RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 EFCAB2Q5VUJ9 269 aa14.28□□□□□ -0.12
HIF1A-203ENST00000394997 NEO1Q92859 1461 aa14.28□□□□□ -0.12
HIF1A-203ENST00000394997 NOS1P29475 1434 aa14.27□□□□□ -0.12
HIF1A-203ENST00000394997 ST20-MTHFSA0A0A6YYL1 179 aa14.27□□□□□ -0.13
HIF1A-203ENST00000394997 NPATQ14207 1427 aa14.27□□□□□ -0.13
HIF1A-203ENST00000394997 CLTCQ00610 1675 aaKnown RBP14.27□□□□□ -0.13
HIF1A-203ENST00000394997 ZBED9Q6R2W3 1325 aa14.27□□□□□ -0.13
HIF1A-203ENST00000394997 BLMP54132 1417 aaPredicted RBP14.27□□□□□ -0.13
HIF1A-203ENST00000394997 ERVK-7P63135 1459 aa14.26□□□□□ -0.13
HIF1A-203ENST00000394997 INSRP06213 1382 aa14.26□□□□□ -0.13
HIF1A-203ENST00000394997 PIK3C2GO75747 1445 aa14.25□□□□□ -0.13
HIF1A-203ENST00000394997 SMG6Q86US8 1419 aaKnown RBP14.24□□□□□ -0.13
HIF1A-203ENST00000394997 PNISRQ8TF01 805 aaKnown RBP14.24□□□□□ -0.13
HIF1A-203ENST00000394997 KTN1Q86UP2 1357 aaKnown RBP14.24□□□□□ -0.13
HIF1A-203ENST00000394997 DCAF11Q8TEB1 546 aa14.24□□□□□ -0.13
HIF1A-203ENST00000394997 TSHZ2Q9NRE2 1034 aa14.23□□□□□ -0.13
HIF1A-203ENST00000394997 SCAF11Q99590 1463 aaKnown RBP14.23□□□□□ -0.13
HIF1A-203ENST00000394997 CFAP65Q6ZU64 1925 aaKnown RBP14.23□□□□□ -0.13
HIF1A-203ENST00000394997 FKBP8Q14318 412 aa14.21□□□□□ -0.14
HIF1A-203ENST00000394997 ANKRD26Q9UPS8 1709 aa14.2□□□□□ -0.14
HIF1A-203ENST00000394997 NRXN3Q9Y4C0 1643 aa14.2□□□□□ -0.14
HIF1A-203ENST00000394997 SPAG9O60271 1321 aaKnown RBP14.2□□□□□ -0.14
HIF1A-203ENST00000394997 ARHGAP31Q2M1Z3 1444 aa14.2□□□□□ -0.14
HIF1A-203ENST00000394997 CARD11Q9BXL7 1154 aa14.19□□□□□ -0.14
HIF1A-203ENST00000394997 BRD4O60885 1362 aaPredicted RBP14.19□□□□□ -0.14
HIF1A-203ENST00000394997 CD109Q6YHK3 1445 aa14.18□□□□□ -0.14
HIF1A-203ENST00000394997 TULP4Q9NRJ4 1543 aa14.17□□□□□ -0.14
HIF1A-203ENST00000394997 SBNO2Q9Y2G9 1366 aa14.16□□□□□ -0.14
HIF1A-203ENST00000394997 YEATS2Q9ULM3 1422 aa14.13□□□□□ -0.15
HIF1A-203ENST00000394997 NPC1L1Q9UHC9 1359 aa14.12□□□□□ -0.15
HIF1A-203ENST00000394997 AGLP35573 1532 aa14.12□□□□□ -0.15
HIF1A-203ENST00000394997 MYBBP1AQ9BQG0 1328 aaKnown RBP14.11□□□□□ -0.15
HIF1A-203ENST00000394997 HNRNPUQ00839 825 aaKnown RBP eCLIP14.11□□□□□ -0.157e-6■□□□□ 10.8
HIF1A-203ENST00000394997 KDM2AQ9Y2K7 1162 aa14.11□□□□□ -0.15
HIF1A-203ENST00000394997 SPATA31D1Q6ZQQ2 1576 aa14.11□□□□□ -0.15
HIF1A-203ENST00000394997 WASHC2CQ9Y4E1 1318 aa14.1□□□□□ -0.15
HIF1A-203ENST00000394997 ADGRF5Q8IZF2 1346 aa14.1□□□□□ -0.15
HIF1A-203ENST00000394997 AMER1Q5JTC6 1135 aaPredicted RBP14.09□□□□□ -0.15
HIF1A-203ENST00000394997 ZFYVE9O95405 1425 aa14.09□□□□□ -0.15
HIF1A-203ENST00000394997 KNDC1Q76NI1 1749 aa14.09□□□□□ -0.15
HIF1A-203ENST00000394997 TSPOAP1O95153 1857 aa14.08□□□□□ -0.16
HIF1A-203ENST00000394997 PTPRMP28827 1452 aa14.08□□□□□ -0.16
HIF1A-203ENST00000394997 OSCARQ8IYS5 282 aa14.08□□□□□ -0.16
HIF1A-203ENST00000394997 MRS2Q9HD23 443 aa14.08□□□□□ -0.16
HIF1A-203ENST00000394997 ZNF521Q96K83 1311 aa14.07□□□□□ -0.16
HIF1A-203ENST00000394997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.07□□□□□ -0.168e-7■■□□□ 13.6
HIF1A-203ENST00000394997 STAC3Q96MF2 364 aa14.07□□□□□ -0.16
HIF1A-203ENST00000394997 IQSEC2Q5JU85 1478 aa14.07□□□□□ -0.16
HIF1A-203ENST00000394997 CD163L1Q9NR16 1453 aa14.07□□□□□ -0.16
HIF1A-203ENST00000394997 NLRP1Q9C000 1473 aa14.06□□□□□ -0.16
HIF1A-203ENST00000394997 ARHGEF40Q8TER5 1519 aa14.06□□□□□ -0.16
HIF1A-203ENST00000394997 ADGRB2O60241 1585 aa14.06□□□□□ -0.16
HIF1A-203ENST00000394997 ZNF326Q5BKZ1 582 aaKnown RBP14.05□□□□□ -0.16
HIF1A-203ENST00000394997 RALBP1Q15311 655 aa14.05□□□□□ -0.16
HIF1A-203ENST00000394997 RGL3Q3MIN7 710 aa14.05□□□□□ -0.16
HIF1A-203ENST00000394997 KIF20BQ96Q89 1820 aa14.04□□□□□ -0.16
HIF1A-203ENST00000394997 ERICH6BQ5W0A0 696 aa14.02□□□□□ -0.17
HIF1A-203ENST00000394997 CNGB1Q14028 1251 aaPredicted RBP14.01□□□□□ -0.17
HIF1A-203ENST00000394997 FAM9BQ8IZU0 186 aa14.01□□□□□ -0.17
HIF1A-203ENST00000394997 COL3A1P02461 1466 aaPredicted RBP14.01□□□□□ -0.17
HIF1A-203ENST00000394997 KIF3BO15066 747 aa14□□□□□ -0.17
HIF1A-203ENST00000394997 CARD14Q9BXL6 1004 aa14□□□□□ -0.17
HIF1A-203ENST00000394997 ALKQ9UM73 1620 aa14□□□□□ -0.17
HIF1A-203ENST00000394997 UBR1Q8IWV7 1749 aa14□□□□□ -0.17
HIF1A-203ENST00000394997 VIRMAQ69YN4 1812 aaKnown RBP14□□□□□ -0.17
HIF1A-203ENST00000394997 PANK3Q9H999 370 aa13.99□□□□□ -0.17
HIF1A-203ENST00000394997 AKAP12Q02952 1782 aa13.99□□□□□ -0.17
HIF1A-203ENST00000394997 TOPAZ1Q8N9V7 1692 aa13.99□□□□□ -0.17
HIF1A-203ENST00000394997 NRKQ7Z2Y5 1582 aa13.99□□□□□ -0.17
HIF1A-203ENST00000394997 NUDCQ9Y266 331 aa13.98□□□□□ -0.17
HIF1A-203ENST00000394997 KANK1Q14678 1352 aa13.98□□□□□ -0.17
HIF1A-203ENST00000394997 PLEKHH1Q9ULM0 1364 aa13.98□□□□□ -0.17
HIF1A-203ENST00000394997 MON2Q7Z3U7 1717 aa13.98□□□□□ -0.17
HIF1A-203ENST00000394997 IRX6P78412 446 aaPredicted RBP13.97□□□□□ -0.17
HIF1A-203ENST00000394997 C14orf93Q9H972 538 aaKnown RBP13.96□□□□□ -0.17
HIF1A-203ENST00000394997 CFAP70Q5T0N1 1121 aa13.96□□□□□ -0.17
HIF1A-203ENST00000394997 NLRP13Q86W25 1043 aa13.96□□□□□ -0.17
HIF1A-203ENST00000394997 CDC42BPGQ6DT37 1551 aa13.96□□□□□ -0.17
HIF1A-203ENST00000394997 DLC1Q96QB1 1528 aa13.96□□□□□ -0.18
HIF1A-203ENST00000394997 TRMT2AQ8IZ69 625 aaKnown RBP13.95□□□□□ -0.18
HIF1A-203ENST00000394997 MARF1Q9Y4F3 1742 aaKnown RBP13.95□□□□□ -0.18
HIF1A-203ENST00000394997 MYT1LQ9UL68 1186 aa13.95□□□□□ -0.18
HIF1A-203ENST00000394997 RAPGEF3O95398 923 aa13.94□□□□□ -0.18
HIF1A-203ENST00000394997 NBR1Q14596 966 aa13.94□□□□□ -0.18
HIF1A-203ENST00000394997 C3P01024 1663 aa13.93□□□□□ -0.18
HIF1A-203ENST00000394997 A2ML1A8K2U0 1454 aa13.92□□□□□ -0.18
HIF1A-203ENST00000394997 PPP2R1AP30153 589 aa13.92□□□□□ -0.18
HIF1A-203ENST00000394997 RTL5Q5HYW3 569 aaPredicted RBP13.92□□□□□ -0.18
HIF1A-203ENST00000394997 NALCNQ8IZF0 1738 aa13.91□□□□□ -0.18
HIF1A-203ENST00000394997 TMF1P82094 1093 aa13.91□□□□□ -0.18
HIF1A-203ENST00000394997 RBM19Q9Y4C8 960 aaKnown RBP13.91□□□□□ -0.18
HIF1A-203ENST00000394997 MSH5O43196 834 aa13.9□□□□□ -0.18
HIF1A-203ENST00000394997 MED14O60244 1454 aa13.9□□□□□ -0.18
HIF1A-203ENST00000394997 RIMS1Q86UR5 1692 aaKnown RBP13.9□□□□□ -0.18
HIF1A-203ENST00000394997 CPS1P31327 1500 aa13.89□□□□□ -0.19
HIF1A-203ENST00000394997 RPGRIP1LQ68CZ1 1315 aa13.89□□□□□ -0.19
HIF1A-203ENST00000394997 EIF3AQ14152 1382 aaKnown RBP13.88□□□□□ -0.19
HIF1A-203ENST00000394997 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.88□□□□□ -0.19
HIF1A-203ENST00000394997 PHF23Q9BUL5 403 aaPredicted RBP13.87□□□□□ -0.19
HIF1A-203ENST00000394997 POLR3AO14802 1390 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms