RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 ARHGAP35Q9NRY4 1499 aa13.61□□□□□ -0.23
PFDN6-205ENST00000395134 TMCO4Q5TGY1 634 aa13.61□□□□□ -0.23
PFDN6-205ENST00000395134 PHLDB1Q86UU1 1377 aa13.6□□□□□ -0.23
PFDN6-205ENST00000395134 AKNAQ7Z591 1439 aa13.6□□□□□ -0.23
PFDN6-205ENST00000395134 MS4A4AQ96JQ5 239 aa13.6□□□□□ -0.23
PFDN6-205ENST00000395134 DENND4BO75064 1496 aaPredicted RBP13.6□□□□□ -0.23
PFDN6-205ENST00000395134 MTMR7Q9Y216 660 aa13.59□□□□□ -0.23
PFDN6-205ENST00000395134 PTPRMP28827 1452 aa13.59□□□□□ -0.23
PFDN6-205ENST00000395134 PDIA6Q15084 440 aa13.58□□□□□ -0.24
PFDN6-205ENST00000395134 ILDR1Q86SU0 546 aaPredicted RBP13.58□□□□□ -0.24
PFDN6-205ENST00000395134 FNBP4Q8N3X1 1017 aaPredicted RBP13.58□□□□□ -0.24
PFDN6-205ENST00000395134 CCDC61Q9Y6R9 512 aa13.58□□□□□ -0.24
PFDN6-205ENST00000395134 DPYSL4O14531 572 aa13.57□□□□□ -0.24
PFDN6-205ENST00000395134 FER1L4A9Z1Z3 1794 aa13.57□□□□□ -0.24
PFDN6-205ENST00000395134 ZMYM4Q5VZL5 1548 aa13.56□□□□□ -0.24
PFDN6-205ENST00000395134 ZFYVE16Q7Z3T8 1539 aa13.56□□□□□ -0.24
PFDN6-205ENST00000395134 PPP1R15BQ5SWA1 713 aa13.56□□□□□ -0.24
PFDN6-205ENST00000395134 PCF11O94913 1555 aaKnown RBP13.56□□□□□ -0.24
PFDN6-205ENST00000395134 FMN1Q68DA7 1419 aa13.56□□□□□ -0.24
PFDN6-205ENST00000395134 YEATS2Q9ULM3 1422 aa13.56□□□□□ -0.24
PFDN6-205ENST00000395134 IFNL1Q8IU54 200 aa13.55□□□□□ -0.24
PFDN6-205ENST00000395134 REM2Q8IYK8 340 aaPredicted RBP13.54□□□□□ -0.24
PFDN6-205ENST00000395134 GZF1Q9H116 711 aaPredicted RBP13.54□□□□□ -0.24
PFDN6-205ENST00000395134 MFAP1P55081 439 aaKnown RBP13.53□□□□□ -0.24
PFDN6-205ENST00000395134 CDC42BPBQ9Y5S2 1711 aa13.53□□□□□ -0.24
PFDN6-205ENST00000395134 ARHGAP5Q13017 1502 aa13.52□□□□□ -0.25
PFDN6-205ENST00000395134 POGZQ7Z3K3 1410 aa13.51□□□□□ -0.25
PFDN6-205ENST00000395134 SCAPERQ9BY12 1400 aa13.51□□□□□ -0.25
PFDN6-205ENST00000395134 MLECQ14165 292 aa13.51□□□□□ -0.25
PFDN6-205ENST00000395134 TTLL12Q14166 644 aaPredicted RBP13.51□□□□□ -0.25
PFDN6-205ENST00000395134 RETREG2Q8NC44 543 aa13.51□□□□□ -0.25
PFDN6-205ENST00000395134 EMILIN3Q9NT22 766 aa13.51□□□□□ -0.25
PFDN6-205ENST00000395134 PLCH2O75038 1416 aa13.5□□□□□ -0.25
PFDN6-205ENST00000395134 NUTM2FA1L443 756 aa13.5□□□□□ -0.25
PFDN6-205ENST00000395134 GNPATO15228 680 aa13.5□□□□□ -0.25
PFDN6-205ENST00000395134 IGSF3O75054 1194 aa13.49□□□□□ -0.25
PFDN6-205ENST00000395134 TROQ12816 1431 aaPredicted RBP13.48□□□□□ -0.25
PFDN6-205ENST00000395134 CDC42BPAQ5VT25 1732 aa13.48□□□□□ -0.25
PFDN6-205ENST00000395134 SH3D19Q5HYK7 790 aa13.48□□□□□ -0.25
PFDN6-205ENST00000395134 POM121Q96HA1 1249 aa13.48□□□□□ -0.25
PFDN6-205ENST00000395134 RBM42Q9BTD8 480 aaKnown RBP13.48□□□□□ -0.25
PFDN6-205ENST00000395134 GPHNQ9NQX3 736 aaPredicted RBP13.48□□□□□ -0.25
PFDN6-205ENST00000395134 PREX2Q70Z35 1606 aa13.48□□□□□ -0.25
PFDN6-205ENST00000395134 LMTK3Q96Q04 1460 aa13.48□□□□□ -0.25
PFDN6-205ENST00000395134 MS4A1P11836 297 aa13.47□□□□□ -0.25
PFDN6-205ENST00000395134 CLIP1P30622 1438 aa13.47□□□□□ -0.25
PFDN6-205ENST00000395134 FOXD4L5Q5VV16 416 aaPredicted RBP13.46□□□□□ -0.25
PFDN6-205ENST00000395134 FOXD4L4Q8WXT5 416 aaPredicted RBP13.46□□□□□ -0.25
PFDN6-205ENST00000395134 ITSN2Q9NZM3 1697 aa13.46□□□□□ -0.26
PFDN6-205ENST00000395134 RBM25P49756 843 aaKnown RBP13.45□□□□□ -0.26
PFDN6-205ENST00000395134 IRF5Q13568 498 aa13.45□□□□□ -0.26
PFDN6-205ENST00000395134 HIC1Q14526 733 aa13.45□□□□□ -0.26
PFDN6-205ENST00000395134 GIGYF2Q6Y7W6 1299 aaKnown RBP13.45□□□□□ -0.26
PFDN6-205ENST00000395134 PLSCR2Q9NRY7 297 aa13.45□□□□□ -0.26
PFDN6-205ENST00000395134 CDK11AQ9UQ88 783 aaPredicted RBP13.45□□□□□ -0.26
PFDN6-205ENST00000395134 ABCA6Q8N139 1617 aa13.45□□□□□ -0.26
PFDN6-205ENST00000395134 MAGI2Q86UL8 1455 aa13.44□□□□□ -0.26
PFDN6-205ENST00000395134 EFCAB2Q5VUJ9 269 aa13.44□□□□□ -0.26
PFDN6-205ENST00000395134 KDM5CP41229 1560 aa13.43□□□□□ -0.26
PFDN6-205ENST00000395134 HSPA2P54652 639 aa13.43□□□□□ -0.26
PFDN6-205ENST00000395134 MYT1LQ9UL68 1186 aa13.43□□□□□ -0.26
PFDN6-205ENST00000395134 DIP2CQ9Y2E4 1556 aa13.43□□□□□ -0.26
PFDN6-205ENST00000395134 CCDC18Q5T9S5 1454 aa13.42□□□□□ -0.26
PFDN6-205ENST00000395134 C9orf84Q5VXU9 1444 aa13.42□□□□□ -0.26
PFDN6-205ENST00000395134 CASKIN1Q8WXD9 1431 aa13.42□□□□□ -0.26
PFDN6-205ENST00000395134 ATP10AO60312 1499 aa13.42□□□□□ -0.26
PFDN6-205ENST00000395134 ZNF518AQ6AHZ1 1483 aa13.42□□□□□ -0.26
PFDN6-205ENST00000395134 ABCC1P33527 1531 aa13.41□□□□□ -0.26
PFDN6-205ENST00000395134 ARHGEF12Q9NZN5 1544 aa13.41□□□□□ -0.26
PFDN6-205ENST00000395134 FECHP22830 423 aa13.41□□□□□ -0.26
PFDN6-205ENST00000395134 PREX1Q8TCU6 1659 aa13.4□□□□□ -0.26
PFDN6-205ENST00000395134 GRXCR2A6NFK2 248 aa13.4□□□□□ -0.26
PFDN6-205ENST00000395134 MAP3K13O43283 966 aa13.4□□□□□ -0.26
PFDN6-205ENST00000395134 FCHSD2O94868 740 aa13.4□□□□□ -0.26
PFDN6-205ENST00000395134 AFAP1Q8N556 730 aa13.4□□□□□ -0.26
PFDN6-205ENST00000395134 ZNF428Q96B54 188 aa13.4□□□□□ -0.26
PFDN6-205ENST00000395134 FARP1Q9Y4F1 1045 aaPredicted RBP13.4□□□□□ -0.26
PFDN6-205ENST00000395134 FYCO1Q9BQS8 1478 aa13.4□□□□□ -0.26
PFDN6-205ENST00000395134 SKIV2LQ15477 1246 aaKnown RBP13.39□□□□□ -0.27
PFDN6-205ENST00000395134 OXER1Q8TDS5 423 aa13.39□□□□□ -0.27
PFDN6-205ENST00000395134 KIDINS220Q9ULH0 1771 aa13.38□□□□□ -0.27
PFDN6-205ENST00000395134 FBXW7Q969H0 707 aa13.38□□□□□ -0.27
PFDN6-205ENST00000395134 TRAPPC8Q9Y2L5 1435 aa13.38□□□□□ -0.27
PFDN6-205ENST00000395134 SETD1BQ9UPS6 1966 aaKnown RBP13.38□□□□□ -0.27
PFDN6-205ENST00000395134 PPP1R15AO75807 674 aaPredicted RBP13.37□□□□□ -0.27
PFDN6-205ENST00000395134 PDE4CQ08493 712 aa13.37□□□□□ -0.27
PFDN6-205ENST00000395134 CHADLQ6NUI6 762 aa13.37□□□□□ -0.27
PFDN6-205ENST00000395134 C3P01024 1663 aa13.37□□□□□ -0.27
PFDN6-205ENST00000395134 SAMD9LQ8IVG5 1584 aa13.37□□□□□ -0.27
PFDN6-205ENST00000395134 CEBPAP49715 358 aaPredicted RBP13.36□□□□□ -0.27
PFDN6-205ENST00000395134 REPIN1Q9BWE0 567 aaKnown RBP13.36□□□□□ -0.27
PFDN6-205ENST00000395134 COG6Q9Y2V7 657 aa13.36□□□□□ -0.27
PFDN6-205ENST00000395134 SUPT6HQ7KZ85 1726 aaKnown RBP13.36□□□□□ -0.27
PFDN6-205ENST00000395134 SYCP2Q9BX26 1530 aa13.35□□□□□ -0.27
PFDN6-205ENST00000395134 PITPNM1O00562 1244 aa13.35□□□□□ -0.27
PFDN6-205ENST00000395134 KIF12Q96FN5 646 aa13.35□□□□□ -0.27
PFDN6-205ENST00000395134 SPDYE5A6NIY4 337 aa13.34□□□□□ -0.27
PFDN6-205ENST00000395134 E9PSI1 815 aa13.34□□□□□ -0.27
PFDN6-205ENST00000395134 ZNF330Q9Y3S2 320 aaPredicted RBP13.34□□□□□ -0.27
PFDN6-205ENST00000395134 PATL2C9JE40 543 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms