RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 MROH2AA6NES4 1674 aa18.73■□□□□ 0.59
SEC13-203ENST00000383801 PREX1Q8TCU6 1659 aa18.73■□□□□ 0.59
SEC13-203ENST00000383801 SETBP1Q9Y6X0 1596 aa18.73■□□□□ 0.59
SEC13-203ENST00000383801 ZFYVE9O95405 1425 aa18.72■□□□□ 0.59
SEC13-203ENST00000383801 CFAP65Q6ZU64 1925 aaKnown RBP18.72■□□□□ 0.59
SEC13-203ENST00000383801 VGFO15240 615 aaPredicted RBP18.71■□□□□ 0.59
SEC13-203ENST00000383801 TMF1P82094 1093 aa18.71■□□□□ 0.59
SEC13-203ENST00000383801 CDCA8Q53HL2 280 aa18.71■□□□□ 0.59
SEC13-203ENST00000383801 KTN1Q86UP2 1357 aaKnown RBP18.71■□□□□ 0.59
SEC13-203ENST00000383801 TESK2Q96S53 571 aa18.71■□□□□ 0.59
SEC13-203ENST00000383801 YTHDC1Q96MU7 727 aaKnown RBP18.7■□□□□ 0.58
SEC13-203ENST00000383801 PRKRIP1Q9H875 184 aaPredicted RBP18.7■□□□□ 0.58
SEC13-203ENST00000383801 IDI1Q13907 227 aa18.68■□□□□ 0.58
SEC13-203ENST00000383801 PIK3C2GO75747 1445 aa18.68■□□□□ 0.58
SEC13-203ENST00000383801 ADGRF5Q8IZF2 1346 aa18.67■□□□□ 0.58
SEC13-203ENST00000383801 ERVK-7P63135 1459 aa18.67■□□□□ 0.58
SEC13-203ENST00000383801 C14orf93Q9H972 538 aaKnown RBP18.67■□□□□ 0.58
SEC13-203ENST00000383801 CHGAP10645 457 aaKnown RBP18.66■□□□□ 0.58
SEC13-203ENST00000383801 SPATA31D1Q6ZQQ2 1576 aa18.66■□□□□ 0.58
SEC13-203ENST00000383801 NEXMIFQ5QGS0 1516 aa18.65■□□□□ 0.58
SEC13-203ENST00000383801 SBNO2Q9Y2G9 1366 aa18.64■□□□□ 0.58
SEC13-203ENST00000383801 CLTCQ00610 1675 aaKnown RBP18.64■□□□□ 0.57
SEC13-203ENST00000383801 TMEM131LA2VDJ0 1609 aa18.64■□□□□ 0.57
SEC13-203ENST00000383801 ESF1Q9H501 851 aaKnown RBP18.64■□□□□ 0.57
SEC13-203ENST00000383801 CFAP70Q5T0N1 1121 aa18.63■□□□□ 0.57
SEC13-203ENST00000383801 MYO3AQ8NEV4 1616 aa18.62■□□□□ 0.57
SEC13-203ENST00000383801 RALBP1Q15311 655 aa18.59■□□□□ 0.57
SEC13-203ENST00000383801 POLR3GLQ9BT43 218 aa18.58■□□□□ 0.57
SEC13-203ENST00000383801 ZMYM3Q14202 1370 aa18.58■□□□□ 0.56
SEC13-203ENST00000383801 DISP3Q9P2K9 1392 aa18.57■□□□□ 0.56
SEC13-203ENST00000383801 ADGRB1O14514 1584 aa18.57■□□□□ 0.56
SEC13-203ENST00000383801 KDM5AP29375 1690 aaKnown RBP18.57■□□□□ 0.56
SEC13-203ENST00000383801 PUS7Q96PZ0 661 aaKnown RBP18.57■□□□□ 0.56
SEC13-203ENST00000383801 FBXO31Q5XUX0 539 aaPredicted RBP18.56■□□□□ 0.56
SEC13-203ENST00000383801 PER1O15534 1290 aaPredicted RBP18.55■□□□□ 0.56
SEC13-203ENST00000383801 HDGFP51858 240 aaKnown RBP18.54■□□□□ 0.56
SEC13-203ENST00000383801 STAG3Q9UJ98 1225 aa18.52■□□□□ 0.56
SEC13-203ENST00000383801 CENPJQ9HC77 1338 aaPredicted RBP18.52■□□□□ 0.56
SEC13-203ENST00000383801 MYO5BQ9ULV0 1848 aa18.52■□□□□ 0.56
SEC13-203ENST00000383801 TRHP20396 242 aaPredicted RBP18.52■□□□□ 0.55
SEC13-203ENST00000383801 MLECQ14165 292 aa18.52■□□□□ 0.55
SEC13-203ENST00000383801 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.52■□□□□ 0.55
SEC13-203ENST00000383801 A2ML1A8K2U0 1454 aa18.51■□□□□ 0.55
SEC13-203ENST00000383801 DNAJC5Q9H3Z4 198 aa18.51■□□□□ 0.55
SEC13-203ENST00000383801 MRS2Q9HD23 443 aa18.49■□□□□ 0.55
SEC13-203ENST00000383801 MYBBP1AQ9BQG0 1328 aaKnown RBP18.48■□□□□ 0.55
SEC13-203ENST00000383801 PANK3Q9H999 370 aa18.48■□□□□ 0.55
SEC13-203ENST00000383801 BRD4O60885 1362 aaPredicted RBP18.48■□□□□ 0.55
SEC13-203ENST00000383801 PARD3Q8TEW0 1356 aa18.48■□□□□ 0.55
SEC13-203ENST00000383801 NPC1L1Q9UHC9 1359 aa18.48■□□□□ 0.55
SEC13-203ENST00000383801 TNRQ92752 1358 aa18.47■□□□□ 0.55
SEC13-203ENST00000383801 NLRP1Q9C000 1473 aa18.45■□□□□ 0.54
SEC13-203ENST00000383801 SCAF1Q9H7N4 1312 aaKnown RBP18.44■□□□□ 0.54
SEC13-203ENST00000383801 RIMS2Q9UQ26 1411 aa18.44■□□□□ 0.54
SEC13-203ENST00000383801 TRAK1Q9UPV9 953 aa18.44■□□□□ 0.54
SEC13-203ENST00000383801 KNSTRNQ9Y448 316 aa18.44■□□□□ 0.54
SEC13-203ENST00000383801 QRICH2Q9H0J4 1663 aa18.44■□□□□ 0.54
SEC13-203ENST00000383801 ARHGEF28Q8N1W1 1705 aaKnown RBP18.43■□□□□ 0.54
SEC13-203ENST00000383801 ALKQ9UM73 1620 aa18.43■□□□□ 0.54
SEC13-203ENST00000383801 NLRP13Q86W25 1043 aa18.42■□□□□ 0.54
SEC13-203ENST00000383801 TMEM132EQ6IEE7 984 aa18.41■□□□□ 0.54
SEC13-203ENST00000383801 TMC1Q8TDI8 760 aa18.41■□□□□ 0.54
SEC13-203ENST00000383801 GTF3C3Q9Y5Q9 886 aa18.41■□□□□ 0.54
SEC13-203ENST00000383801 MYOM1P52179 1685 aa18.41■□□□□ 0.54
SEC13-203ENST00000383801 EVC2Q86UK5 1308 aa18.41■□□□□ 0.54
SEC13-203ENST00000383801 INSRP06213 1382 aa18.4■□□□□ 0.54
SEC13-203ENST00000383801 CCDC184Q52MB2 194 aa18.39■□□□□ 0.54
SEC13-203ENST00000383801 DLC1Q96QB1 1528 aa18.39■□□□□ 0.53
SEC13-203ENST00000383801 YTHDC2Q9H6S0 1430 aaKnown RBP18.39■□□□□ 0.53
SEC13-203ENST00000383801 NINLQ9Y2I6 1382 aa18.39■□□□□ 0.53
SEC13-203ENST00000383801 ASXL1Q8IXJ9 1541 aa18.39■□□□□ 0.53
SEC13-203ENST00000383801 NUTM2DQ5VT03 806 aaPredicted RBP18.38■□□□□ 0.53
SEC13-203ENST00000383801 PNISRQ8TF01 805 aaKnown RBP18.38■□□□□ 0.53
SEC13-203ENST00000383801 SIRT1Q96EB6 747 aa18.38■□□□□ 0.53
SEC13-203ENST00000383801 UBR1Q8IWV7 1749 aa18.38■□□□□ 0.53
SEC13-203ENST00000383801 HNRNPUQ00839 825 aaKnown RBP eCLIP18.37■□□□□ 0.53
SEC13-203ENST00000383801 FER1L4A9Z1Z3 1794 aa18.37■□□□□ 0.53
SEC13-203ENST00000383801 TMEM2Q9UHN6 1383 aa18.36■□□□□ 0.53
SEC13-203ENST00000383801 AMER1Q5JTC6 1135 aaPredicted RBP18.36■□□□□ 0.53
SEC13-203ENST00000383801 ABCC11Q96J66 1382 aa18.36■□□□□ 0.53
SEC13-203ENST00000383801 FAM9BQ8IZU0 186 aa18.35■□□□□ 0.53
SEC13-203ENST00000383801 C3P01024 1663 aa18.35■□□□□ 0.53
SEC13-203ENST00000383801 LRPPRCP42704 1394 aaKnown RBP18.35■□□□□ 0.53
SEC13-203ENST00000383801 PTPRMP28827 1452 aa18.34■□□□□ 0.53
SEC13-203ENST00000383801 ZBED9Q6R2W3 1325 aa18.34■□□□□ 0.53
SEC13-203ENST00000383801 SETD1AO15047 1707 aaKnown RBP18.34■□□□□ 0.53
SEC13-203ENST00000383801 ATAD2Q6PL18 1390 aa18.31■□□□□ 0.52
SEC13-203ENST00000383801 CC2D1BQ5T0F9 858 aaKnown RBP18.3■□□□□ 0.52
SEC13-203ENST00000383801 POGKQ9P215 609 aa18.3■□□□□ 0.52
SEC13-203ENST00000383801 SLIT1O75093 1534 aa18.3■□□□□ 0.52
SEC13-203ENST00000383801 NRXN3Q9Y4C0 1643 aa18.3■□□□□ 0.52
SEC13-203ENST00000383801 USP32Q8NFA0 1604 aa18.29■□□□□ 0.52
SEC13-203ENST00000383801 TULP4Q9NRJ4 1543 aa18.29■□□□□ 0.52
SEC13-203ENST00000383801 PLEKHG1Q9ULL1 1385 aa18.29■□□□□ 0.52
SEC13-203ENST00000383801 THEMISQ8N1K5 641 aaPredicted RBP18.29■□□□□ 0.52
SEC13-203ENST00000383801 KNDC1Q76NI1 1749 aa18.29■□□□□ 0.52
SEC13-203ENST00000383801 TECPR2O15040 1411 aa18.28■□□□□ 0.52
SEC13-203ENST00000383801 FAM135BQ49AJ0 1406 aa18.28■□□□□ 0.52
SEC13-203ENST00000383801 ARHGAP23Q9P227 1491 aa18.28■□□□□ 0.52
SEC13-203ENST00000383801 EID1Q9Y6B2 187 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms