RNA–Protein interactions for RNA: ENST00000395792.6

AFP-202, Transcript of alpha fetoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFP, Length 2,484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-202ENST00000395792 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.59□□□□□ -1.03
AFP-202ENST00000395792 MYT1LQ9UL68 1186 aa8.59□□□□□ -1.03
AFP-202ENST00000395792 SPATA31E1Q6ZUB1 1445 aa8.59□□□□□ -1.03
AFP-202ENST00000395792 KIAA1210Q9ULL0 1709 aa8.59□□□□□ -1.03
AFP-202ENST00000395792 KIF3BO15066 747 aa8.59□□□□□ -1.03
AFP-202ENST00000395792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.59□□□□□ -1.031e-323■□□□□ 8.6
AFP-202ENST00000395792 KIF1BO60333 1816 aa8.59□□□□□ -1.03
AFP-202ENST00000395792 TRPM1Q7Z4N2 1603 aa8.59□□□□□ -1.04
AFP-202ENST00000395792 CNTLNQ9NXG0 1405 aa8.58□□□□□ -1.04
AFP-202ENST00000395792 GPRASP1Q5JY77 1395 aa8.57□□□□□ -1.04
AFP-202ENST00000395792 PUS7Q96PZ0 661 aaKnown RBP8.57□□□□□ -1.04
AFP-202ENST00000395792 FOXD4L1Q9NU39 408 aa8.57□□□□□ -1.04
AFP-202ENST00000395792 CAMSAP1Q5T5Y3 1602 aa8.57□□□□□ -1.04
AFP-202ENST00000395792 PRAG1Q86YV5 1406 aa8.57□□□□□ -1.04
AFP-202ENST00000395792 NBPF8Q3BBV2 869 aa8.57□□□□□ -1.04
AFP-202ENST00000395792 ABCC3O15438 1527 aa8.57□□□□□ -1.04
AFP-202ENST00000395792 CLTCL1P53675 1640 aa8.56□□□□□ -1.04
AFP-202ENST00000395792 ZBTB7CA1YPR0 619 aa8.56□□□□□ -1.04
AFP-202ENST00000395792 HSPA5P11021 654 aaKnown RBP8.56□□□□□ -1.04
AFP-202ENST00000395792 TSHZ2Q9NRE2 1034 aa8.56□□□□□ -1.04
AFP-202ENST00000395792 MYOM2P54296 1465 aa8.55□□□□□ -1.04
AFP-202ENST00000395792 ROCK2O75116 1388 aaKnown RBP8.55□□□□□ -1.04
AFP-202ENST00000395792 IFT172Q9UG01 1749 aa8.54□□□□□ -1.04
AFP-202ENST00000395792 TSPOAP1O95153 1857 aa8.54□□□□□ -1.04
AFP-202ENST00000395792 RPGRIP1LQ68CZ1 1315 aa8.54□□□□□ -1.04
AFP-202ENST00000395792 ARHGEF40Q8TER5 1519 aa8.54□□□□□ -1.04
AFP-202ENST00000395792 PIK3C2BO00750 1634 aa8.53□□□□□ -1.04
AFP-202ENST00000395792 MADDQ8WXG6 1647 aa8.53□□□□□ -1.04
AFP-202ENST00000395792 NOS1P29475 1434 aa8.53□□□□□ -1.04
AFP-202ENST00000395792 CCER2I3L3R5 266 aa8.53□□□□□ -1.04
AFP-202ENST00000395792 DCAF11Q8TEB1 546 aa8.53□□□□□ -1.04
AFP-202ENST00000395792 ADGRB3O60242 1522 aa8.53□□□□□ -1.04
AFP-202ENST00000395792 USP47Q96K76 1375 aa8.53□□□□□ -1.04
AFP-202ENST00000395792 RAPGEF3O95398 923 aa8.53□□□□□ -1.04
AFP-202ENST00000395792 MIER1Q8N108 512 aa8.53□□□□□ -1.04
AFP-202ENST00000395792 CCDC7Q96M83 1385 aa8.52□□□□□ -1.05
AFP-202ENST00000395792 CENPBP07199 599 aaPredicted RBP8.52□□□□□ -1.05
AFP-202ENST00000395792 BBXQ8WY36 941 aaPredicted RBP8.52□□□□□ -1.05
AFP-202ENST00000395792 WASHC2CQ9Y4E1 1318 aa8.52□□□□□ -1.05
AFP-202ENST00000395792 NPATQ14207 1427 aa8.51□□□□□ -1.05
AFP-202ENST00000395792 NRXN1Q9ULB1 1477 aa8.51□□□□□ -1.05
AFP-202ENST00000395792 CARD11Q9BXL7 1154 aa8.51□□□□□ -1.05
AFP-202ENST00000395792 YEATS2Q9ULM3 1422 aa8.5□□□□□ -1.05
AFP-202ENST00000395792 ANP32CO43423 234 aa8.5□□□□□ -1.05
AFP-202ENST00000395792 SLC52A1Q9NWF4 448 aa8.5□□□□□ -1.05
AFP-202ENST00000395792 SETBP1Q9Y6X0 1596 aa8.5□□□□□ -1.05
AFP-202ENST00000395792 DDX10Q13206 875 aaKnown RBP8.49□□□□□ -1.05
AFP-202ENST00000395792 PKNOX2Q96KN3 472 aa8.49□□□□□ -1.05
AFP-202ENST00000395792 ARID3AQ99856 593 aa8.49□□□□□ -1.05
AFP-202ENST00000395792 POLR3GLQ9BT43 218 aa8.49□□□□□ -1.05
AFP-202ENST00000395792 IQGAP1P46940 1657 aa8.49□□□□□ -1.05
AFP-202ENST00000395792 PREX1Q8TCU6 1659 aa8.49□□□□□ -1.05
AFP-202ENST00000395792 PPLO60437 1756 aa8.49□□□□□ -1.05
AFP-202ENST00000395792 WASHC2AQ641Q2 1341 aa8.49□□□□□ -1.05
AFP-202ENST00000395792 ZFYVE9O95405 1425 aa8.49□□□□□ -1.05
AFP-202ENST00000395792 GGT6Q6P531 493 aa8.48□□□□□ -1.05
AFP-202ENST00000395792 KTN1Q86UP2 1357 aaKnown RBP8.48□□□□□ -1.05
AFP-202ENST00000395792 EIF3AQ14152 1382 aaKnown RBP8.47□□□□□ -1.05
AFP-202ENST00000395792 MROH2AA6NES4 1674 aa8.47□□□□□ -1.05
AFP-202ENST00000395792 KDM5AP29375 1690 aaKnown RBP8.47□□□□□ -1.05
AFP-202ENST00000395792 SYNMO15061 1565 aa8.47□□□□□ -1.05
AFP-202ENST00000395792 SCAF11Q99590 1463 aaKnown RBP8.47□□□□□ -1.05
AFP-202ENST00000395792 SIGLEC1Q9BZZ2 1709 aa8.47□□□□□ -1.05
AFP-202ENST00000395792 PIAS4Q8N2W9 510 aaPredicted RBP8.46□□□□□ -1.05
AFP-202ENST00000395792 SPATA31D1Q6ZQQ2 1576 aa8.46□□□□□ -1.05
AFP-202ENST00000395792 RGL3Q3MIN7 710 aa8.46□□□□□ -1.06
AFP-202ENST00000395792 CDCA8Q53HL2 280 aa8.46□□□□□ -1.06
AFP-202ENST00000395792 KIF7Q2M1P5 1343 aa8.46□□□□□ -1.06
AFP-202ENST00000395792 MYO3AQ8NEV4 1616 aa8.46□□□□□ -1.06
AFP-202ENST00000395792 ZNF326Q5BKZ1 582 aaKnown RBP8.45□□□□□ -1.06
AFP-202ENST00000395792 ERVK-7P63135 1459 aa8.45□□□□□ -1.06
AFP-202ENST00000395792 NECTIN2Q92692 538 aa8.44□□□□□ -1.06
AFP-202ENST00000395792 CLTCQ00610 1675 aaKnown RBP8.44□□□□□ -1.06
AFP-202ENST00000395792 COL17A1Q9UMD9 1497 aaPredicted RBP8.44□□□□□ -1.06
AFP-202ENST00000395792 UGGT1Q9NYU2 1555 aa8.44□□□□□ -1.06
AFP-202ENST00000395792 TMEM131LA2VDJ0 1609 aa8.44□□□□□ -1.06
AFP-202ENST00000395792 VGFO15240 615 aaPredicted RBP8.43□□□□□ -1.06
AFP-202ENST00000395792 SBNO2Q9Y2G9 1366 aa8.43□□□□□ -1.06
AFP-202ENST00000395792 PIK3C2GO75747 1445 aa8.43□□□□□ -1.06
AFP-202ENST00000395792 NEXMIFQ5QGS0 1516 aa8.43□□□□□ -1.06
AFP-202ENST00000395792 TMF1P82094 1093 aa8.43□□□□□ -1.06
AFP-202ENST00000395792 HIRIP3Q9BW71 556 aaPredicted RBP8.43□□□□□ -1.06
AFP-202ENST00000395792 ST20-MTHFSA0A0A6YYL1 179 aa8.42□□□□□ -1.06
AFP-202ENST00000395792 BCL11BQ9C0K0 894 aaPredicted RBP8.42□□□□□ -1.06
AFP-202ENST00000395792 C11orf95C9JLR9 678 aaPredicted RBP8.41□□□□□ -1.06
AFP-202ENST00000395792 C14orf93Q9H972 538 aaKnown RBP8.41□□□□□ -1.06
AFP-202ENST00000395792 CFAP65Q6ZU64 1925 aaKnown RBP8.4□□□□□ -1.06
AFP-202ENST00000395792 NBPF1Q3BBV0 1214 aa8.4□□□□□ -1.07
AFP-202ENST00000395792 TESK2Q96S53 571 aa8.4□□□□□ -1.07
AFP-202ENST00000395792 BCCIPQ9P287 314 aaKnown RBP eCLIP8.4□□□□□ -1.07
AFP-202ENST00000395792 HDGFP51858 240 aaKnown RBP8.39□□□□□ -1.07
AFP-202ENST00000395792 ESF1Q9H501 851 aaKnown RBP8.39□□□□□ -1.07
AFP-202ENST00000395792 ADGRB1O14514 1584 aa8.39□□□□□ -1.07
AFP-202ENST00000395792 TRHP20396 242 aaPredicted RBP8.38□□□□□ -1.07
AFP-202ENST00000395792 IDI1Q13907 227 aa8.38□□□□□ -1.07
AFP-202ENST00000395792 RALBP1Q15311 655 aa8.38□□□□□ -1.07
AFP-202ENST00000395792 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.38□□□□□ -1.07
AFP-202ENST00000395792 ZMYND15Q9H091 742 aa8.38□□□□□ -1.07
AFP-202ENST00000395792 PRKRIP1Q9H875 184 aaPredicted RBP8.38□□□□□ -1.07
AFP-202ENST00000395792 ADGRF5Q8IZF2 1346 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms