RNA–Protein interactions for RNA: ENST00000392861.6

ZEB2-202, Transcript of zinc finger E-box binding homeobox 2, humanhuman

TSL 1 (best)

Gene ZEB2, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-202ENST00000392861 TRIM52Q96A61 297 aa19.32■□□□□ 0.68
ZEB2-202ENST00000392861 SLC4A1APQ9BWU0 796 aaKnown RBP19.3■□□□□ 0.68
ZEB2-202ENST00000392861 NWD1Q149M9 1564 aa19.3■□□□□ 0.68
ZEB2-202ENST00000392861 LRRC7Q96NW7 1537 aa19.29■□□□□ 0.68
ZEB2-202ENST00000392861 ACIN1Q9UKV3 1341 aaKnown RBP19.29■□□□□ 0.68
ZEB2-202ENST00000392861 DIP2AQ14689 1571 aa19.28■□□□□ 0.68
ZEB2-202ENST00000392861 XIRP1Q702N8 1843 aaKnown RBP19.28■□□□□ 0.68
ZEB2-202ENST00000392861 NEXMIFQ5QGS0 1516 aa19.27■□□□□ 0.68
ZEB2-202ENST00000392861 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.27■□□□□ 0.68
ZEB2-202ENST00000392861 RAB3GAP2Q9H2M9 1393 aa19.27■□□□□ 0.67
ZEB2-202ENST00000392861 CHGAP10645 457 aaKnown RBP19.26■□□□□ 0.67
ZEB2-202ENST00000392861 HDGFP51858 240 aaKnown RBP19.26■□□□□ 0.67
ZEB2-202ENST00000392861 NRXN3Q9Y4C0 1643 aa19.26■□□□□ 0.67
ZEB2-202ENST00000392861 CHD2O14647 1828 aaKnown RBP19.26■□□□□ 0.67
ZEB2-202ENST00000392861 ADAMTS13Q76LX8 1427 aa19.26■□□□□ 0.67
ZEB2-202ENST00000392861 SETBP1Q9Y6X0 1596 aa19.25■□□□□ 0.67
ZEB2-202ENST00000392861 ALKQ9UM73 1620 aa19.25■□□□□ 0.67
ZEB2-202ENST00000392861 NKTRP30414 1462 aaKnown RBP19.24■□□□□ 0.67
ZEB2-202ENST00000392861 PPP1R15AO75807 674 aaPredicted RBP19.23■□□□□ 0.67
ZEB2-202ENST00000392861 MPHOSPH9Q99550 1183 aa19.23■□□□□ 0.67
ZEB2-202ENST00000392861 SLC26A8Q96RN1 970 aa19.22■□□□□ 0.67
ZEB2-202ENST00000392861 PPLO60437 1756 aa19.21■□□□□ 0.67
ZEB2-202ENST00000392861 KCNA6P17658 529 aa19.2■□□□□ 0.66
ZEB2-202ENST00000392861 FOXD1Q16676 465 aa19.2■□□□□ 0.66
ZEB2-202ENST00000392861 TBX22Q9Y458 520 aa19.19■□□□□ 0.66
ZEB2-202ENST00000392861 CCDC144AA2RUR9 1427 aa19.18■□□□□ 0.66
ZEB2-202ENST00000392861 PIK3R4Q99570 1358 aa19.18■□□□□ 0.66
ZEB2-202ENST00000392861 UBAP1LF5GYI3 381 aa19.18■□□□□ 0.66
ZEB2-202ENST00000392861 HRCP23327 699 aa19.18■□□□□ 0.66
ZEB2-202ENST00000392861 NUTM2DQ5VT03 806 aaPredicted RBP19.18■□□□□ 0.66
ZEB2-202ENST00000392861 SPATA31E1Q6ZUB1 1445 aa19.17■□□□□ 0.66
ZEB2-202ENST00000392861 IFT172Q9UG01 1749 aa19.17■□□□□ 0.66
ZEB2-202ENST00000392861 SETD1AO15047 1707 aaKnown RBP19.16■□□□□ 0.66
ZEB2-202ENST00000392861 XRN1Q8IZH2 1706 aaKnown RBP19.16■□□□□ 0.66
ZEB2-202ENST00000392861 ZNF326Q5BKZ1 582 aaKnown RBP19.15■□□□□ 0.66
ZEB2-202ENST00000392861 BCANQ96GW7 911 aa19.15■□□□□ 0.66
ZEB2-202ENST00000392861 TMEM94Q12767 1356 aa19.14■□□□□ 0.65
ZEB2-202ENST00000392861 RPGRIP1LQ68CZ1 1315 aa19.13■□□□□ 0.65
ZEB2-202ENST00000392861 TOM1O60784 492 aa19.12■□□□□ 0.65
ZEB2-202ENST00000392861 SENP3Q9H4L4 574 aaPredicted RBP19.12■□□□□ 0.65
ZEB2-202ENST00000392861 PTPRUQ92729 1446 aa19.12■□□□□ 0.65
ZEB2-202ENST00000392861 NCOA3Q9Y6Q9 1424 aa19.09■□□□□ 0.65
ZEB2-202ENST00000392861 METP08581 1390 aa19.08■□□□□ 0.64
ZEB2-202ENST00000392861 ANKRD30BQ9BXX2 1392 aa19.08■□□□□ 0.64
ZEB2-202ENST00000392861 VGFO15240 615 aaPredicted RBP19.08■□□□□ 0.64
ZEB2-202ENST00000392861 PROSER2Q86WR7 435 aaPredicted RBP19.07■□□□□ 0.64
ZEB2-202ENST00000392861 PRAG1Q86YV5 1406 aa19.07■□□□□ 0.64
ZEB2-202ENST00000392861 PIP4K2BP78356 416 aa19.03■□□□□ 0.64
ZEB2-202ENST00000392861 RBM33Q96EV2 1170 aaKnown RBP19.03■□□□□ 0.64
ZEB2-202ENST00000392861 AMOTL2Q9Y2J4 779 aa19.03■□□□□ 0.64
ZEB2-202ENST00000392861 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.03■□□□□ 0.64
ZEB2-202ENST00000392861 PIK3C2GO75747 1445 aa19.02■□□□□ 0.64
ZEB2-202ENST00000392861 NRXN1Q9ULB1 1477 aa19.02■□□□□ 0.64
ZEB2-202ENST00000392861 MSH6P52701 1360 aa19.02■□□□□ 0.63
ZEB2-202ENST00000392861 MYOM2P54296 1465 aa19.01■□□□□ 0.63
ZEB2-202ENST00000392861 PTCH1Q13635 1447 aa19.01■□□□□ 0.63
ZEB2-202ENST00000392861 ADGRF5Q8IZF2 1346 aa19■□□□□ 0.63
ZEB2-202ENST00000392861 RGL3Q3MIN7 710 aa19■□□□□ 0.63
ZEB2-202ENST00000392861 SCAF1Q9H7N4 1312 aaKnown RBP18.99■□□□□ 0.63
ZEB2-202ENST00000392861 FAM135BQ49AJ0 1406 aa18.99■□□□□ 0.63
ZEB2-202ENST00000392861 ROBO1Q9Y6N7 1651 aa18.99■□□□□ 0.63
ZEB2-202ENST00000392861 DCCP43146 1447 aa18.99■□□□□ 0.63
ZEB2-202ENST00000392861 ASXL1Q8IXJ9 1541 aa18.99■□□□□ 0.63
ZEB2-202ENST00000392861 HSPA1LP34931 641 aa18.98■□□□□ 0.63
ZEB2-202ENST00000392861 LAMC1P11047 1609 aa18.98■□□□□ 0.63
ZEB2-202ENST00000392861 NALCNQ8IZF0 1738 aa18.98■□□□□ 0.63
ZEB2-202ENST00000392861 KNDC1Q76NI1 1749 aa18.97■□□□□ 0.63
ZEB2-202ENST00000392861 TECPR2O15040 1411 aa18.94■□□□□ 0.62
ZEB2-202ENST00000392861 ADGRL3Q9HAR2 1447 aa18.94■□□□□ 0.62
ZEB2-202ENST00000392861 C19orf44Q9H6X5 657 aa18.94■□□□□ 0.62
ZEB2-202ENST00000392861 ROBO2Q9HCK4 1378 aa18.93■□□□□ 0.62
ZEB2-202ENST00000392861 CADPS2Q86UW7 1296 aa18.9■□□□□ 0.62
ZEB2-202ENST00000392861 SLAIN2Q9P270 581 aa18.9■□□□□ 0.62
ZEB2-202ENST00000392861 LRPPRCP42704 1394 aaKnown RBP18.89■□□□□ 0.62
ZEB2-202ENST00000392861 C14orf37Q86TY3 774 aa18.89■□□□□ 0.61
ZEB2-202ENST00000392861 DHX57Q6P158 1386 aaKnown RBP18.89■□□□□ 0.61
ZEB2-202ENST00000392861 MST1RQ04912 1400 aa18.88■□□□□ 0.61
ZEB2-202ENST00000392861 C14orf93Q9H972 538 aaKnown RBP18.87■□□□□ 0.61
ZEB2-202ENST00000392861 ABCC11Q96J66 1382 aa18.87■□□□□ 0.61
ZEB2-202ENST00000392861 ADGRB1O14514 1584 aa18.87■□□□□ 0.61
ZEB2-202ENST00000392861 AHDC1Q5TGY3 1603 aaPredicted RBP18.87■□□□□ 0.61
ZEB2-202ENST00000392861 ATF3P18847 181 aa18.86■□□□□ 0.61
ZEB2-202ENST00000392861 PHLPP1O60346 1717 aa18.86■□□□□ 0.61
ZEB2-202ENST00000392861 YTHDC2Q9H6S0 1430 aaKnown RBP18.86■□□□□ 0.61
ZEB2-202ENST00000392861 CDC42BPGQ6DT37 1551 aa18.86■□□□□ 0.61
ZEB2-202ENST00000392861 STAC3Q96MF2 364 aa18.85■□□□□ 0.61
ZEB2-202ENST00000392861 COL16A1Q07092 1604 aaPredicted RBP18.85■□□□□ 0.61
ZEB2-202ENST00000392861 MED1Q15648 1581 aaPredicted RBP18.85■□□□□ 0.61
ZEB2-202ENST00000392861 TRIM26Q12899 539 aaPredicted RBP18.83■□□□□ 0.6
ZEB2-202ENST00000392861 NHSL1Q5SYE7 1610 aa18.83■□□□□ 0.6
ZEB2-202ENST00000392861 CFAP70Q5T0N1 1121 aa18.82■□□□□ 0.6
ZEB2-202ENST00000392861 TMEM132EQ6IEE7 984 aa18.82■□□□□ 0.6
ZEB2-202ENST00000392861 DLC1Q96QB1 1528 aa18.82■□□□□ 0.6
ZEB2-202ENST00000392861 DCAF11Q8TEB1 546 aa18.8■□□□□ 0.6
ZEB2-202ENST00000392861 KIAA1210Q9ULL0 1709 aa18.8■□□□□ 0.6
ZEB2-202ENST00000392861 BRINP3Q76B58 766 aa18.79■□□□□ 0.6
ZEB2-202ENST00000392861 C1orf167Q5SNV9 1468 aa18.79■□□□□ 0.6
ZEB2-202ENST00000392861 SIRT1Q96EB6 747 aa18.79■□□□□ 0.6
ZEB2-202ENST00000392861 DISP3Q9P2K9 1392 aa18.78■□□□□ 0.6
ZEB2-202ENST00000392861 PLEKHH1Q9ULM0 1364 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms