RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 TMF1P82094 1093 aa16.62■□□□□ 0.25
ITGB1-202ENST00000396033 SUPT16HQ9Y5B9 1047 aaKnown RBP16.61■□□□□ 0.25
ITGB1-202ENST00000396033 ADGRF5Q8IZF2 1346 aa16.61■□□□□ 0.25
ITGB1-202ENST00000396033 FAM9BQ8IZU0 186 aa16.6■□□□□ 0.25
ITGB1-202ENST00000396033 SIGLEC1Q9BZZ2 1709 aa16.6■□□□□ 0.25
ITGB1-202ENST00000396033 NOS1P29475 1434 aa16.6■□□□□ 0.25
ITGB1-202ENST00000396033 TSHZ2Q9NRE2 1034 aa16.59■□□□□ 0.25
ITGB1-202ENST00000396033 EIF3AQ14152 1382 aaKnown RBP16.59■□□□□ 0.25
ITGB1-202ENST00000396033 CFAP70Q5T0N1 1121 aa16.58■□□□□ 0.24
ITGB1-202ENST00000396033 NRXN1Q9ULB1 1477 aa16.58■□□□□ 0.24
ITGB1-202ENST00000396033 ARHGAP31Q2M1Z3 1444 aa16.58■□□□□ 0.24
ITGB1-202ENST00000396033 SYNMO15061 1565 aa16.57■□□□□ 0.24
ITGB1-202ENST00000396033 PPLO60437 1756 aa16.56■□□□□ 0.24
ITGB1-202ENST00000396033 KIF13AQ9H1H9 1805 aa16.56■□□□□ 0.24
ITGB1-202ENST00000396033 PIK3C2BO00750 1634 aa16.56■□□□□ 0.24
ITGB1-202ENST00000396033 KTN1Q86UP2 1357 aaKnown RBP16.56■□□□□ 0.24
ITGB1-202ENST00000396033 BCL11AQ9H165 835 aa16.54■□□□□ 0.24
ITGB1-202ENST00000396033 RALBP1Q15311 655 aa16.54■□□□□ 0.24
ITGB1-202ENST00000396033 REREQ9P2R6 1566 aa16.53■□□□□ 0.24
ITGB1-202ENST00000396033 RPGRIP1LQ68CZ1 1315 aa16.53■□□□□ 0.24
ITGB1-202ENST00000396033 PIK3C2GO75747 1445 aa16.52■□□□□ 0.24
ITGB1-202ENST00000396033 MYBBP1AQ9BQG0 1328 aaKnown RBP16.52■□□□□ 0.24
ITGB1-202ENST00000396033 CDCA8Q53HL2 280 aa16.52■□□□□ 0.23
ITGB1-202ENST00000396033 PANK3Q9H999 370 aa16.52■□□□□ 0.23
ITGB1-202ENST00000396033 PREX1Q8TCU6 1659 aa16.51■□□□□ 0.23
ITGB1-202ENST00000396033 PER1O15534 1290 aaPredicted RBP16.51■□□□□ 0.23
ITGB1-202ENST00000396033 AGLP35573 1532 aa16.51■□□□□ 0.23
ITGB1-202ENST00000396033 SETBP1Q9Y6X0 1596 aa16.5■□□□□ 0.23
ITGB1-202ENST00000396033 TMC1Q8TDI8 760 aa16.5■□□□□ 0.23
ITGB1-202ENST00000396033 PARD3Q8TEW0 1356 aa16.49■□□□□ 0.23
ITGB1-202ENST00000396033 SLC52A1Q9NWF4 448 aa16.49■□□□□ 0.23
ITGB1-202ENST00000396033 BRD4O60885 1362 aaPredicted RBP16.48■□□□□ 0.23
ITGB1-202ENST00000396033 NEXMIFQ5QGS0 1516 aa16.48■□□□□ 0.23
ITGB1-202ENST00000396033 IDI1Q13907 227 aa16.48■□□□□ 0.23
ITGB1-202ENST00000396033 ARHGEF40Q8TER5 1519 aa16.48■□□□□ 0.23
ITGB1-202ENST00000396033 ANP32EQ9BTT0 268 aa16.47■□□□□ 0.23
ITGB1-202ENST00000396033 ZBED9Q6R2W3 1325 aa16.47■□□□□ 0.23
ITGB1-202ENST00000396033 C14orf93Q9H972 538 aaKnown RBP16.47■□□□□ 0.23
ITGB1-202ENST00000396033 KDM5AP29375 1690 aaKnown RBP16.47■□□□□ 0.23
ITGB1-202ENST00000396033 MYO3AQ8NEV4 1616 aa16.46■□□□□ 0.23
ITGB1-202ENST00000396033 CC2D1BQ5T0F9 858 aaKnown RBP16.46■□□□□ 0.23
ITGB1-202ENST00000396033 NUTM2DQ5VT03 806 aaPredicted RBP16.46■□□□□ 0.23
ITGB1-202ENST00000396033 SLC24A1O60721 1099 aa16.46■□□□□ 0.22
ITGB1-202ENST00000396033 VGFO15240 615 aaPredicted RBP16.45■□□□□ 0.22
ITGB1-202ENST00000396033 ADGRB1O14514 1584 aa16.45■□□□□ 0.22
ITGB1-202ENST00000396033 ERVK-7P63135 1459 aa16.45■□□□□ 0.22
ITGB1-202ENST00000396033 NEFLP07196 543 aa16.45■□□□□ 0.22
ITGB1-202ENST00000396033 PNISRQ8TF01 805 aaKnown RBP16.45■□□□□ 0.22
ITGB1-202ENST00000396033 PPP6R1Q9UPN7 881 aa16.45■□□□□ 0.22
ITGB1-202ENST00000396033 CLTCQ00610 1675 aaKnown RBP16.44■□□□□ 0.22
ITGB1-202ENST00000396033 NLRP13Q86W25 1043 aa16.44■□□□□ 0.22
ITGB1-202ENST00000396033 MYOM1P52179 1685 aa16.44■□□□□ 0.22
ITGB1-202ENST00000396033 FBXO31Q5XUX0 539 aaPredicted RBP16.44■□□□□ 0.22
ITGB1-202ENST00000396033 CENPJQ9HC77 1338 aaPredicted RBP16.43■□□□□ 0.22
ITGB1-202ENST00000396033 FKBP8Q14318 412 aa16.43■□□□□ 0.22
ITGB1-202ENST00000396033 MLECQ14165 292 aa16.43■□□□□ 0.22
ITGB1-202ENST00000396033 TRAK1Q9UPV9 953 aa16.43■□□□□ 0.22
ITGB1-202ENST00000396033 MYO5BQ9ULV0 1848 aa16.43■□□□□ 0.22
ITGB1-202ENST00000396033 TMEM131LA2VDJ0 1609 aa16.43■□□□□ 0.22
ITGB1-202ENST00000396033 TMEM132EQ6IEE7 984 aa16.42■□□□□ 0.22
ITGB1-202ENST00000396033 KNSTRNQ9Y448 316 aa16.42■□□□□ 0.22
ITGB1-202ENST00000396033 SBNO2Q9Y2G9 1366 aa16.42■□□□□ 0.22
ITGB1-202ENST00000396033 LRPPRCP42704 1394 aaKnown RBP16.4■□□□□ 0.22
ITGB1-202ENST00000396033 QRICH2Q9H0J4 1663 aa16.4■□□□□ 0.22
ITGB1-202ENST00000396033 ZFYVE9O95405 1425 aa16.4■□□□□ 0.22
ITGB1-202ENST00000396033 STAG3Q9UJ98 1225 aa16.37■□□□□ 0.21
ITGB1-202ENST00000396033 ASXL1Q8IXJ9 1541 aa16.37■□□□□ 0.21
ITGB1-202ENST00000396033 SPATA31D1Q6ZQQ2 1576 aa16.37■□□□□ 0.21
ITGB1-202ENST00000396033 BCANQ96GW7 911 aa16.36■□□□□ 0.21
ITGB1-202ENST00000396033 AMER1Q5JTC6 1135 aaPredicted RBP16.36■□□□□ 0.21
ITGB1-202ENST00000396033 SENP3Q9H4L4 574 aaPredicted RBP16.35■□□□□ 0.21
ITGB1-202ENST00000396033 ARHGEF28Q8N1W1 1705 aaKnown RBP16.35■□□□□ 0.21
ITGB1-202ENST00000396033 ESF1Q9H501 851 aaKnown RBP16.35■□□□□ 0.21
ITGB1-202ENST00000396033 SENP3-EIF4A1A0A087X0R7 540 aa16.33■□□□□ 0.2
ITGB1-202ENST00000396033 NPC1L1Q9UHC9 1359 aa16.32■□□□□ 0.2
ITGB1-202ENST00000396033 A2ML1A8K2U0 1454 aa16.31■□□□□ 0.2
ITGB1-202ENST00000396033 PPP2R1AP30153 589 aa16.3■□□□□ 0.2
ITGB1-202ENST00000396033 ZMYM3Q14202 1370 aa16.3■□□□□ 0.2
ITGB1-202ENST00000396033 STK26Q9P289 416 aa16.3■□□□□ 0.2
ITGB1-202ENST00000396033 SMG6Q86US8 1419 aaKnown RBP16.29■□□□□ 0.2
ITGB1-202ENST00000396033 EVC2Q86UK5 1308 aa16.28■□□□□ 0.2
ITGB1-202ENST00000396033 CARD14Q9BXL6 1004 aa16.28■□□□□ 0.2
ITGB1-202ENST00000396033 TULP4Q9NRJ4 1543 aa16.28■□□□□ 0.2
ITGB1-202ENST00000396033 ALKQ9UM73 1620 aa16.28■□□□□ 0.2
ITGB1-202ENST00000396033 RIMS2Q9UQ26 1411 aa16.27■□□□□ 0.2
ITGB1-202ENST00000396033 SAFB2Q14151 953 aaKnown RBP eCLIP16.27■□□□□ 0.2
ITGB1-202ENST00000396033 NUDCQ9Y266 331 aa16.27■□□□□ 0.2
ITGB1-202ENST00000396033 YTHDC2Q9H6S0 1430 aaKnown RBP16.27■□□□□ 0.19
ITGB1-202ENST00000396033 IRX6P78412 446 aaPredicted RBP16.26■□□□□ 0.19
ITGB1-202ENST00000396033 BLMP54132 1417 aaPredicted RBP16.26■□□□□ 0.19
ITGB1-202ENST00000396033 INSRP06213 1382 aa16.25■□□□□ 0.19
ITGB1-202ENST00000396033 SLC12A5Q9H2X9 1139 aa16.25■□□□□ 0.19
ITGB1-202ENST00000396033 NSD3Q9BZ95 1437 aa16.25■□□□□ 0.19
ITGB1-202ENST00000396033 PTPRMP28827 1452 aa16.25■□□□□ 0.19
ITGB1-202ENST00000396033 PUS7Q96PZ0 661 aaKnown RBP16.24■□□□□ 0.19
ITGB1-202ENST00000396033 TNRQ92752 1358 aa16.23■□□□□ 0.19
ITGB1-202ENST00000396033 PRAM1Q96QH2 718 aa16.23■□□□□ 0.19
ITGB1-202ENST00000396033 POGKQ9P215 609 aa16.23■□□□□ 0.19
ITGB1-202ENST00000396033 SALL2Q9Y467 1007 aaPredicted RBP16.23■□□□□ 0.19
ITGB1-202ENST00000396033 WDR43Q15061 677 aaKnown RBP eCLIP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms