RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 KIDINS220Q9ULH0 1771 aa20.84■□□□□ 0.93
PTBP1-204ENST00000394601 NLRP13Q86W25 1043 aa20.84■□□□□ 0.93
PTBP1-204ENST00000394601 IFT172Q9UG01 1749 aa20.83■□□□□ 0.93
PTBP1-204ENST00000394601 BLMP54132 1417 aaPredicted RBP20.82■□□□□ 0.92
PTBP1-204ENST00000394601 MYT1LQ9UL68 1186 aa20.82■□□□□ 0.92
PTBP1-204ENST00000394601 INSRP06213 1382 aa20.82■□□□□ 0.92
PTBP1-204ENST00000394601 PANK3Q9H999 370 aa20.81■□□□□ 0.92
PTBP1-204ENST00000394601 ADGRL1O94910 1474 aa20.8■□□□□ 0.92
PTBP1-204ENST00000394601 UGGT1Q9NYU2 1555 aa20.79■□□□□ 0.92
PTBP1-204ENST00000394601 SYNMO15061 1565 aa20.79■□□□□ 0.92
PTBP1-204ENST00000394601 ASXL2Q76L83 1435 aa20.79■□□□□ 0.92
PTBP1-204ENST00000394601 MROH2AA6NES4 1674 aa20.78■□□□□ 0.92
PTBP1-204ENST00000394601 SCAF11Q99590 1463 aaKnown RBP20.78■□□□□ 0.92
PTBP1-204ENST00000394601 PPRC1Q5VV67 1664 aaKnown RBP20.78■□□□□ 0.92
PTBP1-204ENST00000394601 EFCAB6Q5THR3 1501 aa20.77■□□□□ 0.92
PTBP1-204ENST00000394601 TMF1P82094 1093 aa20.77■□□□□ 0.92
PTBP1-204ENST00000394601 MAP3K4Q9Y6R4 1608 aa20.76■□□□□ 0.91
PTBP1-204ENST00000394601 ABCA6Q8N139 1617 aa20.76■□□□□ 0.91
PTBP1-204ENST00000394601 LMTK2Q8IWU2 1503 aa20.75■□□□□ 0.91
PTBP1-204ENST00000394601 CC2D1BQ5T0F9 858 aaKnown RBP20.74■□□□□ 0.91
PTBP1-204ENST00000394601 MYOM2P54296 1465 aa20.74■□□□□ 0.91
PTBP1-204ENST00000394601 NRXN1Q9ULB1 1477 aa20.73■□□□□ 0.91
PTBP1-204ENST00000394601 NEFMP07197 916 aa20.73■□□□□ 0.91
PTBP1-204ENST00000394601 STAC3Q96MF2 364 aa20.73■□□□□ 0.91
PTBP1-204ENST00000394601 KIF1BO60333 1816 aa20.72■□□□□ 0.91
PTBP1-204ENST00000394601 FRMPD1Q5SYB0 1578 aa20.72■□□□□ 0.91
PTBP1-204ENST00000394601 AMER1Q5JTC6 1135 aaPredicted RBP20.71■□□□□ 0.91
PTBP1-204ENST00000394601 MYO3AQ8NEV4 1616 aa20.69■□□□□ 0.9
PTBP1-204ENST00000394601 KIF3BO15066 747 aa20.68■□□□□ 0.9
PTBP1-204ENST00000394601 KDM5AP29375 1690 aaKnown RBP20.67■□□□□ 0.9
PTBP1-204ENST00000394601 CDCA7LQ96GN5 454 aa20.67■□□□□ 0.9
PTBP1-204ENST00000394601 KANK1Q14678 1352 aa20.67■□□□□ 0.9
PTBP1-204ENST00000394601 RRP1P56182 461 aaKnown RBP20.67■□□□□ 0.9
PTBP1-204ENST00000394601 ADGRB3O60242 1522 aa20.67■□□□□ 0.9
PTBP1-204ENST00000394601 PDE3BQ13370 1112 aa20.66■□□□□ 0.9
PTBP1-204ENST00000394601 ZNF518AQ6AHZ1 1483 aa20.66■□□□□ 0.9
PTBP1-204ENST00000394601 ERVK-7P63135 1459 aa20.65■□□□□ 0.9
PTBP1-204ENST00000394601 ASXL1Q8IXJ9 1541 aa20.65■□□□□ 0.9
PTBP1-204ENST00000394601 BRPF3Q9ULD4 1205 aa20.65■□□□□ 0.9
PTBP1-204ENST00000394601 ADGRF5Q8IZF2 1346 aa20.63■□□□□ 0.89
PTBP1-204ENST00000394601 IPO9Q96P70 1041 aaKnown RBP20.63■□□□□ 0.89
PTBP1-204ENST00000394601 NPC1L1Q9UHC9 1359 aa20.63■□□□□ 0.89
PTBP1-204ENST00000394601 PPLO60437 1756 aa20.62■□□□□ 0.89
PTBP1-204ENST00000394601 PPP2R1AP30153 589 aa20.62■□□□□ 0.89
PTBP1-204ENST00000394601 RCAN3Q9UKA8 241 aa20.62■□□□□ 0.89
PTBP1-204ENST00000394601 ZC3H13Q5T200 1668 aaKnown RBP20.62■□□□□ 0.89
PTBP1-204ENST00000394601 POGZQ7Z3K3 1410 aa20.61■□□□□ 0.89
PTBP1-204ENST00000394601 MLH3Q9UHC1 1453 aa20.6■□□□□ 0.89
PTBP1-204ENST00000394601 ADAMTS8Q9UP79 889 aa20.6■□□□□ 0.89
PTBP1-204ENST00000394601 SETBP1Q9Y6X0 1596 aa20.6■□□□□ 0.89
PTBP1-204ENST00000394601 PIK3C2GO75747 1445 aa20.6■□□□□ 0.89
PTBP1-204ENST00000394601 CFAP74Q9C0B2 1584 aa20.59■□□□□ 0.89
PTBP1-204ENST00000394601 SIGLEC1Q9BZZ2 1709 aa20.59■□□□□ 0.89
PTBP1-204ENST00000394601 CFAP70Q5T0N1 1121 aa20.59■□□□□ 0.89
PTBP1-204ENST00000394601 ZNF521Q96K83 1311 aa20.58■□□□□ 0.89
PTBP1-204ENST00000394601 HECW2Q9P2P5 1572 aa20.58■□□□□ 0.89
PTBP1-204ENST00000394601 NPATQ14207 1427 aa20.58■□□□□ 0.89
PTBP1-204ENST00000394601 PLEKHH1Q9ULM0 1364 aa20.57■□□□□ 0.88
PTBP1-204ENST00000394601 EXOC6Q8TAG9 804 aa20.57■□□□□ 0.88
PTBP1-204ENST00000394601 ADGRB1O14514 1584 aa20.57■□□□□ 0.88
PTBP1-204ENST00000394601 EIF3AQ14152 1382 aaKnown RBP20.57■□□□□ 0.88
PTBP1-204ENST00000394601 ARXQ96QS3 562 aa20.56■□□□□ 0.88
PTBP1-204ENST00000394601 KNSTRNQ9Y448 316 aa20.55■□□□□ 0.88
PTBP1-204ENST00000394601 SBNO2Q9Y2G9 1366 aa20.54■□□□□ 0.88
PTBP1-204ENST00000394601 SLC4A3P48751 1232 aa20.54■□□□□ 0.88
PTBP1-204ENST00000394601 CDCA8Q53HL2 280 aa20.54■□□□□ 0.88
PTBP1-204ENST00000394601 PIK3C2BO00750 1634 aa20.54■□□□□ 0.88
PTBP1-204ENST00000394601 CD109Q6YHK3 1445 aa20.53■□□□□ 0.88
PTBP1-204ENST00000394601 CFAP65Q6ZU64 1925 aaKnown RBP20.53■□□□□ 0.88
PTBP1-204ENST00000394601 ABCC3O15438 1527 aa20.53■□□□□ 0.88
PTBP1-204ENST00000394601 CARD14Q9BXL6 1004 aa20.53■□□□□ 0.88
PTBP1-204ENST00000394601 NOS1P29475 1434 aa20.53■□□□□ 0.88
PTBP1-204ENST00000394601 CAMSAP1Q5T5Y3 1602 aa20.51■□□□□ 0.87
PTBP1-204ENST00000394601 QRICH2Q9H0J4 1663 aa20.5■□□□□ 0.87
PTBP1-204ENST00000394601 SKAP1Q86WV1 359 aa20.49■□□□□ 0.87
PTBP1-204ENST00000394601 DUSP27Q5VZP5 1158 aa20.48■□□□□ 0.87
PTBP1-204ENST00000394601 SHPRHQ149N8 1683 aa20.47■□□□□ 0.87
PTBP1-204ENST00000394601 PLIN1O60240 522 aa20.46■□□□□ 0.87
PTBP1-204ENST00000394601 DIP2CQ9Y2E4 1556 aa20.46■□□□□ 0.87
PTBP1-204ENST00000394601 RICTORQ6R327 1708 aa20.46■□□□□ 0.87
PTBP1-204ENST00000394601 TRMT2AQ8IZ69 625 aaKnown RBP20.45■□□□□ 0.86
PTBP1-204ENST00000394601 OSCARQ8IYS5 282 aa20.44■□□□□ 0.86
PTBP1-204ENST00000394601 C14orf93Q9H972 538 aaKnown RBP20.44■□□□□ 0.86
PTBP1-204ENST00000394601 NEXMIFQ5QGS0 1516 aa20.43■□□□□ 0.86
PTBP1-204ENST00000394601 NEO1Q92859 1461 aa20.43■□□□□ 0.86
PTBP1-204ENST00000394601 USP32Q8NFA0 1604 aa20.43■□□□□ 0.86
PTBP1-204ENST00000394601 ARHGEF28Q8N1W1 1705 aaKnown RBP20.42■□□□□ 0.86
PTBP1-204ENST00000394601 C20orf194Q5TEA3 1177 aa20.42■□□□□ 0.86
PTBP1-204ENST00000394601 DAXXQ9UER7 740 aaPredicted RBP20.42■□□□□ 0.86
PTBP1-204ENST00000394601 GLI2P10070 1586 aa20.41■□□□□ 0.86
PTBP1-204ENST00000394601 SLC24A1O60721 1099 aa20.4■□□□□ 0.86
PTBP1-204ENST00000394601 SPINK5Q9NQ38 1064 aaPredicted RBP20.4■□□□□ 0.86
PTBP1-204ENST00000394601 CRBNQ96SW2 442 aa20.39■□□□□ 0.85
PTBP1-204ENST00000394601 SLFN5Q08AF3 891 aa20.38■□□□□ 0.85
PTBP1-204ENST00000394601 WDR43Q15061 677 aaKnown RBP eCLIP20.38■□□□□ 0.858e-6■■□□□ 11.7
PTBP1-204ENST00000394601 UBE2Q2Q8WVN8 375 aa20.38■□□□□ 0.85
PTBP1-204ENST00000394601 CENPJQ9HC77 1338 aaPredicted RBP20.38■□□□□ 0.85
PTBP1-204ENST00000394601 TULP4Q9NRJ4 1543 aa20.37■□□□□ 0.85
PTBP1-204ENST00000394601 ARHGAP31Q2M1Z3 1444 aa20.37■□□□□ 0.85
PTBP1-204ENST00000394601 RPGRIP1LQ68CZ1 1315 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms