RNA–Protein interactions for RNA: ENST00000393238.7

TMCC1-201, Transcript of transmembrane and coiled-coil domain family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC1, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1-201ENST00000393238 GOLGA6L6A8MZA4 724 aa11.72□□□□□ -0.53
TMCC1-201ENST00000393238 GOLGA6L4A6NEF3 574 aa11.72□□□□□ -0.53
TMCC1-201ENST00000393238 PLEKHO1Q53GL0 409 aaPredicted RBP11.72□□□□□ -0.53
TMCC1-201ENST00000393238 EPRSP07814 1512 aaKnown RBP11.72□□□□□ -0.53
TMCC1-201ENST00000393238 RGS3P49796 1198 aa11.72□□□□□ -0.53
TMCC1-201ENST00000393238 CHMP4CQ96CF2 233 aa11.72□□□□□ -0.53
TMCC1-201ENST00000393238 ADGRL1O94910 1474 aa11.71□□□□□ -0.53
TMCC1-201ENST00000393238 PRXQ9BXM0 1461 aa11.71□□□□□ -0.53
TMCC1-201ENST00000393238 HSP90AB1P08238 724 aaKnown RBP11.71□□□□□ -0.53
TMCC1-201ENST00000393238 TATP17735 454 aaPredicted RBP11.71□□□□□ -0.53
TMCC1-201ENST00000393238 RBM33Q96EV2 1170 aaKnown RBP11.71□□□□□ -0.53
TMCC1-201ENST00000393238 TAOK2Q9UL54 1235 aa11.71□□□□□ -0.53
TMCC1-201ENST00000393238 SUPT16HQ9Y5B9 1047 aaKnown RBP11.71□□□□□ -0.54
TMCC1-201ENST00000393238 ANKRD30BQ9BXX2 1392 aa11.71□□□□□ -0.54
TMCC1-201ENST00000393238 CLSTN1O94985 981 aa11.71□□□□□ -0.54
TMCC1-201ENST00000393238 CTDP1Q9Y5B0 961 aaPredicted RBP11.7□□□□□ -0.54
TMCC1-201ENST00000393238 CCDC34Q96HJ3 373 aa11.69□□□□□ -0.54
TMCC1-201ENST00000393238 HTATSF1O43719 755 aaKnown RBP11.69□□□□□ -0.54
TMCC1-201ENST00000393238 LRPPRCP42704 1394 aaKnown RBP11.69□□□□□ -0.54
TMCC1-201ENST00000393238 APBB1O00213 710 aa11.69□□□□□ -0.54
TMCC1-201ENST00000393238 VPS37DQ86XT2 251 aa11.69□□□□□ -0.54
TMCC1-201ENST00000393238 GAS2L2Q8NHY3 880 aa11.69□□□□□ -0.54
TMCC1-201ENST00000393238 STRN4Q9NRL3 753 aa11.69□□□□□ -0.54
TMCC1-201ENST00000393238 NRDCO43847 1150 aa11.68□□□□□ -0.54
TMCC1-201ENST00000393238 PEG3Q9GZU2 1588 aa11.68□□□□□ -0.54
TMCC1-201ENST00000393238 ROCK1Q13464 1354 aa11.68□□□□□ -0.54
TMCC1-201ENST00000393238 PRDM11Q9NQV5 511 aa11.68□□□□□ -0.54
TMCC1-201ENST00000393238 C9orf78Q9NZ63 289 aaPredicted RBP11.68□□□□□ -0.54
TMCC1-201ENST00000393238 TOM1L2Q6ZVM7 507 aa11.67□□□□□ -0.54
TMCC1-201ENST00000393238 URB2Q14146 1524 aaKnown RBP11.67□□□□□ -0.54
TMCC1-201ENST00000393238 RCAN3Q9UKA8 241 aa11.67□□□□□ -0.54
TMCC1-201ENST00000393238 CCDC141Q6ZP82 1450 aa11.67□□□□□ -0.54
TMCC1-201ENST00000393238 HSCBQ8IWL3 235 aa11.67□□□□□ -0.54
TMCC1-201ENST00000393238 PRAM1Q96QH2 718 aa11.67□□□□□ -0.54
TMCC1-201ENST00000393238 SPG7Q9UQ90 795 aa11.67□□□□□ -0.54
TMCC1-201ENST00000393238 KIF14Q15058 1648 aa11.66□□□□□ -0.54
TMCC1-201ENST00000393238 TMEM132EQ6IEE7 984 aa11.66□□□□□ -0.54
TMCC1-201ENST00000393238 RTEL1-TNFRSF6BF6WH68 1400 aa11.66□□□□□ -0.54
TMCC1-201ENST00000393238 TOM1O60784 492 aa11.66□□□□□ -0.54
TMCC1-201ENST00000393238 EIF2S2P20042 333 aaKnown RBP11.66□□□□□ -0.54
TMCC1-201ENST00000393238 CCDC146Q8IYE0 955 aa11.66□□□□□ -0.54
TMCC1-201ENST00000393238 CABP2Q9NPB3 220 aa11.66□□□□□ -0.54
TMCC1-201ENST00000393238 CWC22Q9HCG8 908 aaKnown RBP11.66□□□□□ -0.54
TMCC1-201ENST00000393238 E9PSI1 815 aa11.65□□□□□ -0.54
TMCC1-201ENST00000393238 GNAI1P63096 354 aa11.65□□□□□ -0.54
TMCC1-201ENST00000393238 KCNH5Q8NCM2 988 aa11.65□□□□□ -0.54
TMCC1-201ENST00000393238 SLC26A8Q96RN1 970 aa11.65□□□□□ -0.54
TMCC1-201ENST00000393238 KIF6Q6ZMV9 814 aa11.65□□□□□ -0.54
TMCC1-201ENST00000393238 NUTM2GQ5VZR2 741 aa11.64□□□□□ -0.55
TMCC1-201ENST00000393238 API5Q9BZZ5 524 aaKnown RBP11.64□□□□□ -0.55
TMCC1-201ENST00000393238 KIF3AQ9Y496 699 aa11.64□□□□□ -0.55
TMCC1-201ENST00000393238 DAPK1P53355 1430 aa11.64□□□□□ -0.55
TMCC1-201ENST00000393238 USP35Q9P2H5 1018 aa11.64□□□□□ -0.55
TMCC1-201ENST00000393238 TOMM22Q9NS69 142 aa11.64□□□□□ -0.55
TMCC1-201ENST00000393238 TRIM6-TRIM34B2RNG4 842 aa11.64□□□□□ -0.55
TMCC1-201ENST00000393238 PNISRQ8TF01 805 aaKnown RBP11.63□□□□□ -0.55
TMCC1-201ENST00000393238 CFAP70Q5T0N1 1121 aa11.63□□□□□ -0.55
TMCC1-201ENST00000393238 TSPYL4Q9UJ04 414 aa11.63□□□□□ -0.55
TMCC1-201ENST00000393238 ATAD2Q6PL18 1390 aa11.63□□□□□ -0.55
TMCC1-201ENST00000393238 SUPT6HQ7KZ85 1726 aaKnown RBP11.63□□□□□ -0.55
TMCC1-201ENST00000393238 ERBINQ96RT1 1412 aa11.63□□□□□ -0.55
TMCC1-201ENST00000393238 FBXW7Q969H0 707 aa11.63□□□□□ -0.55
TMCC1-201ENST00000393238 CDK19Q9BWU1 502 aa11.62□□□□□ -0.55
TMCC1-201ENST00000393238 HSP90AB4PQ58FF6 505 aa11.62□□□□□ -0.55
TMCC1-201ENST00000393238 ERICH6BQ5W0A0 696 aa11.62□□□□□ -0.55
TMCC1-201ENST00000393238 RIPK4P57078 832 aa11.62□□□□□ -0.55
TMCC1-201ENST00000393238 KIAA1107Q9UPP5 1409 aa11.62□□□□□ -0.55
TMCC1-201ENST00000393238 RUNDC1Q96C34 613 aa11.61□□□□□ -0.55
TMCC1-201ENST00000393238 FANCAO15360 1455 aa11.61□□□□□ -0.55
TMCC1-201ENST00000393238 RIC3Q7Z5B4 369 aa11.61□□□□□ -0.55
TMCC1-201ENST00000393238 RBM42Q9BTD8 480 aaKnown RBP11.61□□□□□ -0.55
TMCC1-201ENST00000393238 MARCH6O60337 910 aa11.6□□□□□ -0.55
TMCC1-201ENST00000393238 ARAP1Q96P48 1450 aa11.6□□□□□ -0.55
TMCC1-201ENST00000393238 ZNF608Q9ULD9 1512 aaPredicted RBP11.6□□□□□ -0.55
TMCC1-201ENST00000393238 ZKSCAN2Q63HK3 967 aa11.6□□□□□ -0.55
TMCC1-201ENST00000393238 CADPS2Q86UW7 1296 aa11.6□□□□□ -0.55
TMCC1-201ENST00000393238 GGNBP2Q9H3C7 697 aa11.6□□□□□ -0.55
TMCC1-201ENST00000393238 ARHGEF11O15085 1522 aa11.59□□□□□ -0.55
TMCC1-201ENST00000393238 CABP4P57796 275 aa11.59□□□□□ -0.55
TMCC1-201ENST00000393238 SYNE3Q6ZMZ3 975 aa11.59□□□□□ -0.55
TMCC1-201ENST00000393238 PTMAP06454 111 aaKnown RBP11.59□□□□□ -0.55
TMCC1-201ENST00000393238 G3BP1Q13283 466 aaKnown RBP eCLIP11.59□□□□□ -0.55
TMCC1-201ENST00000393238 RRP7AQ9Y3A4 280 aaKnown RBP11.58□□□□□ -0.55
TMCC1-201ENST00000393238 L1TD1Q5T7N2 865 aaKnown RBP11.58□□□□□ -0.56
TMCC1-201ENST00000393238 PPP1R1BQ9UD71 204 aaPredicted RBP11.58□□□□□ -0.56
TMCC1-201ENST00000393238 FKBP5Q13451 457 aaPredicted RBP11.58□□□□□ -0.56
TMCC1-201ENST00000393238 AKAP17AQ02040 695 aaKnown RBP11.58□□□□□ -0.56
TMCC1-201ENST00000393238 TRIM44Q96DX7 344 aaPredicted RBP11.58□□□□□ -0.56
TMCC1-201ENST00000393238 TCEAL9Q9UHQ7 104 aa11.58□□□□□ -0.56
TMCC1-201ENST00000393238 RUFY2Q8WXA3 655 aa11.57□□□□□ -0.56
TMCC1-201ENST00000393238 TNRQ92752 1358 aa11.57□□□□□ -0.56
TMCC1-201ENST00000393238 CHAF1AQ13111 956 aaPredicted RBP11.57□□□□□ -0.56
TMCC1-201ENST00000393238 NGLY1Q96IV0 654 aa11.57□□□□□ -0.56
TMCC1-201ENST00000393238 MSH6P52701 1360 aa11.57□□□□□ -0.56
TMCC1-201ENST00000393238 VPS53Q5VIR6 699 aa11.57□□□□□ -0.56
TMCC1-201ENST00000393238 ELL2O00472 640 aaPredicted RBP11.56□□□□□ -0.56
TMCC1-201ENST00000393238 FAM135AQ9P2D6 1515 aa11.56□□□□□ -0.56
TMCC1-201ENST00000393238 ASXL2Q76L83 1435 aa11.56□□□□□ -0.56
TMCC1-201ENST00000393238 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.56□□□□□ -0.56
TMCC1-201ENST00000393238 IFIT2P09913 472 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms