RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 ZNF326Q5BKZ1 582 aaKnown RBP29.34■■■□□ 2.29
SNCA-203ENST00000394986 SENP3Q9H4L4 574 aaPredicted RBP29.34■■■□□ 2.29
SNCA-203ENST00000394986 IQGAP1P46940 1657 aa29.33■■■□□ 2.29
SNCA-203ENST00000394986 ANKRD30BQ9BXX2 1392 aa29.3■■■□□ 2.28
SNCA-203ENST00000394986 PPP1R15AO75807 674 aaPredicted RBP29.3■■■□□ 2.28
SNCA-203ENST00000394986 KIF1BO60333 1816 aa29.29■■■□□ 2.28
SNCA-203ENST00000394986 ZNF335Q9H4Z2 1342 aaPredicted RBP29.28■■■□□ 2.28
SNCA-203ENST00000394986 PCGF6Q9BYE7 350 aa29.27■■■□□ 2.28
SNCA-203ENST00000394986 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.26■■■□□ 2.27
SNCA-203ENST00000394986 NEXMIFQ5QGS0 1516 aa29.25■■■□□ 2.27
SNCA-203ENST00000394986 HDGFP51858 240 aaKnown RBP29.25■■■□□ 2.27
SNCA-203ENST00000394986 PLEKHG1Q9ULL1 1385 aa29.24■■■□□ 2.27
SNCA-203ENST00000394986 SPATA31E1Q6ZUB1 1445 aa29.24■■■□□ 2.27
SNCA-203ENST00000394986 BCANQ96GW7 911 aa29.23■■■□□ 2.27
SNCA-203ENST00000394986 RGL3Q3MIN7 710 aa29.22■■■□□ 2.27
SNCA-203ENST00000394986 SLC26A8Q96RN1 970 aa29.22■■■□□ 2.27
SNCA-203ENST00000394986 LTBP4Q8N2S1 1624 aa29.19■■■□□ 2.26
SNCA-203ENST00000394986 DHX57Q6P158 1386 aaKnown RBP29.18■■■□□ 2.26
SNCA-203ENST00000394986 RPGRIP1LQ68CZ1 1315 aa29.14■■■□□ 2.26
SNCA-203ENST00000394986 ADAMTS13Q76LX8 1427 aa29.14■■■□□ 2.26
SNCA-203ENST00000394986 PPLO60437 1756 aa29.11■■■□□ 2.25
SNCA-203ENST00000394986 NRXN3Q9Y4C0 1643 aa29.1■■■□□ 2.25
SNCA-203ENST00000394986 CERKQ8TCT0 537 aa29.1■■■□□ 2.25
SNCA-203ENST00000394986 SETBP1Q9Y6X0 1596 aa29.09■■■□□ 2.25
SNCA-203ENST00000394986 VGFO15240 615 aaPredicted RBP29.09■■■□□ 2.25
SNCA-203ENST00000394986 STRCP1A6NGW2 1772 aa29.07■■■□□ 2.24
SNCA-203ENST00000394986 ADGRF5Q8IZF2 1346 aa29.07■■■□□ 2.24
SNCA-203ENST00000394986 TBX22Q9Y458 520 aa29.06■■■□□ 2.24
SNCA-203ENST00000394986 IFT172Q9UG01 1749 aa29.05■■■□□ 2.24
SNCA-203ENST00000394986 DIP2AQ14689 1571 aa29.04■■■□□ 2.24
SNCA-203ENST00000394986 CPS1P31327 1500 aa29.03■■■□□ 2.24
SNCA-203ENST00000394986 SIN3AQ96ST3 1273 aa29.03■■■□□ 2.24
SNCA-203ENST00000394986 KCNA6P17658 529 aa29.01■■■□□ 2.23
SNCA-203ENST00000394986 METP08581 1390 aa28.99■■■□□ 2.23
SNCA-203ENST00000394986 NWD1Q149M9 1564 aa28.99■■■□□ 2.23
SNCA-203ENST00000394986 LRRC7Q96NW7 1537 aa28.97■■■□□ 2.23
SNCA-203ENST00000394986 MYOM2P54296 1465 aa28.97■■■□□ 2.23
SNCA-203ENST00000394986 PTPRUQ92729 1446 aa28.97■■■□□ 2.23
SNCA-203ENST00000394986 ALKQ9UM73 1620 aa28.97■■■□□ 2.23
SNCA-203ENST00000394986 DCAF11Q8TEB1 546 aa28.96■■■□□ 2.23
SNCA-203ENST00000394986 PIK3C2GO75747 1445 aa28.96■■■□□ 2.23
SNCA-203ENST00000394986 NEUROD1Q13562 356 aa28.95■■■□□ 2.23
SNCA-203ENST00000394986 KDM2AQ9Y2K7 1162 aa28.95■■■□□ 2.23
SNCA-203ENST00000394986 PIK3R4Q99570 1358 aa28.95■■■□□ 2.22
SNCA-203ENST00000394986 NRXN1Q9ULB1 1477 aa28.93■■■□□ 2.22
SNCA-203ENST00000394986 RBM33Q96EV2 1170 aaKnown RBP28.93■■■□□ 2.22
SNCA-203ENST00000394986 SETD1AO15047 1707 aaKnown RBP28.93■■■□□ 2.22
SNCA-203ENST00000394986 CHD2O14647 1828 aaKnown RBP28.92■■■□□ 2.22
SNCA-203ENST00000394986 NKTRP30414 1462 aaKnown RBP28.91■■■□□ 2.22
SNCA-203ENST00000394986 AMOTL2Q9Y2J4 779 aa28.91■■■□□ 2.22
SNCA-203ENST00000394986 IQSEC2Q5JU85 1478 aa28.9■■■□□ 2.22
SNCA-203ENST00000394986 PROSER2Q86WR7 435 aaPredicted RBP28.89■■■□□ 2.22
SNCA-203ENST00000394986 TMEM94Q12767 1356 aa28.88■■■□□ 2.21
SNCA-203ENST00000394986 XRN1Q8IZH2 1706 aaKnown RBP28.86■■■□□ 2.21
SNCA-203ENST00000394986 ASXL1Q8IXJ9 1541 aa28.85■■■□□ 2.21
SNCA-203ENST00000394986 CFAP70Q5T0N1 1121 aa28.85■■■□□ 2.21
SNCA-203ENST00000394986 L3MBTL2Q969R5 705 aa28.84■■■□□ 2.21
SNCA-203ENST00000394986 TMEM132EQ6IEE7 984 aa28.83■■■□□ 2.21
SNCA-203ENST00000394986 C14orf93Q9H972 538 aaKnown RBP28.82■■■□□ 2.2
SNCA-203ENST00000394986 XIRP1Q702N8 1843 aaKnown RBP28.82■■■□□ 2.2
SNCA-203ENST00000394986 FBXO41Q8TF61 875 aa28.81■■■□□ 2.2
SNCA-203ENST00000394986 STAC3Q96MF2 364 aa28.79■■■□□ 2.2
SNCA-203ENST00000394986 UBAP1LF5GYI3 381 aa28.78■■■□□ 2.2
SNCA-203ENST00000394986 STK26Q9P289 416 aa28.77■■■□□ 2.2
SNCA-203ENST00000394986 LAMC1P11047 1609 aa28.76■■■□□ 2.19
SNCA-203ENST00000394986 ILDR1Q86SU0 546 aaPredicted RBP28.76■■■□□ 2.19
SNCA-203ENST00000394986 ROBO2Q9HCK4 1378 aa28.76■■■□□ 2.19
SNCA-203ENST00000394986 PTCH1Q13635 1447 aa28.74■■■□□ 2.19
SNCA-203ENST00000394986 PRAG1Q86YV5 1406 aa28.74■■■□□ 2.19
SNCA-203ENST00000394986 LRPPRCP42704 1394 aaKnown RBP28.74■■■□□ 2.19
SNCA-203ENST00000394986 YTHDC2Q9H6S0 1430 aaKnown RBP28.73■■■□□ 2.19
SNCA-203ENST00000394986 C14orf37Q86TY3 774 aa28.73■■■□□ 2.19
SNCA-203ENST00000394986 TONSLQ96HA7 1378 aa28.71■■■□□ 2.19
SNCA-203ENST00000394986 ADGRB1O14514 1584 aa28.71■■■□□ 2.19
SNCA-203ENST00000394986 MSH6P52701 1360 aa28.7■■■□□ 2.18
SNCA-203ENST00000394986 CCER1Q8TC90 406 aaPredicted RBP28.69■■■□□ 2.18
SNCA-203ENST00000394986 NCOA3Q9Y6Q9 1424 aa28.69■■■□□ 2.18
SNCA-203ENST00000394986 TOM1O60784 492 aa28.69■■■□□ 2.18
SNCA-203ENST00000394986 TECPR2O15040 1411 aa28.68■■■□□ 2.18
SNCA-203ENST00000394986 ABCC11Q96J66 1382 aa28.68■■■□□ 2.18
SNCA-203ENST00000394986 PIP4K2BP78356 416 aa28.67■■■□□ 2.18
SNCA-203ENST00000394986 SCAF1Q9H7N4 1312 aaKnown RBP28.65■■■□□ 2.18
SNCA-203ENST00000394986 PLEKHH1Q9ULM0 1364 aa28.65■■■□□ 2.18
SNCA-203ENST00000394986 KNDC1Q76NI1 1749 aa28.64■■■□□ 2.18
SNCA-203ENST00000394986 NBPF1Q3BBV0 1214 aa28.64■■■□□ 2.18
SNCA-203ENST00000394986 WAPLQ7Z5K2 1190 aa28.64■■■□□ 2.18
SNCA-203ENST00000394986 CLSPNQ9HAW4 1339 aa28.64■■■□□ 2.17
SNCA-203ENST00000394986 ADGRL3Q9HAR2 1447 aa28.63■■■□□ 2.17
SNCA-203ENST00000394986 C19orf44Q9H6X5 657 aa28.62■■■□□ 2.17
SNCA-203ENST00000394986 TRAK1Q9UPV9 953 aa28.61■■■□□ 2.17
SNCA-203ENST00000394986 NALCNQ8IZF0 1738 aa28.61■■■□□ 2.17
SNCA-203ENST00000394986 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.61■■■□□ 2.17
SNCA-203ENST00000394986 NBPF8Q3BBV2 869 aa28.6■■■□□ 2.17
SNCA-203ENST00000394986 KIAA1210Q9ULL0 1709 aa28.59■■■□□ 2.17
SNCA-203ENST00000394986 FAM135BQ49AJ0 1406 aa28.57■■■□□ 2.16
SNCA-203ENST00000394986 ATF3P18847 181 aa28.57■■■□□ 2.16
SNCA-203ENST00000394986 PRAM1Q96QH2 718 aa28.57■■■□□ 2.16
SNCA-203ENST00000394986 DLC1Q96QB1 1528 aa28.56■■■□□ 2.16
SNCA-203ENST00000394986 SAFB2Q14151 953 aaKnown RBP eCLIP28.56■■■□□ 2.16
SNCA-203ENST00000394986 TRPM1Q7Z4N2 1603 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms