RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 STAC3Q96MF2 364 aa13.56□□□□□ -0.24
CALD1-203ENST00000393118 TESK2Q96S53 571 aa13.56□□□□□ -0.24
CALD1-203ENST00000393118 ADGRF5Q8IZF2 1346 aa13.56□□□□□ -0.24
CALD1-203ENST00000393118 SHANK2Q9UPX8 1470 aa13.56□□□□□ -0.24
CALD1-203ENST00000393118 VGFO15240 615 aaPredicted RBP13.56□□□□□ -0.24
CALD1-203ENST00000393118 SKAP1Q86WV1 359 aa13.56□□□□□ -0.24
CALD1-203ENST00000393118 SOX12O15370 315 aa13.55□□□□□ -0.24
CALD1-203ENST00000393118 ABCC10Q5T3U5 1492 aa13.55□□□□□ -0.24
CALD1-203ENST00000393118 CABP2Q9NPB3 220 aa13.55□□□□□ -0.24
CALD1-203ENST00000393118 PLEKHG5O94827 1062 aa13.54□□□□□ -0.24
CALD1-203ENST00000393118 PLCH2O75038 1416 aa13.54□□□□□ -0.24
CALD1-203ENST00000393118 KDM5BQ9UGL1 1544 aa13.54□□□□□ -0.24
CALD1-203ENST00000393118 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.53□□□□□ -0.24
CALD1-203ENST00000393118 COG6Q9Y2V7 657 aa13.53□□□□□ -0.24
CALD1-203ENST00000393118 MBD5Q9P267 1494 aa13.52□□□□□ -0.24
CALD1-203ENST00000393118 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.24
CALD1-203ENST00000393118 E9PSI1 815 aa13.52□□□□□ -0.24
CALD1-203ENST00000393118 EVC2Q86UK5 1308 aa13.52□□□□□ -0.25
CALD1-203ENST00000393118 PER1O15534 1290 aaPredicted RBP13.52□□□□□ -0.25
CALD1-203ENST00000393118 SLC4A3P48751 1232 aa13.52□□□□□ -0.25
CALD1-203ENST00000393118 HDGFL2Q7Z4V5 671 aaPredicted RBP13.52□□□□□ -0.25
CALD1-203ENST00000393118 MTHFSP49914 203 aa13.51□□□□□ -0.25
CALD1-203ENST00000393118 UHRF1BP1Q6BDS2 1440 aa13.51□□□□□ -0.25
CALD1-203ENST00000393118 C20orf194Q5TEA3 1177 aa13.51□□□□□ -0.25
CALD1-203ENST00000393118 ADGRL1O94910 1474 aa13.51□□□□□ -0.25
CALD1-203ENST00000393118 ABCA8O94911 1581 aa13.51□□□□□ -0.25
CALD1-203ENST00000393118 GGNBP2Q9H3C7 697 aa13.5□□□□□ -0.25
CALD1-203ENST00000393118 BRPF3Q9ULD4 1205 aa13.5□□□□□ -0.25
CALD1-203ENST00000393118 FANCAO15360 1455 aa13.5□□□□□ -0.25
CALD1-203ENST00000393118 BCAR3O75815 825 aa13.5□□□□□ -0.25
CALD1-203ENST00000393118 TERF2IPQ9NYB0 399 aa13.5□□□□□ -0.25
CALD1-203ENST00000393118 NUTM2FA1L443 756 aa13.49□□□□□ -0.25
CALD1-203ENST00000393118 A2MP01023 1474 aa13.49□□□□□ -0.25
CALD1-203ENST00000393118 ARHGEF12Q9NZN5 1544 aa13.49□□□□□ -0.25
CALD1-203ENST00000393118 CENPQQ7L2Z9 268 aaPredicted RBP13.48□□□□□ -0.25
CALD1-203ENST00000393118 PANK1Q8TE04 598 aa13.48□□□□□ -0.25
CALD1-203ENST00000393118 MYH16Q9H6N6 1097 aa13.48□□□□□ -0.25
CALD1-203ENST00000393118 SMC4Q9NTJ3 1288 aa13.47□□□□□ -0.25
CALD1-203ENST00000393118 PARD3Q8TEW0 1356 aa13.47□□□□□ -0.25
CALD1-203ENST00000393118 DUOX2Q9NRD8 1548 aa13.47□□□□□ -0.25
CALD1-203ENST00000393118 FAM69CQ0P6D2 419 aa13.47□□□□□ -0.25
CALD1-203ENST00000393118 TCP11L2Q8N4U5 519 aa13.47□□□□□ -0.25
CALD1-203ENST00000393118 ADGBQ8N7X0 1667 aa13.47□□□□□ -0.25
CALD1-203ENST00000393118 C14orf37Q86TY3 774 aa13.46□□□□□ -0.25
CALD1-203ENST00000393118 ITPRIPQ8IWB1 547 aa13.46□□□□□ -0.25
CALD1-203ENST00000393118 HSP90AA1P07900 732 aaKnown RBP13.46□□□□□ -0.26
CALD1-203ENST00000393118 PODXL2Q9NZ53 605 aa13.46□□□□□ -0.26
CALD1-203ENST00000393118 AMER1Q5JTC6 1135 aaPredicted RBP13.45□□□□□ -0.26
CALD1-203ENST00000393118 ABCC2Q92887 1545 aa13.45□□□□□ -0.26
CALD1-203ENST00000393118 RUNDC1Q96C34 613 aa13.45□□□□□ -0.26
CALD1-203ENST00000393118 ZBTB7CA1YPR0 619 aa13.44□□□□□ -0.26
CALD1-203ENST00000393118 BECN1Q14457 450 aa13.44□□□□□ -0.26
CALD1-203ENST00000393118 CD109Q6YHK3 1445 aa13.44□□□□□ -0.26
CALD1-203ENST00000393118 SAMD9LQ8IVG5 1584 aa13.44□□□□□ -0.26
CALD1-203ENST00000393118 SCAF11Q99590 1463 aaKnown RBP13.43□□□□□ -0.26
CALD1-203ENST00000393118 MS4A1P11836 297 aa13.43□□□□□ -0.26
CALD1-203ENST00000393118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.43□□□□□ -0.26
CALD1-203ENST00000393118 ELL2O00472 640 aaPredicted RBP13.43□□□□□ -0.26
CALD1-203ENST00000393118 SPRYD3Q8NCJ5 442 aa13.43□□□□□ -0.26
CALD1-203ENST00000393118 RSPH6AQ9H0K4 717 aa13.43□□□□□ -0.26
CALD1-203ENST00000393118 PRAM1Q96QH2 718 aa13.42□□□□□ -0.26
CALD1-203ENST00000393118 A0A0U1RQG5 324 aaPredicted RBP13.42□□□□□ -0.26
CALD1-203ENST00000393118 SLFN5Q08AF3 891 aa13.42□□□□□ -0.26
CALD1-203ENST00000393118 FAM161AQ3B820 660 aa13.42□□□□□ -0.26
CALD1-203ENST00000393118 NOS1P29475 1434 aa13.41□□□□□ -0.26
CALD1-203ENST00000393118 DUSP27Q5VZP5 1158 aa13.41□□□□□ -0.26
CALD1-203ENST00000393118 PNNQ9H307 717 aaKnown RBP13.41□□□□□ -0.26
CALD1-203ENST00000393118 NSD3Q9BZ95 1437 aa13.41□□□□□ -0.26
CALD1-203ENST00000393118 CDC42BPAQ5VT25 1732 aa13.41□□□□□ -0.26
CALD1-203ENST00000393118 LRPPRCP42704 1394 aaKnown RBP13.4□□□□□ -0.26
CALD1-203ENST00000393118 ERCC6L2Q5T890 1561 aa13.4□□□□□ -0.26
CALD1-203ENST00000393118 KDM5CP41229 1560 aa13.4□□□□□ -0.26
CALD1-203ENST00000393118 ASXL2Q76L83 1435 aa13.4□□□□□ -0.26
CALD1-203ENST00000393118 SLKQ9H2G2 1235 aaPredicted RBP13.4□□□□□ -0.26
CALD1-203ENST00000393118 RWDD1Q9H446 243 aaPredicted RBP13.4□□□□□ -0.26
CALD1-203ENST00000393118 TTC37Q6PGP7 1564 aa13.4□□□□□ -0.26
CALD1-203ENST00000393118 BACH2Q9BYV9 841 aa13.4□□□□□ -0.26
CALD1-203ENST00000393118 COL17A1Q9UMD9 1497 aaPredicted RBP13.39□□□□□ -0.27
CALD1-203ENST00000393118 ARHGEF5Q12774 1597 aa13.39□□□□□ -0.27
CALD1-203ENST00000393118 IDI1Q13907 227 aa13.39□□□□□ -0.27
CALD1-203ENST00000393118 PLA2R1Q13018 1463 aa13.39□□□□□ -0.27
CALD1-203ENST00000393118 PMFBP1Q8TBY8 1022 aa13.39□□□□□ -0.27
CALD1-203ENST00000393118 WDR7Q9Y4E6 1490 aa13.38□□□□□ -0.27
CALD1-203ENST00000393118 RIPK4P57078 832 aa13.38□□□□□ -0.27
CALD1-203ENST00000393118 HSP90AA2PQ14568 343 aaPredicted RBP13.38□□□□□ -0.27
CALD1-203ENST00000393118 WWC1Q8IX03 1113 aa13.38□□□□□ -0.27
CALD1-203ENST00000393118 TSR2Q969E8 191 aaKnown RBP13.38□□□□□ -0.27
CALD1-203ENST00000393118 BCORL1Q5H9F3 1711 aa13.38□□□□□ -0.27
CALD1-203ENST00000393118 HMOX1P09601 288 aa13.38□□□□□ -0.27
CALD1-203ENST00000393118 GSE1Q14687 1217 aa13.38□□□□□ -0.27
CALD1-203ENST00000393118 DIAPH1O60610 1272 aaKnown RBP13.37□□□□□ -0.27
CALD1-203ENST00000393118 CARD14Q9BXL6 1004 aa13.37□□□□□ -0.27
CALD1-203ENST00000393118 FBXO31Q5XUX0 539 aaPredicted RBP13.37□□□□□ -0.27
CALD1-203ENST00000393118 GPRASP1Q5JY77 1395 aa13.37□□□□□ -0.27
CALD1-203ENST00000393118 ZKSCAN2Q63HK3 967 aa13.36□□□□□ -0.27
CALD1-203ENST00000393118 NGEFQ8N5V2 710 aa13.36□□□□□ -0.27
CALD1-203ENST00000393118 PLEKHH1Q9ULM0 1364 aa13.36□□□□□ -0.27
CALD1-203ENST00000393118 IPO8O15397 1037 aaKnown RBP13.36□□□□□ -0.27
CALD1-203ENST00000393118 HDGFP51858 240 aaKnown RBP13.36□□□□□ -0.27
CALD1-203ENST00000393118 CABP1Q9NZU7 370 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms