RNA–Protein interactions for RNA: ENST00000391310.1

RNU6-1239P-201, Transcript of RNA, U6 small nuclear 1239, pseudogene, humanhuman

BASIC

Gene RNU6-1239P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1239P-201ENST00000391310 LIAT1Q6ZQX7 453 aa4.22□□□□□ -1.73
RNU6-1239P-201ENST00000391310 SLF2Q8IX21 1173 aa4.22□□□□□ -1.73
RNU6-1239P-201ENST00000391310 PRR14Q9BWN1 585 aa4.22□□□□□ -1.73
RNU6-1239P-201ENST00000391310 C11orf95C9JLR9 678 aaPredicted RBP4.21□□□□□ -1.74
RNU6-1239P-201ENST00000391310 LMOD2Q6P5Q4 547 aa4.21□□□□□ -1.74
RNU6-1239P-201ENST00000391310 DACH1Q9UI36 760 aa4.21□□□□□ -1.74
RNU6-1239P-201ENST00000391310 AVPP01185 164 aa4.2□□□□□ -1.74
RNU6-1239P-201ENST00000391310 NUDT18Q6ZVK8 323 aa4.2□□□□□ -1.74
RNU6-1239P-201ENST00000391310 RBM27Q9P2N5 1060 aaKnown RBP4.2□□□□□ -1.74
RNU6-1239P-201ENST00000391310 GMPR2Q9P2T1 348 aaKnown RBP4.2□□□□□ -1.74
RNU6-1239P-201ENST00000391310 PCDHB3Q9Y5E6 796 aa4.2□□□□□ -1.74
RNU6-1239P-201ENST00000391310 SLC4A3P48751 1232 aa4.19□□□□□ -1.74
RNU6-1239P-201ENST00000391310 CTC1Q2NKJ3 1217 aa4.19□□□□□ -1.74
RNU6-1239P-201ENST00000391310 SWT1Q5T5J6 900 aaKnown RBP4.19□□□□□ -1.74
RNU6-1239P-201ENST00000391310 LCE2CQ5TA81 110 aa4.19□□□□□ -1.74
RNU6-1239P-201ENST00000391310 FAM181BA6NEQ2 426 aa4.18□□□□□ -1.74
RNU6-1239P-201ENST00000391310 PPEF1O14829 653 aaPredicted RBP4.18□□□□□ -1.74
RNU6-1239P-201ENST00000391310 AXIN1O15169 862 aa4.18□□□□□ -1.74
RNU6-1239P-201ENST00000391310 TLL1O43897 1013 aa4.18□□□□□ -1.74
RNU6-1239P-201ENST00000391310 S1PR4O95977 384 aa4.18□□□□□ -1.74
RNU6-1239P-201ENST00000391310 PDIA6Q15084 440 aa4.18□□□□□ -1.74
RNU6-1239P-201ENST00000391310 BLOC1S3Q6QNY0 202 aa4.18□□□□□ -1.74
RNU6-1239P-201ENST00000391310 PKD2L1Q9P0L9 805 aa4.18□□□□□ -1.74
RNU6-1239P-201ENST00000391310 SMCPP49901 116 aaPredicted RBP4.17□□□□□ -1.74
RNU6-1239P-201ENST00000391310 CADPS2Q86UW7 1296 aa4.17□□□□□ -1.74
RNU6-1239P-201ENST00000391310 TTC13Q8NBP0 860 aa4.17□□□□□ -1.74
RNU6-1239P-201ENST00000391310 SPDYE16A6NNV3 312 aaPredicted RBP4.16□□□□□ -1.74
RNU6-1239P-201ENST00000391310 TERTO14746 1132 aaKnown RBP4.16□□□□□ -1.74
RNU6-1239P-201ENST00000391310 PRIM1P49642 420 aaKnown RBP4.16□□□□□ -1.74
RNU6-1239P-201ENST00000391310 PLA2G2CQ5R387 149 aa4.16□□□□□ -1.74
RNU6-1239P-201ENST00000391310 TOR4AQ9NXH8 423 aa4.16□□□□□ -1.74
RNU6-1239P-201ENST00000391310 ADH1BP00325 375 aa4.15□□□□□ -1.75
RNU6-1239P-201ENST00000391310 FOXC1Q12948 553 aa4.15□□□□□ -1.75
RNU6-1239P-201ENST00000391310 SUZ12Q15022 739 aaKnown RBP4.15□□□□□ -1.75
RNU6-1239P-201ENST00000391310 SNRPBP14678 240 aaKnown RBP4.13□□□□□ -1.75
RNU6-1239P-201ENST00000391310 CYP4X1Q8N118 509 aa4.13□□□□□ -1.75
RNU6-1239P-201ENST00000391310 TRIM47Q96LD4 638 aa4.13□□□□□ -1.75
RNU6-1239P-201ENST00000391310 EYA1Q99502 592 aa4.13□□□□□ -1.75
RNU6-1239P-201ENST00000391310 ACTN4O43707 911 aaKnown RBP4.12□□□□□ -1.75
RNU6-1239P-201ENST00000391310 RPIAP49247 311 aa4.12□□□□□ -1.75
RNU6-1239P-201ENST00000391310 SLC6A16Q9GZN6 736 aa4.12□□□□□ -1.75
RNU6-1239P-201ENST00000391310 CDHR5Q9HBB8 845 aa4.12□□□□□ -1.75
RNU6-1239P-201ENST00000391310 SENP2Q9HC62 589 aa4.12□□□□□ -1.75
RNU6-1239P-201ENST00000391310 ATP13A2Q9NQ11 1180 aa4.12□□□□□ -1.75
RNU6-1239P-201ENST00000391310 NR1I2O75469 434 aa4.11□□□□□ -1.75
RNU6-1239P-201ENST00000391310 LORP23490 312 aaPredicted RBP4.11□□□□□ -1.75
RNU6-1239P-201ENST00000391310 PADI6Q6TGC4 694 aa4.11□□□□□ -1.75
RNU6-1239P-201ENST00000391310 ZSCAN1Q8NBB4 408 aa4.11□□□□□ -1.75
RNU6-1239P-201ENST00000391310 GRXCR2A6NFK2 248 aa4.1□□□□□ -1.75
RNU6-1239P-201ENST00000391310 CD2BP2O95400 341 aaKnown RBP4.1□□□□□ -1.75
RNU6-1239P-201ENST00000391310 OSBPP22059 807 aa4.1□□□□□ -1.75
RNU6-1239P-201ENST00000391310 KMT5BQ4FZB7 885 aa4.1□□□□□ -1.75
RNU6-1239P-201ENST00000391310 NPDC1Q9NQX5 325 aaPredicted RBP4.1□□□□□ -1.75
RNU6-1239P-201ENST00000391310 SLC16A10Q8TF71 515 aa4.09□□□□□ -1.75
RNU6-1239P-201ENST00000391310 KIFC2Q96AC6 838 aa4.09□□□□□ -1.75
RNU6-1239P-201ENST00000391310 TTC24A2A3L6 582 aaPredicted RBP4.08□□□□□ -1.76
RNU6-1239P-201ENST00000391310 CFHP08603 1231 aa4.08□□□□□ -1.76
RNU6-1239P-201ENST00000391310 GMPRP36959 345 aa4.08□□□□□ -1.76
RNU6-1239P-201ENST00000391310 TMEM134Q9H6X4 195 aa4.08□□□□□ -1.76
RNU6-1239P-201ENST00000391310 ARIH1Q9Y4X5 557 aaPredicted RBP4.08□□□□□ -1.76
RNU6-1239P-201ENST00000391310 SMPD1P17405 629 aa4.07□□□□□ -1.76
RNU6-1239P-201ENST00000391310 DNAJB2P25686 324 aa4.07□□□□□ -1.76
RNU6-1239P-201ENST00000391310 SCUBE3Q8IX30 993 aa4.07□□□□□ -1.76
RNU6-1239P-201ENST00000391310 NPAS3Q8IXF0 933 aa4.07□□□□□ -1.76
RNU6-1239P-201ENST00000391310 SNIP1Q8TAD8 396 aaKnown RBP4.06□□□□□ -1.76
RNU6-1239P-201ENST00000391310 IRF7Q92985 503 aa4.06□□□□□ -1.76
RNU6-1239P-201ENST00000391310 SPSB2Q99619 263 aa4.06□□□□□ -1.76
RNU6-1239P-201ENST00000391310 NXF1Q9UBU9 619 aaKnown RBP4.06□□□□□ -1.76
RNU6-1239P-201ENST00000391310 WNT7AO00755 349 aa4.05□□□□□ -1.76
RNU6-1239P-201ENST00000391310 FCF1Q9Y324 198 aaKnown RBP4.05□□□□□ -1.76
RNU6-1239P-201ENST00000391310 RBM46Q8TBY0 533 aaKnown RBP4.04□□□□□ -1.76
RNU6-1239P-201ENST00000391310 SLC10A3P09131 477 aa4.03□□□□□ -1.76
RNU6-1239P-201ENST00000391310 RCCD1A6NED2 376 aa4.02□□□□□ -1.77
RNU6-1239P-201ENST00000391310 H3BM21 787 aa4.02□□□□□ -1.77
RNU6-1239P-201ENST00000391310 J3QL48 77 aa4.02□□□□□ -1.77
RNU6-1239P-201ENST00000391310 KCNMA1Q12791 1236 aa4.02□□□□□ -1.77
RNU6-1239P-201ENST00000391310 E2F4Q16254 413 aa4.02□□□□□ -1.77
RNU6-1239P-201ENST00000391310 ADGRG1Q9Y653 693 aa4.02□□□□□ -1.77
RNU6-1239P-201ENST00000391310 ZBTB24O43167 697 aaPredicted RBP4.01□□□□□ -1.77
RNU6-1239P-201ENST00000391310 GSK3AP49840 483 aa4.01□□□□□ -1.77
RNU6-1239P-201ENST00000391310 KCTD17Q8N5Z5 321 aa4.01□□□□□ -1.77
RNU6-1239P-201ENST00000391310 HPS1Q92902 700 aa4.01□□□□□ -1.77
RNU6-1239P-201ENST00000391310 THAP11Q96EK4 314 aa4.01□□□□□ -1.77
RNU6-1239P-201ENST00000391310 ERBB4Q15303 1308 aa4□□□□□ -1.77
RNU6-1239P-201ENST00000391310 PUS10Q3MIT2 529 aaKnown RBP4□□□□□ -1.77
RNU6-1239P-201ENST00000391310 FAM160A2Q8N612 972 aaPredicted RBP4□□□□□ -1.77
RNU6-1239P-201ENST00000391310 MRGPRX2Q96LB1 330 aa4□□□□□ -1.77
RNU6-1239P-201ENST00000391310 TRIM32Q13049 653 aa3.99□□□□□ -1.77
RNU6-1239P-201ENST00000391310 RSPH4AQ5TD94 716 aa3.99□□□□□ -1.77
RNU6-1239P-201ENST00000391310 REPIN1Q9BWE0 567 aaKnown RBP3.99□□□□□ -1.77
RNU6-1239P-201ENST00000391310 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.98□□□□□ -1.77
RNU6-1239P-201ENST00000391310 PTGDRQ13258 359 aa3.98□□□□□ -1.77
RNU6-1239P-201ENST00000391310 MORN1Q5T089 497 aa3.98□□□□□ -1.77
RNU6-1239P-201ENST00000391310 SALL2Q9Y467 1007 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1239P-201ENST00000391310 FMNL1O95466 1100 aaPredicted RBP3.97□□□□□ -1.77
RNU6-1239P-201ENST00000391310 VEGFBP49765 207 aa3.97□□□□□ -1.77
RNU6-1239P-201ENST00000391310 TMEM151AQ8N4L1 468 aa3.97□□□□□ -1.77
RNU6-1239P-201ENST00000391310 GDF11O95390 407 aa3.96□□□□□ -1.78
RNU6-1239P-201ENST00000391310 VSIG8P0DPA2 414 aa3.96□□□□□ -1.78
RNU6-1239P-201ENST00000391310 MSS51Q4VC12 460 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms