RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.66■□□□□ 0.26
ERCC2-204ENST00000391945 CEBPAP49715 358 aaPredicted RBP16.65■□□□□ 0.26
ERCC2-204ENST00000391945 SLC26A8Q96RN1 970 aa16.65■□□□□ 0.26
ERCC2-204ENST00000391945 FTSJ3Q8IY81 847 aaKnown RBP16.64■□□□□ 0.25
ERCC2-204ENST00000391945 PNISRQ8TF01 805 aaKnown RBP16.64■□□□□ 0.25
ERCC2-204ENST00000391945 PPP2R1AP30153 589 aa16.64■□□□□ 0.25
ERCC2-204ENST00000391945 PLIN1O60240 522 aa16.63■□□□□ 0.25
ERCC2-204ENST00000391945 ANP32EQ9BTT0 268 aa16.63■□□□□ 0.25
ERCC2-204ENST00000391945 NOS1P29475 1434 aa16.63■□□□□ 0.25
ERCC2-204ENST00000391945 TTC37Q6PGP7 1564 aa16.63■□□□□ 0.25
ERCC2-204ENST00000391945 RPGRIP1LQ68CZ1 1315 aa16.62■□□□□ 0.25
ERCC2-204ENST00000391945 HAP1P54257 671 aaPredicted RBP16.62■□□□□ 0.25
ERCC2-204ENST00000391945 BRD4O60885 1362 aaPredicted RBP16.61■□□□□ 0.25
ERCC2-204ENST00000391945 MTHFSP49914 203 aa16.61■□□□□ 0.25
ERCC2-204ENST00000391945 PNNQ9H307 717 aaKnown RBP16.61■□□□□ 0.25
ERCC2-204ENST00000391945 DISP3Q9P2K9 1392 aa16.61■□□□□ 0.25
ERCC2-204ENST00000391945 PDE3BQ13370 1112 aa16.6■□□□□ 0.25
ERCC2-204ENST00000391945 SAMD9LQ8IVG5 1584 aa16.6■□□□□ 0.25
ERCC2-204ENST00000391945 RGS3P49796 1198 aa16.6■□□□□ 0.25
ERCC2-204ENST00000391945 CDCA7LQ96GN5 454 aa16.6■□□□□ 0.25
ERCC2-204ENST00000391945 RTEL1-TNFRSF6BF6WH68 1400 aa16.59■□□□□ 0.25
ERCC2-204ENST00000391945 LRRIQ1Q96JM4 1722 aa16.59■□□□□ 0.25
ERCC2-204ENST00000391945 WAPLQ7Z5K2 1190 aa16.59■□□□□ 0.25
ERCC2-204ENST00000391945 PRAG1Q86YV5 1406 aa16.59■□□□□ 0.25
ERCC2-204ENST00000391945 GCC2Q8IWJ2 1684 aa16.59■□□□□ 0.25
ERCC2-204ENST00000391945 UHRF1BP1LA0JNW5 1464 aa16.58■□□□□ 0.25
ERCC2-204ENST00000391945 CABP1Q9NZU7 370 aa16.58■□□□□ 0.25
ERCC2-204ENST00000391945 TEX14Q8IWB6 1497 aa16.58■□□□□ 0.24
ERCC2-204ENST00000391945 LTV1Q96GA3 475 aaPredicted RBP16.57■□□□□ 0.24
ERCC2-204ENST00000391945 COG3Q96JB2 828 aa16.57■□□□□ 0.24
ERCC2-204ENST00000391945 CDK19Q9BWU1 502 aa16.57■□□□□ 0.24
ERCC2-204ENST00000391945 BCL2L13Q9BXK5 485 aa16.56■□□□□ 0.24
ERCC2-204ENST00000391945 RALGAPBQ86X10 1494 aa16.56■□□□□ 0.24
ERCC2-204ENST00000391945 A0A0G2JS52 829 aa16.56■□□□□ 0.24
ERCC2-204ENST00000391945 CLUAP1Q96AJ1 413 aa16.56■□□□□ 0.24
ERCC2-204ENST00000391945 ATP7AQ04656 1500 aa16.55■□□□□ 0.24
ERCC2-204ENST00000391945 ARHGEF12Q9NZN5 1544 aa16.55■□□□□ 0.24
ERCC2-204ENST00000391945 C14orf93Q9H972 538 aaKnown RBP16.55■□□□□ 0.24
ERCC2-204ENST00000391945 ZCCHC11Q5TAX3 1644 aaKnown RBP16.54■□□□□ 0.24
ERCC2-204ENST00000391945 TESK2Q96S53 571 aa16.54■□□□□ 0.24
ERCC2-204ENST00000391945 AMPHP49418 695 aa16.53■□□□□ 0.24
ERCC2-204ENST00000391945 MYO5CQ9NQX4 1742 aa16.53■□□□□ 0.24
ERCC2-204ENST00000391945 ARHGEF5Q12774 1597 aa16.53■□□□□ 0.24
ERCC2-204ENST00000391945 CFAP65Q6ZU64 1925 aaKnown RBP16.52■□□□□ 0.24
ERCC2-204ENST00000391945 PMFBP1Q8TBY8 1022 aa16.52■□□□□ 0.23
ERCC2-204ENST00000391945 EXOC6Q8TAG9 804 aa16.52■□□□□ 0.23
ERCC2-204ENST00000391945 MYH16Q9H6N6 1097 aa16.52■□□□□ 0.23
ERCC2-204ENST00000391945 SCAF11Q99590 1463 aaKnown RBP16.51■□□□□ 0.23
ERCC2-204ENST00000391945 CDC42BPAQ5VT25 1732 aa16.51■□□□□ 0.23
ERCC2-204ENST00000391945 DIAPH1O60610 1272 aaKnown RBP16.51■□□□□ 0.23
ERCC2-204ENST00000391945 NUTM2GQ5VZR2 741 aa16.51■□□□□ 0.23
ERCC2-204ENST00000391945 ELL2O00472 640 aaPredicted RBP16.51■□□□□ 0.23
ERCC2-204ENST00000391945 HMOX1P09601 288 aa16.51■□□□□ 0.23
ERCC2-204ENST00000391945 ERICH6BQ5W0A0 696 aa16.51■□□□□ 0.23
ERCC2-204ENST00000391945 THEMISQ8N1K5 641 aaPredicted RBP16.51■□□□□ 0.23
ERCC2-204ENST00000391945 RRP1P56182 461 aaKnown RBP16.5■□□□□ 0.23
ERCC2-204ENST00000391945 ADGBQ8N7X0 1667 aa16.49■□□□□ 0.23
ERCC2-204ENST00000391945 RTF1Q92541 710 aaKnown RBP16.49■□□□□ 0.23
ERCC2-204ENST00000391945 PREX2Q70Z35 1606 aa16.49■□□□□ 0.23
ERCC2-204ENST00000391945 NSD3Q9BZ95 1437 aa16.48■□□□□ 0.23
ERCC2-204ENST00000391945 SMC4Q9NTJ3 1288 aa16.48■□□□□ 0.23
ERCC2-204ENST00000391945 TCP11L2Q8N4U5 519 aa16.47■□□□□ 0.23
ERCC2-204ENST00000391945 UPF2Q9HAU5 1272 aaKnown RBP16.47■□□□□ 0.23
ERCC2-204ENST00000391945 POGZQ7Z3K3 1410 aa16.47■□□□□ 0.23
ERCC2-204ENST00000391945 RUNDC1Q96C34 613 aa16.47■□□□□ 0.23
ERCC2-204ENST00000391945 E9PSI1 815 aa16.46■□□□□ 0.23
ERCC2-204ENST00000391945 YEATS2Q9ULM3 1422 aa16.45■□□□□ 0.22
ERCC2-204ENST00000391945 RBM33Q96EV2 1170 aaKnown RBP16.45■□□□□ 0.22
ERCC2-204ENST00000391945 RIPK4P57078 832 aa16.45■□□□□ 0.22
ERCC2-204ENST00000391945 ABCC1P33527 1531 aa16.45■□□□□ 0.22
ERCC2-204ENST00000391945 CRBNQ96SW2 442 aa16.45■□□□□ 0.22
ERCC2-204ENST00000391945 MAST1Q9Y2H9 1570 aa16.44■□□□□ 0.22
ERCC2-204ENST00000391945 UHRF1BP1Q6BDS2 1440 aa16.43■□□□□ 0.22
ERCC2-204ENST00000391945 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
ERCC2-204ENST00000391945 TCERG1O14776 1098 aaKnown RBP16.42■□□□□ 0.22
ERCC2-204ENST00000391945 ITPRIPQ8IWB1 547 aa16.42■□□□□ 0.22
ERCC2-204ENST00000391945 ADCY10Q96PN6 1610 aa16.42■□□□□ 0.22
ERCC2-204ENST00000391945 PPP6R1Q9UPN7 881 aa16.42■□□□□ 0.22
ERCC2-204ENST00000391945 NLRP6P59044 892 aa16.41■□□□□ 0.22
ERCC2-204ENST00000391945 PSME1Q06323 249 aa16.41■□□□□ 0.22
ERCC2-204ENST00000391945 NUDT16Q96DE0 195 aaKnown RBP16.41■□□□□ 0.22
ERCC2-204ENST00000391945 CSB-PGBD3P0DP91 1061 aa16.41■□□□□ 0.22
ERCC2-204ENST00000391945 MS4A1P11836 297 aa16.41■□□□□ 0.22
ERCC2-204ENST00000391945 CCDC61Q9Y6R9 512 aa16.4■□□□□ 0.22
ERCC2-204ENST00000391945 COG6Q9Y2V7 657 aa16.4■□□□□ 0.22
ERCC2-204ENST00000391945 CALD1Q05682 793 aaKnown RBP16.4■□□□□ 0.22
ERCC2-204ENST00000391945 NOP58Q9Y2X3 529 aaKnown RBP16.4■□□□□ 0.22
ERCC2-204ENST00000391945 ATAD2Q6PL18 1390 aa16.4■□□□□ 0.22
ERCC2-204ENST00000391945 AMER1Q5JTC6 1135 aaPredicted RBP16.39■□□□□ 0.21
ERCC2-204ENST00000391945 NPATQ14207 1427 aa16.39■□□□□ 0.21
ERCC2-204ENST00000391945 ARXQ96QS3 562 aa16.39■□□□□ 0.21
ERCC2-204ENST00000391945 PER1O15534 1290 aaPredicted RBP16.38■□□□□ 0.21
ERCC2-204ENST00000391945 FBLN1P23142 703 aa16.38■□□□□ 0.21
ERCC2-204ENST00000391945 RRS1Q15050 365 aaKnown RBP16.38■□□□□ 0.21
ERCC2-204ENST00000391945 PLA2R1Q13018 1463 aa16.38■□□□□ 0.21
ERCC2-204ENST00000391945 SPATA31E1Q6ZUB1 1445 aa16.38■□□□□ 0.21
ERCC2-204ENST00000391945 ANKLE2Q86XL3 938 aa16.38■□□□□ 0.21
ERCC2-204ENST00000391945 NEO1Q92859 1461 aa16.38■□□□□ 0.21
ERCC2-204ENST00000391945 IPO8O15397 1037 aaKnown RBP16.38■□□□□ 0.21
ERCC2-204ENST00000391945 ATP10AO60312 1499 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms