RNA–Protein interactions for RNA: ENST00000393966.1

PLEKHG4-203, Transcript of pleckstrin homology and RhoGEF domain containing G4, humanhuman

TSL 1 (best)

Gene PLEKHG4, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHG4-203ENST00000393966 CHGAP10645 457 aaKnown RBP18.93■□□□□ 0.62
PLEKHG4-203ENST00000393966 KIAA1210Q9ULL0 1709 aa18.93■□□□□ 0.62
PLEKHG4-203ENST00000393966 DISP3Q9P2K9 1392 aa18.93■□□□□ 0.62
PLEKHG4-203ENST00000393966 NRXN1Q9ULB1 1477 aa18.93■□□□□ 0.62
PLEKHG4-203ENST00000393966 CCDC184Q52MB2 194 aa18.92■□□□□ 0.62
PLEKHG4-203ENST00000393966 AGLP35573 1532 aa18.92■□□□□ 0.62
PLEKHG4-203ENST00000393966 SCAF11Q99590 1463 aaKnown RBP18.91■□□□□ 0.62
PLEKHG4-203ENST00000393966 CFAP70Q5T0N1 1121 aa18.9■□□□□ 0.62
PLEKHG4-203ENST00000393966 PPLO60437 1756 aa18.9■□□□□ 0.62
PLEKHG4-203ENST00000393966 ARHGEF40Q8TER5 1519 aa18.89■□□□□ 0.62
PLEKHG4-203ENST00000393966 PREX1Q8TCU6 1659 aa18.88■□□□□ 0.61
PLEKHG4-203ENST00000393966 IDI1Q13907 227 aa18.86■□□□□ 0.61
PLEKHG4-203ENST00000393966 TMF1P82094 1093 aa18.85■□□□□ 0.61
PLEKHG4-203ENST00000393966 SUPT16HQ9Y5B9 1047 aaKnown RBP18.85■□□□□ 0.61
PLEKHG4-203ENST00000393966 PIK3C2GO75747 1445 aa18.85■□□□□ 0.61
PLEKHG4-203ENST00000393966 CNGB1Q14028 1251 aaPredicted RBP18.85■□□□□ 0.61
PLEKHG4-203ENST00000393966 RPGRIP1LQ68CZ1 1315 aa18.84■□□□□ 0.61
PLEKHG4-203ENST00000393966 FBXO31Q5XUX0 539 aaPredicted RBP18.83■□□□□ 0.61
PLEKHG4-203ENST00000393966 SLC52A1Q9NWF4 448 aa18.83■□□□□ 0.6
PLEKHG4-203ENST00000393966 NEXMIFQ5QGS0 1516 aa18.83■□□□□ 0.6
PLEKHG4-203ENST00000393966 ERVK-7P63135 1459 aa18.82■□□□□ 0.6
PLEKHG4-203ENST00000393966 MRS2Q9HD23 443 aa18.82■□□□□ 0.6
PLEKHG4-203ENST00000393966 PPP6R1Q9UPN7 881 aa18.82■□□□□ 0.6
PLEKHG4-203ENST00000393966 CLTCQ00610 1675 aaKnown RBP18.82■□□□□ 0.6
PLEKHG4-203ENST00000393966 EIF3AQ14152 1382 aaKnown RBP18.81■□□□□ 0.6
PLEKHG4-203ENST00000393966 MLECQ14165 292 aa18.81■□□□□ 0.6
PLEKHG4-203ENST00000393966 SETBP1Q9Y6X0 1596 aa18.8■□□□□ 0.6
PLEKHG4-203ENST00000393966 MYO5BQ9ULV0 1848 aa18.79■□□□□ 0.6
PLEKHG4-203ENST00000393966 NUTM2DQ5VT03 806 aaPredicted RBP18.79■□□□□ 0.6
PLEKHG4-203ENST00000393966 C14orf93Q9H972 538 aaKnown RBP18.79■□□□□ 0.6
PLEKHG4-203ENST00000393966 TMEM131LA2VDJ0 1609 aa18.79■□□□□ 0.6
PLEKHG4-203ENST00000393966 PER1O15534 1290 aaPredicted RBP18.79■□□□□ 0.6
PLEKHG4-203ENST00000393966 ADGRB1O14514 1584 aa18.78■□□□□ 0.6
PLEKHG4-203ENST00000393966 FAM9BQ8IZU0 186 aa18.75■□□□□ 0.59
PLEKHG4-203ENST00000393966 PANK3Q9H999 370 aa18.75■□□□□ 0.59
PLEKHG4-203ENST00000393966 VGFO15240 615 aaPredicted RBP18.75■□□□□ 0.59
PLEKHG4-203ENST00000393966 HNRNPUQ00839 825 aaKnown RBP eCLIP18.75■□□□□ 0.59
PLEKHG4-203ENST00000393966 MYO3AQ8NEV4 1616 aa18.74■□□□□ 0.59
PLEKHG4-203ENST00000393966 TMEM132EQ6IEE7 984 aa18.74■□□□□ 0.59
PLEKHG4-203ENST00000393966 SPATA31D1Q6ZQQ2 1576 aa18.74■□□□□ 0.59
PLEKHG4-203ENST00000393966 ZFYVE9O95405 1425 aa18.73■□□□□ 0.59
PLEKHG4-203ENST00000393966 KTN1Q86UP2 1357 aaKnown RBP18.72■□□□□ 0.59
PLEKHG4-203ENST00000393966 PARD3Q8TEW0 1356 aa18.72■□□□□ 0.59
PLEKHG4-203ENST00000393966 RALBP1Q15311 655 aa18.71■□□□□ 0.59
PLEKHG4-203ENST00000393966 CDCA8Q53HL2 280 aa18.71■□□□□ 0.59
PLEKHG4-203ENST00000393966 TRAK1Q9UPV9 953 aa18.71■□□□□ 0.59
PLEKHG4-203ENST00000393966 MYOM1P52179 1685 aa18.71■□□□□ 0.58
PLEKHG4-203ENST00000393966 MYBBP1AQ9BQG0 1328 aaKnown RBP18.7■□□□□ 0.58
PLEKHG4-203ENST00000393966 SBNO2Q9Y2G9 1366 aa18.7■□□□□ 0.58
PLEKHG4-203ENST00000393966 CENPJQ9HC77 1338 aaPredicted RBP18.69■□□□□ 0.58
PLEKHG4-203ENST00000393966 KDM5AP29375 1690 aaKnown RBP18.69■□□□□ 0.58
PLEKHG4-203ENST00000393966 ZMYM3Q14202 1370 aa18.68■□□□□ 0.58
PLEKHG4-203ENST00000393966 SENP3Q9H4L4 574 aaPredicted RBP18.67■□□□□ 0.58
PLEKHG4-203ENST00000393966 ASXL1Q8IXJ9 1541 aa18.67■□□□□ 0.58
PLEKHG4-203ENST00000393966 A2ML1A8K2U0 1454 aa18.66■□□□□ 0.58
PLEKHG4-203ENST00000393966 CC2D1BQ5T0F9 858 aaKnown RBP18.66■□□□□ 0.58
PLEKHG4-203ENST00000393966 QRICH2Q9H0J4 1663 aa18.66■□□□□ 0.58
PLEKHG4-203ENST00000393966 BRD4O60885 1362 aaPredicted RBP18.66■□□□□ 0.58
PLEKHG4-203ENST00000393966 ESF1Q9H501 851 aaKnown RBP18.65■□□□□ 0.58
PLEKHG4-203ENST00000393966 SLC24A1O60721 1099 aa18.65■□□□□ 0.58
PLEKHG4-203ENST00000393966 TMC1Q8TDI8 760 aa18.65■□□□□ 0.58
PLEKHG4-203ENST00000393966 PNISRQ8TF01 805 aaKnown RBP18.65■□□□□ 0.58
PLEKHG4-203ENST00000393966 STAG3Q9UJ98 1225 aa18.65■□□□□ 0.58
PLEKHG4-203ENST00000393966 TRHP20396 242 aaPredicted RBP18.64■□□□□ 0.57
PLEKHG4-203ENST00000393966 ARHGEF28Q8N1W1 1705 aaKnown RBP18.64■□□□□ 0.57
PLEKHG4-203ENST00000393966 NLRP13Q86W25 1043 aa18.62■□□□□ 0.57
PLEKHG4-203ENST00000393966 AMER1Q5JTC6 1135 aaPredicted RBP18.61■□□□□ 0.57
PLEKHG4-203ENST00000393966 KNSTRNQ9Y448 316 aa18.6■□□□□ 0.57
PLEKHG4-203ENST00000393966 RIMS2Q9UQ26 1411 aa18.59■□□□□ 0.57
PLEKHG4-203ENST00000393966 ALKQ9UM73 1620 aa18.59■□□□□ 0.57
PLEKHG4-203ENST00000393966 ZBED9Q6R2W3 1325 aa18.59■□□□□ 0.57
PLEKHG4-203ENST00000393966 LRPPRCP42704 1394 aaKnown RBP18.58■□□□□ 0.56
PLEKHG4-203ENST00000393966 TNRQ92752 1358 aa18.57■□□□□ 0.56
PLEKHG4-203ENST00000393966 STK26Q9P289 416 aa18.57■□□□□ 0.56
PLEKHG4-203ENST00000393966 TULP4Q9NRJ4 1543 aa18.56■□□□□ 0.56
PLEKHG4-203ENST00000393966 YTHDC2Q9H6S0 1430 aaKnown RBP18.56■□□□□ 0.56
PLEKHG4-203ENST00000393966 CARD14Q9BXL6 1004 aa18.55■□□□□ 0.56
PLEKHG4-203ENST00000393966 PTPRMP28827 1452 aa18.55■□□□□ 0.56
PLEKHG4-203ENST00000393966 SAFB2Q14151 953 aaKnown RBP eCLIP18.54■□□□□ 0.56
PLEKHG4-203ENST00000393966 FKBP8Q14318 412 aa18.54■□□□□ 0.56
PLEKHG4-203ENST00000393966 NPC1L1Q9UHC9 1359 aa18.54■□□□□ 0.56
PLEKHG4-203ENST00000393966 SETD1AO15047 1707 aaKnown RBP18.53■□□□□ 0.56
PLEKHG4-203ENST00000393966 EVC2Q86UK5 1308 aa18.51■□□□□ 0.55
PLEKHG4-203ENST00000393966 CEBPAP49715 358 aaPredicted RBP18.51■□□□□ 0.55
PLEKHG4-203ENST00000393966 SLC12A5Q9H2X9 1139 aa18.51■□□□□ 0.55
PLEKHG4-203ENST00000393966 NRXN3Q9Y4C0 1643 aa18.51■□□□□ 0.55
PLEKHG4-203ENST00000393966 SENP3-EIF4A1A0A087X0R7 540 aa18.5■□□□□ 0.55
PLEKHG4-203ENST00000393966 PPP2R1AP30153 589 aa18.5■□□□□ 0.55
PLEKHG4-203ENST00000393966 PRAM1Q96QH2 718 aa18.5■□□□□ 0.55
PLEKHG4-203ENST00000393966 UBR1Q8IWV7 1749 aa18.5■□□□□ 0.55
PLEKHG4-203ENST00000393966 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.48■□□□□ 0.55
PLEKHG4-203ENST00000393966 PUS7Q96PZ0 661 aaKnown RBP18.48■□□□□ 0.55
PLEKHG4-203ENST00000393966 CABP2Q9NPB3 220 aa18.48■□□□□ 0.55
PLEKHG4-203ENST00000393966 TSHZ2Q9NRE2 1034 aa18.48■□□□□ 0.55
PLEKHG4-203ENST00000393966 C3P01024 1663 aa18.47■□□□□ 0.55
PLEKHG4-203ENST00000393966 NSD3Q9BZ95 1437 aa18.47■□□□□ 0.55
PLEKHG4-203ENST00000393966 NEFLP07196 543 aa18.47■□□□□ 0.55
PLEKHG4-203ENST00000393966 MINK1Q8N4C8 1332 aaPredicted RBP18.46■□□□□ 0.55
PLEKHG4-203ENST00000393966 FER1L4A9Z1Z3 1794 aa18.46■□□□□ 0.55
PLEKHG4-203ENST00000393966 TMEM2Q9UHN6 1383 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms