RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 GAPVD1Q14C86 1478 aa18.36■□□□□ 0.53
LRRK1-201ENST00000388948 DIAPH1O60610 1272 aaKnown RBP18.36■□□□□ 0.53
LRRK1-201ENST00000388948 FAM184AQ8NB25 1140 aa18.36■□□□□ 0.53
LRRK1-201ENST00000388948 TXNDC2Q86VQ3 553 aa18.34■□□□□ 0.53
LRRK1-201ENST00000388948 TPD52L1Q16890 204 aaPredicted RBP18.34■□□□□ 0.53
LRRK1-201ENST00000388948 PHLDB1Q86UU1 1377 aa18.34■□□□□ 0.53
LRRK1-201ENST00000388948 A0A0U1RQG5 324 aaPredicted RBP18.34■□□□□ 0.53
LRRK1-201ENST00000388948 NLRP6P59044 892 aa18.34■□□□□ 0.53
LRRK1-201ENST00000388948 GPRASP1Q5JY77 1395 aa18.34■□□□□ 0.53
LRRK1-201ENST00000388948 FOXD4L1Q9NU39 408 aa18.34■□□□□ 0.53
LRRK1-201ENST00000388948 KIF15Q9NS87 1388 aa18.33■□□□□ 0.53
LRRK1-201ENST00000388948 PTMSP20962 102 aa18.33■□□□□ 0.53
LRRK1-201ENST00000388948 DIAPH3Q9NSV4 1193 aa18.33■□□□□ 0.53
LRRK1-201ENST00000388948 ST18O60284 1047 aa18.33■□□□□ 0.52
LRRK1-201ENST00000388948 DHX57Q6P158 1386 aaKnown RBP18.33■□□□□ 0.52
LRRK1-201ENST00000388948 ANKRD45Q5TZF3 282 aa18.33■□□□□ 0.52
LRRK1-201ENST00000388948 GZF1Q9H116 711 aaPredicted RBP18.32■□□□□ 0.52
LRRK1-201ENST00000388948 CPLX2Q6PUV4 134 aaKnown RBP18.32■□□□□ 0.52
LRRK1-201ENST00000388948 CCDC43Q96MW1 224 aaKnown RBP18.32■□□□□ 0.52
LRRK1-201ENST00000388948 AIMP1Q12904 312 aaKnown RBP18.32■□□□□ 0.52
LRRK1-201ENST00000388948 ABTB2Q8N961 1025 aa18.32■□□□□ 0.52
LRRK1-201ENST00000388948 IFIT2P09913 472 aaKnown RBP18.32■□□□□ 0.52
LRRK1-201ENST00000388948 FKBP5Q13451 457 aaPredicted RBP18.32■□□□□ 0.52
LRRK1-201ENST00000388948 FAM177BA6PVY3 158 aa18.31■□□□□ 0.52
LRRK1-201ENST00000388948 RIC3Q7Z5B4 369 aa18.31■□□□□ 0.52
LRRK1-201ENST00000388948 TCERG1O14776 1098 aaKnown RBP18.31■□□□□ 0.52
LRRK1-201ENST00000388948 CCAR1Q8IX12 1150 aaKnown RBP18.3■□□□□ 0.52
LRRK1-201ENST00000388948 G3BP1Q13283 466 aaKnown RBP eCLIP18.3■□□□□ 0.52
LRRK1-201ENST00000388948 FOXD4L5Q5VV16 416 aaPredicted RBP18.3■□□□□ 0.52
LRRK1-201ENST00000388948 FOXD4L4Q8WXT5 416 aaPredicted RBP18.3■□□□□ 0.52
LRRK1-201ENST00000388948 CHMP4CQ96CF2 233 aa18.3■□□□□ 0.52
LRRK1-201ENST00000388948 TSPYL4Q9UJ04 414 aa18.29■□□□□ 0.52
LRRK1-201ENST00000388948 TRDNQ13061 729 aa18.29■□□□□ 0.52
LRRK1-201ENST00000388948 CCDC27Q2M243 656 aa18.29■□□□□ 0.52
LRRK1-201ENST00000388948 FYB1O15117 783 aa18.28■□□□□ 0.52
LRRK1-201ENST00000388948 RIPK4P57078 832 aa18.28■□□□□ 0.52
LRRK1-201ENST00000388948 TRIM29Q14134 588 aa18.28■□□□□ 0.52
LRRK1-201ENST00000388948 RBM42Q9BTD8 480 aaKnown RBP18.28■□□□□ 0.52
LRRK1-201ENST00000388948 PLIN1O60240 522 aa18.28■□□□□ 0.52
LRRK1-201ENST00000388948 MCTP1Q6DN14 999 aa18.28■□□□□ 0.52
LRRK1-201ENST00000388948 MYBBP1AQ9BQG0 1328 aaKnown RBP18.27■□□□□ 0.52
LRRK1-201ENST00000388948 HMOX1P09601 288 aa18.27■□□□□ 0.52
LRRK1-201ENST00000388948 RTN4Q9NQC3 1192 aaKnown RBP18.27■□□□□ 0.52
LRRK1-201ENST00000388948 ERICH2A1L162 156 aa18.26■□□□□ 0.51
LRRK1-201ENST00000388948 ZKSCAN2Q63HK3 967 aa18.26■□□□□ 0.51
LRRK1-201ENST00000388948 SMARCA4P51532 1647 aa18.26■□□□□ 0.51
LRRK1-201ENST00000388948 TPM3P06753 285 aa18.26■□□□□ 0.51
LRRK1-201ENST00000388948 RUFY2Q8WXA3 655 aa18.26■□□□□ 0.51
LRRK1-201ENST00000388948 PDE3BQ13370 1112 aa18.25■□□□□ 0.51
LRRK1-201ENST00000388948 THEMISQ8N1K5 641 aaPredicted RBP18.25■□□□□ 0.51
LRRK1-201ENST00000388948 NFXL1Q6ZNB6 911 aa18.25■□□□□ 0.51
LRRK1-201ENST00000388948 TSR1Q2NL82 804 aaKnown RBP18.25■□□□□ 0.51
LRRK1-201ENST00000388948 MIA2Q96PC5 1412 aa18.24■□□□□ 0.51
LRRK1-201ENST00000388948 CPLX1O14810 134 aa18.24■□□□□ 0.51
LRRK1-201ENST00000388948 NEUROD6Q96NK8 337 aa18.24■□□□□ 0.51
LRRK1-201ENST00000388948 AQRO60306 1485 aaKnown RBP eCLIP18.24■□□□□ 0.51
LRRK1-201ENST00000388948 TPM2P07951 284 aa18.24■□□□□ 0.51
LRRK1-201ENST00000388948 IKQ13123 557 aaPredicted RBP18.24■□□□□ 0.51
LRRK1-201ENST00000388948 TMEM132EQ6IEE7 984 aa18.23■□□□□ 0.51
LRRK1-201ENST00000388948 CABP2Q9NPB3 220 aa18.23■□□□□ 0.51
LRRK1-201ENST00000388948 RAD54L2Q9Y4B4 1467 aa18.23■□□□□ 0.51
LRRK1-201ENST00000388948 E9PSI1 815 aa18.23■□□□□ 0.51
LRRK1-201ENST00000388948 ARHGAP5Q13017 1502 aa18.22■□□□□ 0.51
LRRK1-201ENST00000388948 KIF6Q6ZMV9 814 aa18.22■□□□□ 0.51
LRRK1-201ENST00000388948 FGD5Q6ZNL6 1462 aa18.22■□□□□ 0.51
LRRK1-201ENST00000388948 ZKSCAN1P17029 563 aaPredicted RBP18.21■□□□□ 0.51
LRRK1-201ENST00000388948 USP47Q96K76 1375 aa18.21■□□□□ 0.51
LRRK1-201ENST00000388948 TOM1L2Q6ZVM7 507 aa18.21■□□□□ 0.5
LRRK1-201ENST00000388948 AFAP1Q8N556 730 aa18.2■□□□□ 0.5
LRRK1-201ENST00000388948 APAF1O14727 1248 aa18.2■□□□□ 0.5
LRRK1-201ENST00000388948 GGNBP2Q9H3C7 697 aa18.2■□□□□ 0.5
LRRK1-201ENST00000388948 MTMR7Q9Y216 660 aa18.2■□□□□ 0.5
LRRK1-201ENST00000388948 FOXD4L6Q3SYB3 417 aaPredicted RBP18.2■□□□□ 0.5
LRRK1-201ENST00000388948 FOXD4L3Q6VB84 417 aaPredicted RBP18.2■□□□□ 0.5
LRRK1-201ENST00000388948 DDX54Q8TDD1 881 aaKnown RBP18.18■□□□□ 0.5
LRRK1-201ENST00000388948 CCDC47Q96A33 483 aaKnown RBP18.18■□□□□ 0.5
LRRK1-201ENST00000388948 SLC4A3P48751 1232 aa18.18■□□□□ 0.5
LRRK1-201ENST00000388948 ANO2Q9NQ90 1003 aa18.18■□□□□ 0.5
LRRK1-201ENST00000388948 WASHC4Q2M389 1173 aa18.18■□□□□ 0.5
LRRK1-201ENST00000388948 API5Q9BZZ5 524 aaKnown RBP18.18■□□□□ 0.5
LRRK1-201ENST00000388948 R3HCC1Q9Y3T6 440 aaKnown RBP18.18■□□□□ 0.5
LRRK1-201ENST00000388948 MYOM3Q5VTT5 1437 aa18.18■□□□□ 0.5
LRRK1-201ENST00000388948 ANKLE2Q86XL3 938 aa18.18■□□□□ 0.5
LRRK1-201ENST00000388948 PHF14O94880 888 aa18.17■□□□□ 0.5
LRRK1-201ENST00000388948 PCMTD1Q96MG8 357 aaPredicted RBP18.16■□□□□ 0.5
LRRK1-201ENST00000388948 ZNF644Q9H582 1327 aaPredicted RBP18.16■□□□□ 0.5
LRRK1-201ENST00000388948 ROCK1Q13464 1354 aa18.16■□□□□ 0.5
LRRK1-201ENST00000388948 TATP17735 454 aaPredicted RBP18.16■□□□□ 0.5
LRRK1-201ENST00000388948 SMG6Q86US8 1419 aaKnown RBP18.15■□□□□ 0.5
LRRK1-201ENST00000388948 PLEKHO1Q53GL0 409 aaPredicted RBP18.15■□□□□ 0.5
LRRK1-201ENST00000388948 RNF20Q5VTR2 975 aa18.15■□□□□ 0.5
LRRK1-201ENST00000388948 GNAI1P63096 354 aa18.14■□□□□ 0.49
LRRK1-201ENST00000388948 COG6Q9Y2V7 657 aa18.14■□□□□ 0.49
LRRK1-201ENST00000388948 TPM1P09493 284 aa18.14■□□□□ 0.49
LRRK1-201ENST00000388948 ATP6V1DQ9Y5K8 247 aa18.14■□□□□ 0.49
LRRK1-201ENST00000388948 RALYLQ86SE5 291 aaKnown RBP18.13■□□□□ 0.49
LRRK1-201ENST00000388948 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.13■□□□□ 0.49
LRRK1-201ENST00000388948 HSP90AB4PQ58FF6 505 aa18.13■□□□□ 0.49
LRRK1-201ENST00000388948 DDX19BQ9UMR2 479 aa18.12■□□□□ 0.49
LRRK1-201ENST00000388948 PRDM11Q9NQV5 511 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms