RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 MTERF4Q7Z6M4 381 aaKnown RBP3.98□□□□□ -1.77
PHF3-202ENST00000393387 DZIP1Q86YF9 867 aaKnown RBP3.98□□□□□ -1.77
PHF3-202ENST00000393387 RBM33Q96EV2 1170 aaKnown RBP3.98□□□□□ -1.77
PHF3-202ENST00000393387 DIAPH3Q9NSV4 1193 aa3.98□□□□□ -1.77
PHF3-202ENST00000393387 CFAP45Q9UL16 551 aa3.98□□□□□ -1.77
PHF3-202ENST00000393387 MPHOSPH10O00566 681 aaKnown RBP3.98□□□□□ -1.77
PHF3-202ENST00000393387 SOX12O15370 315 aa3.98□□□□□ -1.77
PHF3-202ENST00000393387 EIF4G2P78344 907 aaKnown RBP eCLIP3.98□□□□□ -1.77
PHF3-202ENST00000393387 ODF2Q5BJF6 829 aa3.98□□□□□ -1.77
PHF3-202ENST00000393387 CCDC34Q96HJ3 373 aa3.98□□□□□ -1.77
PHF3-202ENST00000393387 RBM28Q9NW13 759 aaKnown RBP3.97□□□□□ -1.77
PHF3-202ENST00000393387 ZBTB12Q9Y330 459 aaPredicted RBP3.97□□□□□ -1.77
PHF3-202ENST00000393387 GOLGA6L7A0A1B0GV03 622 aa3.97□□□□□ -1.77
PHF3-202ENST00000393387 CCDC160A6NGH7 325 aa3.97□□□□□ -1.77
PHF3-202ENST00000393387 PDE4AP27815 886 aa3.97□□□□□ -1.77
PHF3-202ENST00000393387 FBLN2P98095 1184 aa3.97□□□□□ -1.77
PHF3-202ENST00000393387 BICD2Q8TD16 824 aa3.97□□□□□ -1.77
PHF3-202ENST00000393387 SMC2O95347 1197 aa3.97□□□□□ -1.77
PHF3-202ENST00000393387 GBP2P32456 591 aaPredicted RBP3.97□□□□□ -1.77
PHF3-202ENST00000393387 CCDC146Q8IYE0 955 aa3.97□□□□□ -1.77
PHF3-202ENST00000393387 ERCC4Q92889 916 aaPredicted RBP3.97□□□□□ -1.77
PHF3-202ENST00000393387 CLUAP1Q96AJ1 413 aa3.97□□□□□ -1.77
PHF3-202ENST00000393387 FAM184BQ9ULE4 1060 aa3.97□□□□□ -1.77
PHF3-202ENST00000393387 TMCO5BA8MYB1 307 aa3.96□□□□□ -1.77
PHF3-202ENST00000393387 IGSF3O75054 1194 aa3.96□□□□□ -1.77
PHF3-202ENST00000393387 IPO7O95373 1038 aaKnown RBP3.96□□□□□ -1.77
PHF3-202ENST00000393387 SKOR2Q2VWA4 1001 aaPredicted RBP3.96□□□□□ -1.77
PHF3-202ENST00000393387 PDCL2Q8N4E4 241 aa3.96□□□□□ -1.77
PHF3-202ENST00000393387 C11orf95C9JLR9 678 aaPredicted RBP3.96□□□□□ -1.78
PHF3-202ENST00000393387 MNAT1P51948 309 aa3.96□□□□□ -1.78
PHF3-202ENST00000393387 ZNF330Q9Y3S2 320 aaPredicted RBP3.96□□□□□ -1.78
PHF3-202ENST00000393387 BRPF1P55201 1214 aaPredicted RBP3.96□□□□□ -1.78
PHF3-202ENST00000393387 SOGA3Q5TF21 947 aa3.96□□□□□ -1.78
PHF3-202ENST00000393387 DNAI2Q9GZS0 605 aa3.96□□□□□ -1.78
PHF3-202ENST00000393387 MYO6Q9UM54 1294 aa3.96□□□□□ -1.78
PHF3-202ENST00000393387 SARNPP82979 210 aaKnown RBP3.96□□□□□ -1.78
PHF3-202ENST00000393387 PPP4R3BQ5MIZ7 849 aa3.96□□□□□ -1.78
PHF3-202ENST00000393387 CNKSR2Q8WXI2 1034 aa3.96□□□□□ -1.78
PHF3-202ENST00000393387 CCP110O43303 1012 aa3.96□□□□□ -1.78
PHF3-202ENST00000393387 RGL3Q3MIN7 710 aa3.96□□□□□ -1.78
PHF3-202ENST00000393387 MICALCLQ6ZW33 695 aa3.96□□□□□ -1.78
PHF3-202ENST00000393387 KNSTRNQ9Y448 316 aa3.96□□□□□ -1.78
PHF3-202ENST00000393387 HMGB1P09429 215 aaKnown RBP3.95□□□□□ -1.78
PHF3-202ENST00000393387 SEPT7Q16181 437 aaKnown RBP3.95□□□□□ -1.78
PHF3-202ENST00000393387 MRVI1Q9Y6F6 885 aa3.95□□□□□ -1.78
PHF3-202ENST00000393387 RAD21O60216 631 aa3.95□□□□□ -1.78
PHF3-202ENST00000393387 PLIN1O60240 522 aa3.95□□□□□ -1.78
PHF3-202ENST00000393387 CCDC27Q2M243 656 aa3.95□□□□□ -1.78
PHF3-202ENST00000393387 SASS6Q6UVJ0 657 aa3.95□□□□□ -1.78
PHF3-202ENST00000393387 FAM184AQ8NB25 1140 aa3.95□□□□□ -1.78
PHF3-202ENST00000393387 CPSF2Q9P2I0 782 aaKnown RBP3.95□□□□□ -1.78
PHF3-202ENST00000393387 ST18O60284 1047 aa3.95□□□□□ -1.78
PHF3-202ENST00000393387 PDE1CQ14123 709 aaPredicted RBP3.95□□□□□ -1.78
PHF3-202ENST00000393387 CAVIN1Q6NZI2 390 aaKnown RBP3.95□□□□□ -1.78
PHF3-202ENST00000393387 PMFBP1Q8TBY8 1022 aa3.95□□□□□ -1.78
PHF3-202ENST00000393387 RILPL2Q969X0 211 aa3.95□□□□□ -1.78
PHF3-202ENST00000393387 FANCIQ9NVI1 1328 aa3.95□□□□□ -1.78
PHF3-202ENST00000393387 KIF4AO95239 1232 aa3.95□□□□□ -1.78
PHF3-202ENST00000393387 HMGN5P82970 282 aaKnown RBP3.95□□□□□ -1.78
PHF3-202ENST00000393387 SIN3AQ96ST3 1273 aa3.95□□□□□ -1.78
PHF3-202ENST00000393387 LRRCC1Q9C099 1032 aa3.95□□□□□ -1.78
PHF3-202ENST00000393387 CCDC113Q9H0I3 377 aa3.95□□□□□ -1.78
PHF3-202ENST00000393387 FRAT2O75474 233 aaPredicted RBP3.95□□□□□ -1.78
PHF3-202ENST00000393387 SEPT11Q9NVA2 429 aaKnown RBP3.95□□□□□ -1.78
PHF3-202ENST00000393387 RCAN3Q9UKA8 241 aa3.95□□□□□ -1.78
PHF3-202ENST00000393387 MSH5O43196 834 aa3.94□□□□□ -1.78
PHF3-202ENST00000393387 LMOD2Q6P5Q4 547 aa3.94□□□□□ -1.78
PHF3-202ENST00000393387 FMNL2Q96PY5 1086 aa3.94□□□□□ -1.78
PHF3-202ENST00000393387 VPS37CA5D8V6 355 aaPredicted RBP3.94□□□□□ -1.78
PHF3-202ENST00000393387 SEPT6Q14141 434 aa3.94□□□□□ -1.78
PHF3-202ENST00000393387 TMCO3Q6UWJ1 677 aa3.94□□□□□ -1.78
PHF3-202ENST00000393387 FAM114A1Q8IWE2 563 aa3.94□□□□□ -1.78
PHF3-202ENST00000393387 DNAAF4Q8WXU2 420 aa3.94□□□□□ -1.78
PHF3-202ENST00000393387 DRC1Q96MC2 740 aa3.94□□□□□ -1.78
PHF3-202ENST00000393387 TRIM5Q9C035 493 aa3.94□□□□□ -1.78
PHF3-202ENST00000393387 RWDD1Q9H446 243 aaPredicted RBP3.94□□□□□ -1.78
PHF3-202ENST00000393387 MAP2K1Q02750 393 aaPredicted RBP3.94□□□□□ -1.78
PHF3-202ENST00000393387 DIXDC1Q155Q3 683 aa3.94□□□□□ -1.78
PHF3-202ENST00000393387 SHTN1A0MZ66 631 aa3.94□□□□□ -1.78
PHF3-202ENST00000393387 MRE11P49959 708 aa3.94□□□□□ -1.78
PHF3-202ENST00000393387 UBE4AQ14139 1066 aa3.94□□□□□ -1.78
PHF3-202ENST00000393387 NAA25Q14CX7 972 aa3.94□□□□□ -1.78
PHF3-202ENST00000393387 CCDC112Q8NEF3 446 aa3.94□□□□□ -1.78
PHF3-202ENST00000393387 ESF1Q9H501 851 aaKnown RBP3.94□□□□□ -1.78
PHF3-202ENST00000393387 WDR66Q8TBY9 1149 aa3.94□□□□□ -1.78
PHF3-202ENST00000393387 MORC4Q8TE76 937 aa3.94□□□□□ -1.78
PHF3-202ENST00000393387 PAK3O75914 559 aaPredicted RBP3.93□□□□□ -1.78
PHF3-202ENST00000393387 RTF1Q92541 710 aaKnown RBP3.93□□□□□ -1.78
PHF3-202ENST00000393387 FAM107BQ9H098 131 aa3.93□□□□□ -1.78
PHF3-202ENST00000393387 HOMEZQ8IX15 550 aa3.93□□□□□ -1.78
PHF3-202ENST00000393387 CALCOCO1Q9P1Z2 691 aa3.93□□□□□ -1.78
PHF3-202ENST00000393387 CCDC175P0C221 793 aa3.93□□□□□ -1.78
PHF3-202ENST00000393387 PAIP2Q9BPZ3 127 aaKnown RBP3.93□□□□□ -1.78
PHF3-202ENST00000393387 NOL10Q9BSC4 688 aaKnown RBP3.93□□□□□ -1.78
PHF3-202ENST00000393387 HOOK1Q9UJC3 728 aaKnown RBP3.93□□□□□ -1.78
PHF3-202ENST00000393387 LMAN1P49257 510 aa3.93□□□□□ -1.78
PHF3-202ENST00000393387 XPCQ01831 940 aaPredicted RBP3.93□□□□□ -1.78
PHF3-202ENST00000393387 SPATA24Q86W54 205 aa3.93□□□□□ -1.78
PHF3-202ENST00000393387 DDX11Q96FC9 970 aa3.93□□□□□ -1.78
PHF3-202ENST00000393387 ANO2Q9NQ90 1003 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms