RNA–Protein interactions for RNA: ENST00000393417.7

MDM2-213, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5

Gene MDM2, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-213ENST00000393417 SLC26A8Q96RN1 970 aa11.79□□□□□ -0.52
MDM2-213ENST00000393417 ANKRD50Q9ULJ7 1429 aa11.78□□□□□ -0.52
MDM2-213ENST00000393417 TMEM94Q12767 1356 aa11.77□□□□□ -0.53
MDM2-213ENST00000393417 IQGAP3Q86VI3 1631 aa11.77□□□□□ -0.53
MDM2-213ENST00000393417 PHLPP1O60346 1717 aa11.76□□□□□ -0.53
MDM2-213ENST00000393417 PPARGC1BQ86YN6 1023 aaKnown RBP11.75□□□□□ -0.53
MDM2-213ENST00000393417 ZFYVE9O95405 1425 aa11.75□□□□□ -0.53
MDM2-213ENST00000393417 BCANQ96GW7 911 aa11.75□□□□□ -0.53
MDM2-213ENST00000393417 RPRD2Q5VT52 1461 aaKnown RBP11.75□□□□□ -0.53
MDM2-213ENST00000393417 SPHKAPQ2M3C7 1700 aa11.74□□□□□ -0.53
MDM2-213ENST00000393417 NKTRP30414 1462 aaKnown RBP11.73□□□□□ -0.53
MDM2-213ENST00000393417 SETD1AO15047 1707 aaKnown RBP11.73□□□□□ -0.53
MDM2-213ENST00000393417 ITGAEP38570 1179 aa11.73□□□□□ -0.53
MDM2-213ENST00000393417 NUTM2DQ5VT03 806 aaPredicted RBP11.73□□□□□ -0.53
MDM2-213ENST00000393417 RIMS2Q9UQ26 1411 aa11.73□□□□□ -0.53
MDM2-213ENST00000393417 PROSER2Q86WR7 435 aaPredicted RBP11.72□□□□□ -0.53
MDM2-213ENST00000393417 CHGAP10645 457 aaKnown RBP11.71□□□□□ -0.53
MDM2-213ENST00000393417 KCNA6P17658 529 aa11.71□□□□□ -0.53
MDM2-213ENST00000393417 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.71□□□□□ -0.54
MDM2-213ENST00000393417 PPP1R15AO75807 674 aaPredicted RBP11.7□□□□□ -0.54
MDM2-213ENST00000393417 SLC52A1Q9NWF4 448 aa11.7□□□□□ -0.54
MDM2-213ENST00000393417 PLEKHG1Q9ULL1 1385 aa11.7□□□□□ -0.54
MDM2-213ENST00000393417 FAM135BQ49AJ0 1406 aa11.69□□□□□ -0.54
MDM2-213ENST00000393417 RGS17Q9UGC6 210 aaPredicted RBP11.69□□□□□ -0.54
MDM2-213ENST00000393417 NRXN3Q9Y4C0 1643 aa11.69□□□□□ -0.54
MDM2-213ENST00000393417 COL16A1Q07092 1604 aaPredicted RBP11.68□□□□□ -0.54
MDM2-213ENST00000393417 MSH6P52701 1360 aa11.67□□□□□ -0.54
MDM2-213ENST00000393417 ROCK1Q13464 1354 aa11.67□□□□□ -0.54
MDM2-213ENST00000393417 ADAMTS13Q76LX8 1427 aa11.67□□□□□ -0.54
MDM2-213ENST00000393417 DIP2AQ14689 1571 aa11.66□□□□□ -0.54
MDM2-213ENST00000393417 CLTCL1P53675 1640 aa11.66□□□□□ -0.54
MDM2-213ENST00000393417 KIF1BO60333 1816 aa11.66□□□□□ -0.54
MDM2-213ENST00000393417 NUP155O75694 1391 aa11.65□□□□□ -0.54
MDM2-213ENST00000393417 XRN1Q8IZH2 1706 aaKnown RBP11.65□□□□□ -0.54
MDM2-213ENST00000393417 TRPM2O94759 1503 aa11.65□□□□□ -0.55
MDM2-213ENST00000393417 PTPRUQ92729 1446 aa11.64□□□□□ -0.55
MDM2-213ENST00000393417 POTEAQ6S8J7 498 aa11.63□□□□□ -0.55
MDM2-213ENST00000393417 C14orf37Q86TY3 774 aa11.63□□□□□ -0.55
MDM2-213ENST00000393417 NALCNQ8IZF0 1738 aa11.63□□□□□ -0.55
MDM2-213ENST00000393417 SLAIN2Q9P270 581 aa11.62□□□□□ -0.55
MDM2-213ENST00000393417 SHPRHQ149N8 1683 aa11.62□□□□□ -0.55
MDM2-213ENST00000393417 LRP6O75581 1613 aa11.62□□□□□ -0.55
MDM2-213ENST00000393417 SETBP1Q9Y6X0 1596 aa11.61□□□□□ -0.55
MDM2-213ENST00000393417 AHDC1Q5TGY3 1603 aaPredicted RBP11.6□□□□□ -0.55
MDM2-213ENST00000393417 NEXMIFQ5QGS0 1516 aa11.6□□□□□ -0.55
MDM2-213ENST00000393417 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.6□□□□□ -0.55
MDM2-213ENST00000393417 TBX22Q9Y458 520 aa11.6□□□□□ -0.55
MDM2-213ENST00000393417 NHSL1Q5SYE7 1610 aa11.59□□□□□ -0.55
MDM2-213ENST00000393417 HDGFP51858 240 aaKnown RBP11.59□□□□□ -0.55
MDM2-213ENST00000393417 JCADQ9P266 1359 aa11.58□□□□□ -0.56
MDM2-213ENST00000393417 ZNF326Q5BKZ1 582 aaKnown RBP11.58□□□□□ -0.56
MDM2-213ENST00000393417 AMOTL2Q9Y2J4 779 aa11.58□□□□□ -0.56
MDM2-213ENST00000393417 ASXL1Q8IXJ9 1541 aa11.57□□□□□ -0.56
MDM2-213ENST00000393417 PPLO60437 1756 aa11.57□□□□□ -0.56
MDM2-213ENST00000393417 RRBP1Q9P2E9 1410 aaKnown RBP11.56□□□□□ -0.56
MDM2-213ENST00000393417 METP08581 1390 aa11.56□□□□□ -0.56
MDM2-213ENST00000393417 ATF3P18847 181 aa11.55□□□□□ -0.56
MDM2-213ENST00000393417 PIK3R4Q99570 1358 aa11.55□□□□□ -0.56
MDM2-213ENST00000393417 NAIPQ13075 1403 aa11.55□□□□□ -0.56
MDM2-213ENST00000393417 NCOA3Q9Y6Q9 1424 aa11.55□□□□□ -0.56
MDM2-213ENST00000393417 BRINP3Q76B58 766 aa11.54□□□□□ -0.56
MDM2-213ENST00000393417 C19orf44Q9H6X5 657 aa11.54□□□□□ -0.56
MDM2-213ENST00000393417 MST1RQ04912 1400 aa11.54□□□□□ -0.56
MDM2-213ENST00000393417 MEX3CQ5U5Q3 659 aaKnown RBP11.53□□□□□ -0.56
MDM2-213ENST00000393417 CADPS2Q86UW7 1296 aa11.53□□□□□ -0.56
MDM2-213ENST00000393417 DDX17Q92841 729 aaKnown RBP11.53□□□□□ -0.56
MDM2-213ENST00000393417 NUTM2BA6NNL0 878 aaPredicted RBP11.52□□□□□ -0.57
MDM2-213ENST00000393417 NUTM2EB1AL46 878 aaPredicted RBP11.52□□□□□ -0.57
MDM2-213ENST00000393417 NUTM2AQ8IVF1 878 aaPredicted RBP11.52□□□□□ -0.57
MDM2-213ENST00000393417 DCCP43146 1447 aa11.51□□□□□ -0.57
MDM2-213ENST00000393417 ADGRL3Q9HAR2 1447 aa11.5□□□□□ -0.57
MDM2-213ENST00000393417 TRIM52Q96A61 297 aa11.5□□□□□ -0.57
MDM2-213ENST00000393417 IFT172Q9UG01 1749 aa11.5□□□□□ -0.57
MDM2-213ENST00000393417 SPATA31A6Q5VVP1 1343 aa11.49□□□□□ -0.57
MDM2-213ENST00000393417 HFM1A2PYH4 1435 aa11.48□□□□□ -0.57
MDM2-213ENST00000393417 ROBO2Q9HCK4 1378 aa11.47□□□□□ -0.57
MDM2-213ENST00000393417 LAMC1P11047 1609 aa11.47□□□□□ -0.57
MDM2-213ENST00000393417 SETD5Q9C0A6 1442 aa11.46□□□□□ -0.57
MDM2-213ENST00000393417 C1orf167Q5SNV9 1468 aa11.46□□□□□ -0.58
MDM2-213ENST00000393417 RGPD8O14715 1765 aaPredicted RBP11.45□□□□□ -0.58
MDM2-213ENST00000393417 MARF1Q9Y4F3 1742 aaKnown RBP11.45□□□□□ -0.58
MDM2-213ENST00000393417 PTCH1Q13635 1447 aa11.45□□□□□ -0.58
MDM2-213ENST00000393417 PNPLA6Q8IY17 1366 aa11.45□□□□□ -0.58
MDM2-213ENST00000393417 AFF2P51816 1311 aa11.45□□□□□ -0.58
MDM2-213ENST00000393417 EP400Q96L91 3159 aa11.44□□□□□ -0.58
MDM2-213ENST00000393417 ZNF772Q68DY9 489 aaPredicted RBP11.44□□□□□ -0.58
MDM2-213ENST00000393417 SLC4A1APQ9BWU0 796 aaKnown RBP11.44□□□□□ -0.58
MDM2-213ENST00000393417 C8orf37Q96NL8 207 aa11.43□□□□□ -0.58
MDM2-213ENST00000393417 KNDC1Q76NI1 1749 aa11.43□□□□□ -0.58
MDM2-213ENST00000393417 ORAI2Q96SN7 254 aa11.43□□□□□ -0.58
MDM2-213ENST00000393417 RGS12O14924 1447 aa11.41□□□□□ -0.58
MDM2-213ENST00000393417 COL22A1Q8NFW1 1626 aaPredicted RBP11.41□□□□□ -0.58
MDM2-213ENST00000393417 CDC42BPGQ6DT37 1551 aa11.41□□□□□ -0.58
MDM2-213ENST00000393417 ADAMTS2O95450 1211 aa11.41□□□□□ -0.58
MDM2-213ENST00000393417 FMN2Q9NZ56 1722 aa11.4□□□□□ -0.58
MDM2-213ENST00000393417 RXRBP28702 533 aa11.4□□□□□ -0.58
MDM2-213ENST00000393417 UPF1Q92900 1129 aaKnown RBP eCLIP11.4□□□□□ -0.58
MDM2-213ENST00000393417 LRRC59Q96AG4 307 aaKnown RBP11.4□□□□□ -0.58
MDM2-213ENST00000393417 ADGRF5Q8IZF2 1346 aa11.4□□□□□ -0.58
MDM2-213ENST00000393417 SRCAPQ6ZRS2 3230 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms