RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 DIP2CQ9Y2E4 1556 aa18.76■□□□□ 0.59
CCHCR1-203ENST00000396268 ZBTB47Q9UFB7 747 aaPredicted RBP18.75■□□□□ 0.59
CCHCR1-203ENST00000396268 EIF2AK4Q9P2K8 1649 aaKnown RBP18.75■□□□□ 0.59
CCHCR1-203ENST00000396268 CEP152O94986 1710 aa18.75■□□□□ 0.59
CCHCR1-203ENST00000396268 KIF13AQ9H1H9 1805 aa18.75■□□□□ 0.59
CCHCR1-203ENST00000396268 RALBP1Q15311 655 aa18.74■□□□□ 0.59
CCHCR1-203ENST00000396268 NBPF1Q3BBV0 1214 aa18.74■□□□□ 0.59
CCHCR1-203ENST00000396268 TET3O43151 1660 aa18.74■□□□□ 0.59
CCHCR1-203ENST00000396268 COL17A1Q9UMD9 1497 aaPredicted RBP18.73■□□□□ 0.59
CCHCR1-203ENST00000396268 LAS1LQ9Y4W2 734 aaKnown RBP18.72■□□□□ 0.59
CCHCR1-203ENST00000396268 BRD4O60885 1362 aaPredicted RBP18.71■□□□□ 0.59
CCHCR1-203ENST00000396268 CLTCL1P53675 1640 aa18.71■□□□□ 0.59
CCHCR1-203ENST00000396268 WASHC2CQ9Y4E1 1318 aa18.71■□□□□ 0.59
CCHCR1-203ENST00000396268 SPHKAPQ2M3C7 1700 aa18.71■□□□□ 0.58
CCHCR1-203ENST00000396268 PTPRTO14522 1441 aa18.71■□□□□ 0.58
CCHCR1-203ENST00000396268 IPO9Q96P70 1041 aaKnown RBP18.7■□□□□ 0.58
CCHCR1-203ENST00000396268 TRPM2O94759 1503 aa18.69■□□□□ 0.58
CCHCR1-203ENST00000396268 RNF17Q9BXT8 1623 aaKnown RBP18.69■□□□□ 0.58
CCHCR1-203ENST00000396268 PRAG1Q86YV5 1406 aa18.69■□□□□ 0.58
CCHCR1-203ENST00000396268 LRPPRCP42704 1394 aaKnown RBP18.69■□□□□ 0.58
CCHCR1-203ENST00000396268 EFCAB6Q5THR3 1501 aa18.68■□□□□ 0.58
CCHCR1-203ENST00000396268 RRP1P56182 461 aaKnown RBP18.68■□□□□ 0.58
CCHCR1-203ENST00000396268 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.68■□□□□ 0.58
CCHCR1-203ENST00000396268 NLRP13Q86W25 1043 aa18.67■□□□□ 0.58
CCHCR1-203ENST00000396268 EXOC6Q8TAG9 804 aa18.67■□□□□ 0.58
CCHCR1-203ENST00000396268 RCAN3Q9UKA8 241 aa18.67■□□□□ 0.58
CCHCR1-203ENST00000396268 NPATQ14207 1427 aa18.67■□□□□ 0.58
CCHCR1-203ENST00000396268 KTN1Q86UP2 1357 aaKnown RBP18.66■□□□□ 0.58
CCHCR1-203ENST00000396268 CC2D1BQ5T0F9 858 aaKnown RBP18.65■□□□□ 0.58
CCHCR1-203ENST00000396268 ABCC3O15438 1527 aa18.64■□□□□ 0.57
CCHCR1-203ENST00000396268 CHGAP10645 457 aaKnown RBP18.64■□□□□ 0.57
CCHCR1-203ENST00000396268 MLECQ14165 292 aa18.63■□□□□ 0.57
CCHCR1-203ENST00000396268 SIGLEC1Q9BZZ2 1709 aa18.62■□□□□ 0.57
CCHCR1-203ENST00000396268 TRPM1Q7Z4N2 1603 aa18.62■□□□□ 0.57
CCHCR1-203ENST00000396268 LMTK2Q8IWU2 1503 aa18.61■□□□□ 0.57
CCHCR1-203ENST00000396268 CDCA7LQ96GN5 454 aa18.61■□□□□ 0.57
CCHCR1-203ENST00000396268 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
CCHCR1-203ENST00000396268 ZMYM4Q5VZL5 1548 aa18.6■□□□□ 0.57
CCHCR1-203ENST00000396268 NEFMP07197 916 aa18.58■□□□□ 0.56
CCHCR1-203ENST00000396268 NUTM2DQ5VT03 806 aaPredicted RBP18.58■□□□□ 0.56
CCHCR1-203ENST00000396268 SKAP1Q86WV1 359 aa18.58■□□□□ 0.56
CCHCR1-203ENST00000396268 PARD3Q8TEW0 1356 aa18.58■□□□□ 0.56
CCHCR1-203ENST00000396268 MROH2AA6NES4 1674 aa18.57■□□□□ 0.56
CCHCR1-203ENST00000396268 PER1O15534 1290 aaPredicted RBP18.57■□□□□ 0.56
CCHCR1-203ENST00000396268 PDE3BQ13370 1112 aa18.57■□□□□ 0.56
CCHCR1-203ENST00000396268 FBXO31Q5XUX0 539 aaPredicted RBP18.57■□□□□ 0.56
CCHCR1-203ENST00000396268 ADGRF5Q8IZF2 1346 aa18.57■□□□□ 0.56
CCHCR1-203ENST00000396268 CAMSAP1Q5T5Y3 1602 aa18.57■□□□□ 0.56
CCHCR1-203ENST00000396268 PANK3Q9H999 370 aa18.56■□□□□ 0.56
CCHCR1-203ENST00000396268 PLIN1O60240 522 aa18.56■□□□□ 0.56
CCHCR1-203ENST00000396268 TRHP20396 242 aaPredicted RBP18.56■□□□□ 0.56
CCHCR1-203ENST00000396268 TCERG1O14776 1098 aaKnown RBP18.54■□□□□ 0.56
CCHCR1-203ENST00000396268 MADDQ8WXG6 1647 aa18.53■□□□□ 0.56
CCHCR1-203ENST00000396268 DISP3Q9P2K9 1392 aa18.53■□□□□ 0.56
CCHCR1-203ENST00000396268 CFAP70Q5T0N1 1121 aa18.52■□□□□ 0.56
CCHCR1-203ENST00000396268 KIF1BO60333 1816 aa18.52■□□□□ 0.55
CCHCR1-203ENST00000396268 PDE4AP27815 886 aa18.51■□□□□ 0.55
CCHCR1-203ENST00000396268 TESK2Q96S53 571 aa18.51■□□□□ 0.55
CCHCR1-203ENST00000396268 TMF1P82094 1093 aa18.51■□□□□ 0.55
CCHCR1-203ENST00000396268 SYNMO15061 1565 aa18.51■□□□□ 0.55
CCHCR1-203ENST00000396268 GPRASP1Q5JY77 1395 aa18.51■□□□□ 0.55
CCHCR1-203ENST00000396268 IDI1Q13907 227 aa18.51■□□□□ 0.55
CCHCR1-203ENST00000396268 NOS1P29475 1434 aa18.49■□□□□ 0.55
CCHCR1-203ENST00000396268 SLC4A3P48751 1232 aa18.47■□□□□ 0.55
CCHCR1-203ENST00000396268 ADGRB3O60242 1522 aa18.47■□□□□ 0.55
CCHCR1-203ENST00000396268 CRBNQ96SW2 442 aa18.47■□□□□ 0.55
CCHCR1-203ENST00000396268 BACH2Q9BYV9 841 aa18.45■□□□□ 0.54
CCHCR1-203ENST00000396268 ARHGEF40Q8TER5 1519 aa18.45■□□□□ 0.54
CCHCR1-203ENST00000396268 BRPF3Q9ULD4 1205 aa18.44■□□□□ 0.54
CCHCR1-203ENST00000396268 ADAMTS8Q9UP79 889 aa18.44■□□□□ 0.54
CCHCR1-203ENST00000396268 CLTCQ00610 1675 aaKnown RBP18.44■□□□□ 0.54
CCHCR1-203ENST00000396268 ARHGAP31Q2M1Z3 1444 aa18.43■□□□□ 0.54
CCHCR1-203ENST00000396268 IFT172Q9UG01 1749 aa18.43■□□□□ 0.54
CCHCR1-203ENST00000396268 ZC3H13Q5T200 1668 aaKnown RBP18.43■□□□□ 0.54
CCHCR1-203ENST00000396268 KNSTRNQ9Y448 316 aa18.42■□□□□ 0.54
CCHCR1-203ENST00000396268 MS4A1P11836 297 aa18.42■□□□□ 0.54
CCHCR1-203ENST00000396268 TMEM132EQ6IEE7 984 aa18.42■□□□□ 0.54
CCHCR1-203ENST00000396268 PREX1Q8TCU6 1659 aa18.42■□□□□ 0.54
CCHCR1-203ENST00000396268 WDR43Q15061 677 aaKnown RBP eCLIP18.41■□□□□ 0.54
CCHCR1-203ENST00000396268 PIK3C2BO00750 1634 aa18.41■□□□□ 0.54
CCHCR1-203ENST00000396268 AGLP35573 1532 aa18.41■□□□□ 0.54
CCHCR1-203ENST00000396268 REREQ9P2R6 1566 aa18.41■□□□□ 0.54
CCHCR1-203ENST00000396268 C20orf194Q5TEA3 1177 aa18.4■□□□□ 0.54
CCHCR1-203ENST00000396268 MYO5BQ9ULV0 1848 aa18.4■□□□□ 0.54
CCHCR1-203ENST00000396268 BLMP54132 1417 aaPredicted RBP18.4■□□□□ 0.54
CCHCR1-203ENST00000396268 EIF5BO60841 1220 aaKnown RBP18.39■□□□□ 0.54
CCHCR1-203ENST00000396268 MYOM2P54296 1465 aa18.39■□□□□ 0.54
CCHCR1-203ENST00000396268 LAMC1P11047 1609 aa18.39■□□□□ 0.53
CCHCR1-203ENST00000396268 NEURL4Q96JN8 1562 aa18.39■□□□□ 0.53
CCHCR1-203ENST00000396268 PPLO60437 1756 aa18.38■□□□□ 0.53
CCHCR1-203ENST00000396268 PLPPR3Q6T4P5 718 aa18.38■□□□□ 0.53
CCHCR1-203ENST00000396268 ERVK-7P63135 1459 aa18.37■□□□□ 0.53
CCHCR1-203ENST00000396268 IQGAP1P46940 1657 aa18.37■□□□□ 0.53
CCHCR1-203ENST00000396268 NRXN1Q9ULB1 1477 aa18.36■□□□□ 0.53
CCHCR1-203ENST00000396268 PPP2R1AP30153 589 aa18.36■□□□□ 0.53
CCHCR1-203ENST00000396268 SCAF11Q99590 1463 aaKnown RBP18.36■□□□□ 0.53
CCHCR1-203ENST00000396268 SLC52A1Q9NWF4 448 aa18.36■□□□□ 0.53
CCHCR1-203ENST00000396268 TRAK1Q9UPV9 953 aa18.36■□□□□ 0.53
CCHCR1-203ENST00000396268 STAC3Q96MF2 364 aa18.35■□□□□ 0.53
CCHCR1-203ENST00000396268 PIK3C2GO75747 1445 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms