RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 CLTCL1P53675 1640 aa34.66■■■■□ 3.14
HMGA2-202ENST00000393577 HDGFP51858 240 aaKnown RBP34.66■■■■□ 3.14
HMGA2-202ENST00000393577 UBAP1LF5GYI3 381 aa34.65■■■■□ 3.14
HMGA2-202ENST00000393577 BCANQ96GW7 911 aa34.65■■■■□ 3.14
HMGA2-202ENST00000393577 SLC26A8Q96RN1 970 aa34.65■■■■□ 3.14
HMGA2-202ENST00000393577 SENP3Q9H4L4 574 aaPredicted RBP34.65■■■■□ 3.14
HMGA2-202ENST00000393577 PLEKHG1Q9ULL1 1385 aa34.63■■■■□ 3.13
HMGA2-202ENST00000393577 LRRC7Q96NW7 1537 aa34.63■■■■□ 3.13
HMGA2-202ENST00000393577 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.62■■■■□ 3.13
HMGA2-202ENST00000393577 NUTM2DQ5VT03 806 aaPredicted RBP34.61■■■■□ 3.13
HMGA2-202ENST00000393577 SETD5Q9C0A6 1442 aa34.58■■■■□ 3.13
HMGA2-202ENST00000393577 KIF1BO60333 1816 aa34.57■■■■□ 3.12
HMGA2-202ENST00000393577 ZNF326Q5BKZ1 582 aaKnown RBP34.53■■■■□ 3.12
HMGA2-202ENST00000393577 KCNA6P17658 529 aa34.52■■■■□ 3.12
HMGA2-202ENST00000393577 NWD1Q149M9 1564 aa34.51■■■■□ 3.12
HMGA2-202ENST00000393577 FOXD1Q16676 465 aa34.51■■■■□ 3.12
HMGA2-202ENST00000393577 XIRP1Q702N8 1843 aaKnown RBP34.51■■■■□ 3.11
HMGA2-202ENST00000393577 MPHOSPH9Q99550 1183 aa34.5■■■■□ 3.11
HMGA2-202ENST00000393577 TOM1O60784 492 aa34.49■■■■□ 3.11
HMGA2-202ENST00000393577 ADAMTS13Q76LX8 1427 aa34.48■■■■□ 3.11
HMGA2-202ENST00000393577 RAB3GAP2Q9H2M9 1393 aa34.48■■■■□ 3.11
HMGA2-202ENST00000393577 DIP2AQ14689 1571 aa34.47■■■■□ 3.11
HMGA2-202ENST00000393577 CHD2O14647 1828 aaKnown RBP34.46■■■■□ 3.11
HMGA2-202ENST00000393577 NEXMIFQ5QGS0 1516 aa34.45■■■■□ 3.11
HMGA2-202ENST00000393577 ALKQ9UM73 1620 aa34.45■■■■□ 3.11
HMGA2-202ENST00000393577 TBX22Q9Y458 520 aa34.45■■■■□ 3.11
HMGA2-202ENST00000393577 ACIN1Q9UKV3 1341 aaKnown RBP34.45■■■■□ 3.11
HMGA2-202ENST00000393577 SCAF1Q9H7N4 1312 aaKnown RBP34.44■■■■□ 3.1
HMGA2-202ENST00000393577 NKTRP30414 1462 aaKnown RBP34.44■■■■□ 3.1
HMGA2-202ENST00000393577 PIP4K2BP78356 416 aa34.43■■■■□ 3.1
HMGA2-202ENST00000393577 TMEM94Q12767 1356 aa34.41■■■■□ 3.1
HMGA2-202ENST00000393577 NRXN3Q9Y4C0 1643 aa34.41■■■■□ 3.1
HMGA2-202ENST00000393577 PROSER2Q86WR7 435 aaPredicted RBP34.39■■■■□ 3.1
HMGA2-202ENST00000393577 SETBP1Q9Y6X0 1596 aa34.39■■■■□ 3.1
HMGA2-202ENST00000393577 CCDC144AA2RUR9 1427 aa34.38■■■■□ 3.09
HMGA2-202ENST00000393577 RBM33Q96EV2 1170 aaKnown RBP34.36■■■■□ 3.09
HMGA2-202ENST00000393577 PIK3R4Q99570 1358 aa34.35■■■■□ 3.09
HMGA2-202ENST00000393577 PPLO60437 1756 aa34.31■■■■□ 3.08
HMGA2-202ENST00000393577 RPGRIP1LQ68CZ1 1315 aa34.29■■■■□ 3.08
HMGA2-202ENST00000393577 PTPRUQ92729 1446 aa34.28■■■■□ 3.08
HMGA2-202ENST00000393577 VGFO15240 615 aaPredicted RBP34.25■■■■□ 3.07
HMGA2-202ENST00000393577 HSPA1LP34931 641 aa34.24■■■■□ 3.07
HMGA2-202ENST00000393577 AMOTL2Q9Y2J4 779 aa34.24■■■■□ 3.07
HMGA2-202ENST00000393577 SPATA31E1Q6ZUB1 1445 aa34.23■■■■□ 3.07
HMGA2-202ENST00000393577 METP08581 1390 aa34.23■■■■□ 3.07
HMGA2-202ENST00000393577 XRN1Q8IZH2 1706 aaKnown RBP34.22■■■■□ 3.07
HMGA2-202ENST00000393577 MSH6P52701 1360 aa34.22■■■■□ 3.07
HMGA2-202ENST00000393577 RGL3Q3MIN7 710 aa34.21■■■■□ 3.07
HMGA2-202ENST00000393577 HRCP23327 699 aa34.2■■■■□ 3.07
HMGA2-202ENST00000393577 SETD1AO15047 1707 aaKnown RBP34.18■■■■□ 3.06
HMGA2-202ENST00000393577 IFT172Q9UG01 1749 aa34.18■■■■□ 3.06
HMGA2-202ENST00000393577 NCOA3Q9Y6Q9 1424 aa34.17■■■■□ 3.06
HMGA2-202ENST00000393577 C14orf37Q86TY3 774 aa34.15■■■■□ 3.06
HMGA2-202ENST00000393577 ANKRD30BQ9BXX2 1392 aa34.11■■■■□ 3.05
HMGA2-202ENST00000393577 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.1■■■■□ 3.05
HMGA2-202ENST00000393577 ADGRF5Q8IZF2 1346 aa34.1■■■■□ 3.05
HMGA2-202ENST00000393577 FAM135BQ49AJ0 1406 aa34.09■■■■□ 3.05
HMGA2-202ENST00000393577 ROBO1Q9Y6N7 1651 aa34.09■■■■□ 3.05
HMGA2-202ENST00000393577 C19orf44Q9H6X5 657 aa34.04■■■■□ 3.04
HMGA2-202ENST00000393577 SLAIN2Q9P270 581 aa34.03■■■■□ 3.04
HMGA2-202ENST00000393577 DISP3Q9P2K9 1392 aa34.01■■■■□ 3.04
HMGA2-202ENST00000393577 ATF3P18847 181 aa34■■■■□ 3.03
HMGA2-202ENST00000393577 CADPS2Q86UW7 1296 aa34■■■■□ 3.03
HMGA2-202ENST00000393577 PIK3C2GO75747 1445 aa33.99■■■■□ 3.03
HMGA2-202ENST00000393577 PTCH1Q13635 1447 aa33.99■■■■□ 3.03
HMGA2-202ENST00000393577 NALCNQ8IZF0 1738 aa33.97■■■■□ 3.03
HMGA2-202ENST00000393577 DCCP43146 1447 aa33.96■■■■□ 3.03
HMGA2-202ENST00000393577 MYOM2P54296 1465 aa33.96■■■■□ 3.03
HMGA2-202ENST00000393577 ROBO2Q9HCK4 1378 aa33.96■■■■□ 3.03
HMGA2-202ENST00000393577 PRAG1Q86YV5 1406 aa33.96■■■■□ 3.03
HMGA2-202ENST00000393577 ADGRL3Q9HAR2 1447 aa33.95■■■■□ 3.02
HMGA2-202ENST00000393577 NRXN1Q9ULB1 1477 aa33.92■■■■□ 3.02
HMGA2-202ENST00000393577 ASXL1Q8IXJ9 1541 aa33.92■■■■□ 3.02
HMGA2-202ENST00000393577 MED1Q15648 1581 aaPredicted RBP33.91■■■■□ 3.02
HMGA2-202ENST00000393577 PHLPP1O60346 1717 aa33.89■■■■□ 3.02
HMGA2-202ENST00000393577 LAMC1P11047 1609 aa33.86■■■■□ 3.01
HMGA2-202ENST00000393577 TMEM132EQ6IEE7 984 aa33.86■■■■□ 3.01
HMGA2-202ENST00000393577 MST1RQ04912 1400 aa33.86■■■■□ 3.01
HMGA2-202ENST00000393577 KNDC1Q76NI1 1749 aa33.85■■■■□ 3.01
HMGA2-202ENST00000393577 STK26Q9P289 416 aa33.85■■■■□ 3.01
HMGA2-202ENST00000393577 LRPPRCP42704 1394 aaKnown RBP33.85■■■■□ 3.01
HMGA2-202ENST00000393577 C14orf93Q9H972 538 aaKnown RBP33.83■■■■□ 3.01
HMGA2-202ENST00000393577 TECPR2O15040 1411 aa33.82■■■■□ 3
HMGA2-202ENST00000393577 CFAP70Q5T0N1 1121 aa33.82■■■■□ 3
HMGA2-202ENST00000393577 YTHDC2Q9H6S0 1430 aaKnown RBP33.8■■■■□ 3
HMGA2-202ENST00000393577 DCAF11Q8TEB1 546 aa33.8■■■■□ 3
HMGA2-202ENST00000393577 KDM2AQ9Y2K7 1162 aa33.8■■■■□ 3
HMGA2-202ENST00000393577 BRINP3Q76B58 766 aa33.79■■■■□ 3
HMGA2-202ENST00000393577 ABCC11Q96J66 1382 aa33.79■■■■□ 3
HMGA2-202ENST00000393577 COL16A1Q07092 1604 aaPredicted RBP33.79■■■■□ 3
HMGA2-202ENST00000393577 AHDC1Q5TGY3 1603 aaPredicted RBP33.79■■■■□ 3
HMGA2-202ENST00000393577 DHX57Q6P158 1386 aaKnown RBP33.76■■■■□ 3
HMGA2-202ENST00000393577 WAPLQ7Z5K2 1190 aa33.74■■■□□ 2.99
HMGA2-202ENST00000393577 PLEKHH1Q9ULM0 1364 aa33.72■■■□□ 2.99
HMGA2-202ENST00000393577 C1orf167Q5SNV9 1468 aa33.72■■■□□ 2.99
HMGA2-202ENST00000393577 CDC42BPGQ6DT37 1551 aa33.71■■■□□ 2.99
HMGA2-202ENST00000393577 STAC3Q96MF2 364 aa33.7■■■□□ 2.99
HMGA2-202ENST00000393577 NHSL1Q5SYE7 1610 aa33.69■■■□□ 2.98
HMGA2-202ENST00000393577 ILDR2Q71H61 639 aa33.69■■■□□ 2.98
HMGA2-202ENST00000393577 JCADQ9P266 1359 aa33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms