RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 ADGRF5Q8IZF2 1346 aa26.02■■□□□ 1.76
ERCC2-203ENST00000391944 NRXN1Q9ULB1 1477 aa26.02■■□□□ 1.76
ERCC2-203ENST00000391944 ZBED9Q6R2W3 1325 aa26■■□□□ 1.75
ERCC2-203ENST00000391944 MYBBP1AQ9BQG0 1328 aaKnown RBP26■■□□□ 1.75
ERCC2-203ENST00000391944 ZMYM4Q5VZL5 1548 aa25.99■■□□□ 1.75
ERCC2-203ENST00000391944 NOS1P29475 1434 aa25.99■■□□□ 1.75
ERCC2-203ENST00000391944 CFAP70Q5T0N1 1121 aa25.99■■□□□ 1.75
ERCC2-203ENST00000391944 TMC1Q8TDI8 760 aa25.99■■□□□ 1.75
ERCC2-203ENST00000391944 EIF3AQ14152 1382 aaKnown RBP25.98■■□□□ 1.75
ERCC2-203ENST00000391944 FKBP8Q14318 412 aa25.98■■□□□ 1.75
ERCC2-203ENST00000391944 BRD4O60885 1362 aaPredicted RBP25.98■■□□□ 1.75
ERCC2-203ENST00000391944 PNISRQ8TF01 805 aaKnown RBP25.98■■□□□ 1.75
ERCC2-203ENST00000391944 ARHGAP31Q2M1Z3 1444 aa25.98■■□□□ 1.75
ERCC2-203ENST00000391944 ZC3H13Q5T200 1668 aaKnown RBP25.97■■□□□ 1.75
ERCC2-203ENST00000391944 PARD3Q8TEW0 1356 aa25.97■■□□□ 1.75
ERCC2-203ENST00000391944 NEFLP07196 543 aa25.97■■□□□ 1.75
ERCC2-203ENST00000391944 SIGLEC1Q9BZZ2 1709 aa25.96■■□□□ 1.75
ERCC2-203ENST00000391944 PANK3Q9H999 370 aa25.96■■□□□ 1.75
ERCC2-203ENST00000391944 CHGAP10645 457 aaKnown RBP25.96■■□□□ 1.75
ERCC2-203ENST00000391944 CDCA8Q53HL2 280 aa25.96■■□□□ 1.75
ERCC2-203ENST00000391944 RPGRIP1LQ68CZ1 1315 aa25.94■■□□□ 1.74
ERCC2-203ENST00000391944 PPLO60437 1756 aa25.94■■□□□ 1.74
ERCC2-203ENST00000391944 PIK3C2BO00750 1634 aa25.93■■□□□ 1.74
ERCC2-203ENST00000391944 TSPOAP1O95153 1857 aa25.92■■□□□ 1.74
ERCC2-203ENST00000391944 SLC24A1O60721 1099 aa25.92■■□□□ 1.74
ERCC2-203ENST00000391944 SYNMO15061 1565 aa25.91■■□□□ 1.74
ERCC2-203ENST00000391944 NLRP13Q86W25 1043 aa25.89■■□□□ 1.74
ERCC2-203ENST00000391944 SETBP1Q9Y6X0 1596 aa25.89■■□□□ 1.74
ERCC2-203ENST00000391944 LRPPRCP42704 1394 aaKnown RBP25.88■■□□□ 1.73
ERCC2-203ENST00000391944 PIK3C2GO75747 1445 aa25.88■■□□□ 1.73
ERCC2-203ENST00000391944 C14orf93Q9H972 538 aaKnown RBP25.86■■□□□ 1.73
ERCC2-203ENST00000391944 REREQ9P2R6 1566 aa25.84■■□□□ 1.73
ERCC2-203ENST00000391944 MYO3AQ8NEV4 1616 aa25.83■■□□□ 1.73
ERCC2-203ENST00000391944 CC2D1BQ5T0F9 858 aaKnown RBP25.83■■□□□ 1.73
ERCC2-203ENST00000391944 SLC52A1Q9NWF4 448 aa25.83■■□□□ 1.73
ERCC2-203ENST00000391944 KDM5AP29375 1690 aaKnown RBP25.82■■□□□ 1.72
ERCC2-203ENST00000391944 IDI1Q13907 227 aa25.81■■□□□ 1.72
ERCC2-203ENST00000391944 SBNO2Q9Y2G9 1366 aa25.81■■□□□ 1.72
ERCC2-203ENST00000391944 PELP1Q8IZL8 1130 aaKnown RBP25.8■■□□□ 1.72
ERCC2-203ENST00000391944 MYOM1P52179 1685 aa25.8■■□□□ 1.72
ERCC2-203ENST00000391944 ERVK-7P63135 1459 aa25.8■■□□□ 1.72
ERCC2-203ENST00000391944 AGLP35573 1532 aa25.79■■□□□ 1.72
ERCC2-203ENST00000391944 PREX1Q8TCU6 1659 aa25.79■■□□□ 1.72
ERCC2-203ENST00000391944 VGFO15240 615 aaPredicted RBP25.79■■□□□ 1.72
ERCC2-203ENST00000391944 BCANQ96GW7 911 aa25.79■■□□□ 1.72
ERCC2-203ENST00000391944 KNSTRNQ9Y448 316 aa25.79■■□□□ 1.72
ERCC2-203ENST00000391944 NEXMIFQ5QGS0 1516 aa25.79■■□□□ 1.72
ERCC2-203ENST00000391944 ADGRB1O14514 1584 aa25.79■■□□□ 1.72
ERCC2-203ENST00000391944 PPP6R1Q9UPN7 881 aa25.77■■□□□ 1.72
ERCC2-203ENST00000391944 KIF13AQ9H1H9 1805 aa25.76■■□□□ 1.71
ERCC2-203ENST00000391944 CENPJQ9HC77 1338 aaPredicted RBP25.76■■□□□ 1.71
ERCC2-203ENST00000391944 AMER1Q5JTC6 1135 aaPredicted RBP25.75■■□□□ 1.71
ERCC2-203ENST00000391944 SMG6Q86US8 1419 aaKnown RBP25.74■■□□□ 1.71
ERCC2-203ENST00000391944 ZFYVE9O95405 1425 aa25.74■■□□□ 1.71
ERCC2-203ENST00000391944 TRAK1Q9UPV9 953 aa25.72■■□□□ 1.71
ERCC2-203ENST00000391944 ASXL1Q8IXJ9 1541 aa25.72■■□□□ 1.71
ERCC2-203ENST00000391944 NPC1L1Q9UHC9 1359 aa25.72■■□□□ 1.71
ERCC2-203ENST00000391944 TMEM131LA2VDJ0 1609 aa25.71■■□□□ 1.71
ERCC2-203ENST00000391944 TMEM132EQ6IEE7 984 aa25.71■■□□□ 1.71
ERCC2-203ENST00000391944 INSRP06213 1382 aa25.69■■□□□ 1.7
ERCC2-203ENST00000391944 MYO5BQ9ULV0 1848 aa25.68■■□□□ 1.7
ERCC2-203ENST00000391944 NUTM2DQ5VT03 806 aaPredicted RBP25.68■■□□□ 1.7
ERCC2-203ENST00000391944 FBXO31Q5XUX0 539 aaPredicted RBP25.68■■□□□ 1.7
ERCC2-203ENST00000391944 NUDCQ9Y266 331 aa25.68■■□□□ 1.7
ERCC2-203ENST00000391944 QRICH2Q9H0J4 1663 aa25.67■■□□□ 1.7
ERCC2-203ENST00000391944 ERICH6BQ5W0A0 696 aa25.67■■□□□ 1.7
ERCC2-203ENST00000391944 PPP2R1AP30153 589 aa25.65■■□□□ 1.7
ERCC2-203ENST00000391944 CLTCQ00610 1675 aaKnown RBP25.63■■□□□ 1.69
ERCC2-203ENST00000391944 ARHGEF40Q8TER5 1519 aa25.63■■□□□ 1.69
ERCC2-203ENST00000391944 IRX6P78412 446 aaPredicted RBP25.62■■□□□ 1.69
ERCC2-203ENST00000391944 ARHGEF28Q8N1W1 1705 aaKnown RBP25.6■■□□□ 1.69
ERCC2-203ENST00000391944 CARD14Q9BXL6 1004 aa25.6■■□□□ 1.69
ERCC2-203ENST00000391944 SENP3-EIF4A1A0A087X0R7 540 aa25.6■■□□□ 1.69
ERCC2-203ENST00000391944 BLMP54132 1417 aaPredicted RBP25.59■■□□□ 1.69
ERCC2-203ENST00000391944 PUS7Q96PZ0 661 aaKnown RBP25.58■■□□□ 1.68
ERCC2-203ENST00000391944 SPATA31D1Q6ZQQ2 1576 aa25.57■■□□□ 1.68
ERCC2-203ENST00000391944 MLECQ14165 292 aa25.54■■□□□ 1.68
ERCC2-203ENST00000391944 RNF123Q5XPI4 1314 aa25.54■■□□□ 1.68
ERCC2-203ENST00000391944 PDE3BQ13370 1112 aa25.54■■□□□ 1.68
ERCC2-203ENST00000391944 STAG3Q9UJ98 1225 aa25.53■■□□□ 1.68
ERCC2-203ENST00000391944 EVC2Q86UK5 1308 aa25.53■■□□□ 1.68
ERCC2-203ENST00000391944 SLC12A5Q9H2X9 1139 aa25.51■■□□□ 1.67
ERCC2-203ENST00000391944 ADAMTS8Q9UP79 889 aa25.51■■□□□ 1.67
ERCC2-203ENST00000391944 TULP4Q9NRJ4 1543 aa25.5■■□□□ 1.67
ERCC2-203ENST00000391944 PPP4R2Q9NY27 417 aa25.5■■□□□ 1.67
ERCC2-203ENST00000391944 A2ML1A8K2U0 1454 aa25.49■■□□□ 1.67
ERCC2-203ENST00000391944 WDR43Q15061 677 aaKnown RBP eCLIP25.48■■□□□ 1.674e-9■■■■■ 77.9
ERCC2-203ENST00000391944 SALL2Q9Y467 1007 aaPredicted RBP25.48■■□□□ 1.67
ERCC2-203ENST00000391944 STK26Q9P289 416 aa25.47■■□□□ 1.67
ERCC2-203ENST00000391944 ALKQ9UM73 1620 aa25.47■■□□□ 1.67
ERCC2-203ENST00000391944 NSD3Q9BZ95 1437 aa25.47■■□□□ 1.67
ERCC2-203ENST00000391944 YTHDC2Q9H6S0 1430 aaKnown RBP25.46■■□□□ 1.67
ERCC2-203ENST00000391944 ESF1Q9H501 851 aaKnown RBP25.46■■□□□ 1.67
ERCC2-203ENST00000391944 ZMYM3Q14202 1370 aa25.46■■□□□ 1.67
ERCC2-203ENST00000391944 PTPRMP28827 1452 aa25.46■■□□□ 1.67
ERCC2-203ENST00000391944 TSHZ2Q9NRE2 1034 aa25.45■■□□□ 1.66
ERCC2-203ENST00000391944 SENP3Q9H4L4 574 aaPredicted RBP25.43■■□□□ 1.66
ERCC2-203ENST00000391944 USP32Q8NFA0 1604 aa25.43■■□□□ 1.66
ERCC2-203ENST00000391944 RIMS2Q9UQ26 1411 aa25.42■■□□□ 1.66
ERCC2-203ENST00000391944 SAFB2Q14151 953 aaKnown RBP eCLIP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms