397030 CCER2I3L3R5 266 aa21.3■■□□□ 1
MCF2L-208ENST00000397030 RSPH4AQ5TD94 716 aa21.3■■□□□ 1
MCF2L-208ENST00000397030 STK11IPQ8N1F8 1099 aa21.3■■□□□ 1
MCF2L-208ENST00000397030 GOLGA6L3A6NEY3 463 aa21.29■■□□□ 1
MCF2L-208ENST00000397030 RIPK4P57078 832 aa21.29■■□□□ 1
MCF2L-208ENST00000397030 PTPRGP23470 1445 aa21.29■■□□□ 1
MCF2L-208ENST00000397030 RUFY2Q8WXA3 655 aa21.29■■□□□ 1
MCF2L-208ENST00000397030 TNNT3P45378 269 aaPredicted RBP21.28■■□□□ 1
MCF2L-208ENST00000397030 ST20-MTHFSA0A0A6YYL1 179 aa21.28■■□□□ 1
MCF2L-208ENST00000397030 PAXIP1Q6ZW49 1069 aaPredicted RBP21.27■■□□□ 1
MCF2L-208ENST00000397030 ZKSCAN1P17029 563 aaPredicted RBP21.26■□□□□ 0.99
MCF2L-208ENST00000397030 DDX54Q8TDD1 881 aaKnown RBP21.26■□□□□ 0.99
MCF2L-208ENST00000397030 DEKP35659 375 aaKnown RBP21.25■□□□□ 0.99
MCF2L-208ENST00000397030 ABTB2Q8N961 1025 aa21.25■□□□□ 0.99
MCF2L-208ENST00000397030 EPS15P42566 896 aa21.25■□□□□ 0.99
MCF2L-208ENST00000397030 NLRP6P59044 892 aa21.25■□□□□ 0.99
MCF2L-208ENST00000397030 ZKSCAN2Q63HK3 967 aa21.25■□□□□ 0.99
MCF2L-208ENST00000397030 ZNF592Q92610 1267 aa21.25■□□□□ 0.99
MCF2L-208ENST00000397030 NLRP13Q86W25 1043 aa21.24■□□□□ 0.99
MCF2L-208ENST00000397030 CHMP4CQ96CF2 233 aa21.24■□□□□ 0.99
MCF2L-208ENST00000397030 ANKRD20A12PQ8NF67 263 aa21.23■□□□□ 0.99
MCF2L-208ENST00000397030 CCDC70Q6NSX1 233 aa21.23■□□□□ 0.99
MCF2L-208ENST00000397030 CABP2Q9NPB3 220 aa21.22■□□□□ 0.99
MCF2L-208ENST00000397030 IPO7O95373 1038 aaKnown RBP21.21■□□□□ 0.99
MCF2L-208ENST00000397030 BICD2Q8TD16 824 aa21.21■□□□□ 0.99
MCF2L-208ENST00000397030 COG6Q9Y2V7 657 aa21.21■□□□□ 0.99
MCF2L-208ENST00000397030 RALYLQ86SE5 291 aaKnown RBP21.2■□□□□ 0.99
MCF2L-208ENST00000397030 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
MCF2L-208ENST00000397030 RRP12Q5JTH9 1297 aaKnown RBP21.2■□□□□ 0.98
MCF2L-208ENST00000397030 TIMELESSQ9UNS1 1208 aa21.2■□□□□ 0.98
MCF2L-208ENST00000397030 GPRASP1Q5JY77 1395 aa21.2■□□□□ 0.98
MCF2L-208ENST00000397030 KIF15Q9NS87 1388 aa21.2■□□□□ 0.98
MCF2L-208ENST00000397030 DNAJC2Q99543 621 aaKnown RBP21.2■□□□□ 0.98
MCF2L-208ENST00000397030 TOM1L2Q6ZVM7 507 aa21.19■□□□□ 0.98
MCF2L-208ENST00000397030 SAFBQ15424 915 aaKnown RBP eCLIP21.19■□□□□ 0.98
MCF2L-208ENST00000397030 HSP90AB2PQ58FF8 381 aa21.19■□□□□ 0.98
MCF2L-208ENST00000397030 BICDL1Q6ZP65 573 aa21.18■□□□□ 0.98
MCF2L-208ENST00000397030 VPS37CA5D8V6 355 aaPredicted RBP21.18■□□□□ 0.98
MCF2L-208ENST00000397030 HOOK1Q9UJC3 728 aaKnown RBP21.18■□□□□ 0.98
MCF2L-208ENST00000397030 RNF20Q5VTR2 975 aa21.17■□□□□ 0.98
MCF2L-208ENST00000397030 BRMS1Q9HCU9 246 aa21.17■□□□□ 0.98
MCF2L-208ENST00000397030 CNNM1Q9NRU3 951 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms