RNA–Protein interactions for RNA: ENST00000396394.6

PSMA1-201, Transcript of proteasome subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA1, Length 1,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-201ENST00000396394 ZFYVE9O95405 1425 aa18.9■□□□□ 0.62
PSMA1-201ENST00000396394 TOM1O60784 492 aa18.9■□□□□ 0.62
PSMA1-201ENST00000396394 RIMS2Q9UQ26 1411 aa18.89■□□□□ 0.61
PSMA1-201ENST00000396394 PPP1R15AO75807 674 aaPredicted RBP18.88■□□□□ 0.61
PSMA1-201ENST00000396394 PLEKHG1Q9ULL1 1385 aa18.88■□□□□ 0.61
PSMA1-201ENST00000396394 SLC26A8Q96RN1 970 aa18.87■□□□□ 0.61
PSMA1-201ENST00000396394 LRRC7Q96NW7 1537 aa18.87■□□□□ 0.61
PSMA1-201ENST00000396394 ACIN1Q9UKV3 1341 aaKnown RBP18.87■□□□□ 0.61
PSMA1-201ENST00000396394 KCNA6P17658 529 aa18.86■□□□□ 0.61
PSMA1-201ENST00000396394 BCANQ96GW7 911 aa18.86■□□□□ 0.61
PSMA1-201ENST00000396394 SLC4A1APQ9BWU0 796 aaKnown RBP18.86■□□□□ 0.61
PSMA1-201ENST00000396394 STRCP1A6NGW2 1772 aa18.85■□□□□ 0.61
PSMA1-201ENST00000396394 SPHKAPQ2M3C7 1700 aa18.84■□□□□ 0.61
PSMA1-201ENST00000396394 MYO5BQ9ULV0 1848 aa18.83■□□□□ 0.61
PSMA1-201ENST00000396394 TBX22Q9Y458 520 aa18.83■□□□□ 0.6
PSMA1-201ENST00000396394 TRPM2O94759 1503 aa18.81■□□□□ 0.6
PSMA1-201ENST00000396394 NUTM2DQ5VT03 806 aaPredicted RBP18.79■□□□□ 0.6
PSMA1-201ENST00000396394 ZNF326Q5BKZ1 582 aaKnown RBP18.79■□□□□ 0.6
PSMA1-201ENST00000396394 PIP4K2BP78356 416 aa18.78■□□□□ 0.6
PSMA1-201ENST00000396394 MPHOSPH9Q99550 1183 aa18.78■□□□□ 0.6
PSMA1-201ENST00000396394 SETD5Q9C0A6 1442 aa18.77■□□□□ 0.6
PSMA1-201ENST00000396394 PROSER2Q86WR7 435 aaPredicted RBP18.76■□□□□ 0.59
PSMA1-201ENST00000396394 CLTCL1P53675 1640 aa18.75■□□□□ 0.59
PSMA1-201ENST00000396394 NKTRP30414 1462 aaKnown RBP18.75■□□□□ 0.59
PSMA1-201ENST00000396394 ADAMTS13Q76LX8 1427 aa18.75■□□□□ 0.59
PSMA1-201ENST00000396394 TMEM94Q12767 1356 aa18.75■□□□□ 0.59
PSMA1-201ENST00000396394 PIK3R4Q99570 1358 aa18.75■□□□□ 0.59
PSMA1-201ENST00000396394 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
PSMA1-201ENST00000396394 SENP3Q9H4L4 574 aaPredicted RBP18.75■□□□□ 0.59
PSMA1-201ENST00000396394 NWD1Q149M9 1564 aa18.74■□□□□ 0.59
PSMA1-201ENST00000396394 DIP2AQ14689 1571 aa18.73■□□□□ 0.59
PSMA1-201ENST00000396394 ALKQ9UM73 1620 aa18.73■□□□□ 0.59
PSMA1-201ENST00000396394 RPGRIP1LQ68CZ1 1315 aa18.72■□□□□ 0.59
PSMA1-201ENST00000396394 FOXD1Q16676 465 aa18.72■□□□□ 0.59
PSMA1-201ENST00000396394 CHD2O14647 1828 aaKnown RBP18.7■□□□□ 0.58
PSMA1-201ENST00000396394 KIF1BO60333 1816 aa18.7■□□□□ 0.58
PSMA1-201ENST00000396394 VGFO15240 615 aaPredicted RBP18.7■□□□□ 0.58
PSMA1-201ENST00000396394 CLSPNQ9HAW4 1339 aa18.7■□□□□ 0.58
PSMA1-201ENST00000396394 HSPA1LP34931 641 aa18.69■□□□□ 0.58
PSMA1-201ENST00000396394 NCOA3Q9Y6Q9 1424 aa18.69■□□□□ 0.58
PSMA1-201ENST00000396394 XIRP1Q702N8 1843 aaKnown RBP18.69■□□□□ 0.58
PSMA1-201ENST00000396394 SETBP1Q9Y6X0 1596 aa18.69■□□□□ 0.58
PSMA1-201ENST00000396394 NEXMIFQ5QGS0 1516 aa18.68■□□□□ 0.58
PSMA1-201ENST00000396394 RAB3GAP2Q9H2M9 1393 aa18.68■□□□□ 0.58
PSMA1-201ENST00000396394 CCDC144AA2RUR9 1427 aa18.68■□□□□ 0.58
PSMA1-201ENST00000396394 RBM33Q96EV2 1170 aaKnown RBP18.68■□□□□ 0.58
PSMA1-201ENST00000396394 AMOTL2Q9Y2J4 779 aa18.68■□□□□ 0.58
PSMA1-201ENST00000396394 MSH6P52701 1360 aa18.66■□□□□ 0.58
PSMA1-201ENST00000396394 NRXN3Q9Y4C0 1643 aa18.64■□□□□ 0.58
PSMA1-201ENST00000396394 FAM135BQ49AJ0 1406 aa18.64■□□□□ 0.57
PSMA1-201ENST00000396394 PTPRUQ92729 1446 aa18.63■□□□□ 0.57
PSMA1-201ENST00000396394 METP08581 1390 aa18.62■□□□□ 0.57
PSMA1-201ENST00000396394 C19orf44Q9H6X5 657 aa18.61■□□□□ 0.57
PSMA1-201ENST00000396394 SLAIN2Q9P270 581 aa18.61■□□□□ 0.57
PSMA1-201ENST00000396394 SPATA31E1Q6ZUB1 1445 aa18.6■□□□□ 0.57
PSMA1-201ENST00000396394 RGL3Q3MIN7 710 aa18.59■□□□□ 0.57
PSMA1-201ENST00000396394 C14orf37Q86TY3 774 aa18.59■□□□□ 0.57
PSMA1-201ENST00000396394 DISP3Q9P2K9 1392 aa18.59■□□□□ 0.57
PSMA1-201ENST00000396394 CADPS2Q86UW7 1296 aa18.59■□□□□ 0.57
PSMA1-201ENST00000396394 ANKRD30BQ9BXX2 1392 aa18.58■□□□□ 0.57
PSMA1-201ENST00000396394 ATF3P18847 181 aa18.56■□□□□ 0.56
PSMA1-201ENST00000396394 XRN1Q8IZH2 1706 aaKnown RBP18.56■□□□□ 0.56
PSMA1-201ENST00000396394 PPLO60437 1756 aa18.56■□□□□ 0.56
PSMA1-201ENST00000396394 ADGRF5Q8IZF2 1346 aa18.54■□□□□ 0.56
PSMA1-201ENST00000396394 DCCP43146 1447 aa18.53■□□□□ 0.56
PSMA1-201ENST00000396394 DHX57Q6P158 1386 aaKnown RBP18.51■□□□□ 0.55
PSMA1-201ENST00000396394 ROBO1Q9Y6N7 1651 aa18.51■□□□□ 0.55
PSMA1-201ENST00000396394 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.51■□□□□ 0.55
PSMA1-201ENST00000396394 PRAG1Q86YV5 1406 aa18.51■□□□□ 0.55
PSMA1-201ENST00000396394 PTCH1Q13635 1447 aa18.5■□□□□ 0.55
PSMA1-201ENST00000396394 SETD1AO15047 1707 aaKnown RBP18.5■□□□□ 0.55
PSMA1-201ENST00000396394 IFT172Q9UG01 1749 aa18.47■□□□□ 0.55
PSMA1-201ENST00000396394 PIK3C2GO75747 1445 aa18.47■□□□□ 0.55
PSMA1-201ENST00000396394 ADGRL3Q9HAR2 1447 aa18.47■□□□□ 0.55
PSMA1-201ENST00000396394 ROBO2Q9HCK4 1378 aa18.47■□□□□ 0.55
PSMA1-201ENST00000396394 ZNF316A6NFI3 1004 aaPredicted RBP18.45■□□□□ 0.54
PSMA1-201ENST00000396394 STAC3Q96MF2 364 aa18.45■□□□□ 0.54
PSMA1-201ENST00000396394 C14orf93Q9H972 538 aaKnown RBP18.45■□□□□ 0.54
PSMA1-201ENST00000396394 MYOM2P54296 1465 aa18.44■□□□□ 0.54
PSMA1-201ENST00000396394 NRXN1Q9ULB1 1477 aa18.44■□□□□ 0.54
PSMA1-201ENST00000396394 MED1Q15648 1581 aaPredicted RBP18.44■□□□□ 0.54
PSMA1-201ENST00000396394 BRINP3Q76B58 766 aa18.44■□□□□ 0.54
PSMA1-201ENST00000396394 LRPPRCP42704 1394 aaKnown RBP18.43■□□□□ 0.54
PSMA1-201ENST00000396394 ABCC11Q96J66 1382 aa18.43■□□□□ 0.54
PSMA1-201ENST00000396394 MST1RQ04912 1400 aa18.42■□□□□ 0.54
PSMA1-201ENST00000396394 ILDR2Q71H61 639 aa18.42■□□□□ 0.54
PSMA1-201ENST00000396394 TECPR2O15040 1411 aa18.42■□□□□ 0.54
PSMA1-201ENST00000396394 TMEM132EQ6IEE7 984 aa18.41■□□□□ 0.54
PSMA1-201ENST00000396394 SIRT1Q96EB6 747 aa18.4■□□□□ 0.54
PSMA1-201ENST00000396394 STK26Q9P289 416 aa18.4■□□□□ 0.54
PSMA1-201ENST00000396394 JCADQ9P266 1359 aa18.4■□□□□ 0.54
PSMA1-201ENST00000396394 DIEXFQ68CQ4 756 aaKnown RBP18.39■□□□□ 0.54
PSMA1-201ENST00000396394 PHLPP1O60346 1717 aa18.39■□□□□ 0.53
PSMA1-201ENST00000396394 CFAP70Q5T0N1 1121 aa18.39■□□□□ 0.53
PSMA1-201ENST00000396394 DCAF11Q8TEB1 546 aa18.39■□□□□ 0.53
PSMA1-201ENST00000396394 PHF23Q9BUL5 403 aaPredicted RBP18.39■□□□□ 0.53
PSMA1-201ENST00000396394 NALCNQ8IZF0 1738 aa18.38■□□□□ 0.53
PSMA1-201ENST00000396394 AHDC1Q5TGY3 1603 aaPredicted RBP18.38■□□□□ 0.53
PSMA1-201ENST00000396394 YTHDC2Q9H6S0 1430 aaKnown RBP18.38■□□□□ 0.53
PSMA1-201ENST00000396394 C1orf167Q5SNV9 1468 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms