RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 UNC13BO14795 1591 aa19.81■□□□□ 0.76
RPAIN-202ENST00000381208 HSPA1LP34931 641 aa19.78■□□□□ 0.76
RPAIN-202ENST00000381208 GCC2Q8IWJ2 1684 aa19.77■□□□□ 0.76
RPAIN-202ENST00000381208 KCNA6P17658 529 aa19.77■□□□□ 0.76
RPAIN-202ENST00000381208 NUP155O75694 1391 aa19.77■□□□□ 0.76
RPAIN-202ENST00000381208 ITGAEP38570 1179 aa19.76■□□□□ 0.75
RPAIN-202ENST00000381208 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.76■□□□□ 0.75
RPAIN-202ENST00000381208 STRCP1A6NGW2 1772 aa19.76■□□□□ 0.75
RPAIN-202ENST00000381208 PPP1R15AO75807 674 aaPredicted RBP19.74■□□□□ 0.75
RPAIN-202ENST00000381208 BCANQ96GW7 911 aa19.74■□□□□ 0.75
RPAIN-202ENST00000381208 IQGAP3Q86VI3 1631 aa19.74■□□□□ 0.75
RPAIN-202ENST00000381208 PLEKHG1Q9ULL1 1385 aa19.72■□□□□ 0.75
RPAIN-202ENST00000381208 PPARGC1BQ86YN6 1023 aaKnown RBP19.72■□□□□ 0.75
RPAIN-202ENST00000381208 SLC26A8Q96RN1 970 aa19.72■□□□□ 0.75
RPAIN-202ENST00000381208 ZFYVE9O95405 1425 aa19.72■□□□□ 0.75
RPAIN-202ENST00000381208 RIMS2Q9UQ26 1411 aa19.72■□□□□ 0.75
RPAIN-202ENST00000381208 RNF216Q9NWF9 866 aaPredicted RBP19.71■□□□□ 0.75
RPAIN-202ENST00000381208 RRBP1Q9P2E9 1410 aaKnown RBP19.71■□□□□ 0.75
RPAIN-202ENST00000381208 ALKQ9UM73 1620 aa19.71■□□□□ 0.75
RPAIN-202ENST00000381208 POTEHQ6S545 545 aa19.7■□□□□ 0.74
RPAIN-202ENST00000381208 ILDR2Q71H61 639 aa19.7■□□□□ 0.74
RPAIN-202ENST00000381208 CHGAP10645 457 aaKnown RBP19.7■□□□□ 0.74
RPAIN-202ENST00000381208 NKTRP30414 1462 aaKnown RBP19.69■□□□□ 0.74
RPAIN-202ENST00000381208 TMEM94Q12767 1356 aa19.69■□□□□ 0.74
RPAIN-202ENST00000381208 TMEM131LA2VDJ0 1609 aa19.69■□□□□ 0.74
RPAIN-202ENST00000381208 PROSER2Q86WR7 435 aaPredicted RBP19.69■□□□□ 0.74
RPAIN-202ENST00000381208 E9PCH4 1651 aa19.68■□□□□ 0.74
RPAIN-202ENST00000381208 SOCS7O14512 581 aa19.68■□□□□ 0.74
RPAIN-202ENST00000381208 TBX22Q9Y458 520 aa19.68■□□□□ 0.74
RPAIN-202ENST00000381208 FAM135BQ49AJ0 1406 aa19.65■□□□□ 0.74
RPAIN-202ENST00000381208 NWD1Q149M9 1564 aa19.65■□□□□ 0.74
RPAIN-202ENST00000381208 CNKSR2Q8WXI2 1034 aa19.64■□□□□ 0.73
RPAIN-202ENST00000381208 PIK3R4Q99570 1358 aa19.64■□□□□ 0.73
RPAIN-202ENST00000381208 NCOA3Q9Y6Q9 1424 aa19.62■□□□□ 0.73
RPAIN-202ENST00000381208 MSH6P52701 1360 aa19.62■□□□□ 0.73
RPAIN-202ENST00000381208 XIRP1Q702N8 1843 aaKnown RBP19.6■□□□□ 0.73
RPAIN-202ENST00000381208 DIP2AQ14689 1571 aa19.6■□□□□ 0.73
RPAIN-202ENST00000381208 MED1Q15648 1581 aaPredicted RBP19.6■□□□□ 0.73
RPAIN-202ENST00000381208 NAIPQ13075 1403 aa19.6■□□□□ 0.73
RPAIN-202ENST00000381208 MYO5BQ9ULV0 1848 aa19.6■□□□□ 0.73
RPAIN-202ENST00000381208 ADAMTS13Q76LX8 1427 aa19.57■□□□□ 0.72
RPAIN-202ENST00000381208 HFM1A2PYH4 1435 aa19.56■□□□□ 0.72
RPAIN-202ENST00000381208 CHD2O14647 1828 aaKnown RBP19.56■□□□□ 0.72
RPAIN-202ENST00000381208 ZNF326Q5BKZ1 582 aaKnown RBP19.55■□□□□ 0.72
RPAIN-202ENST00000381208 NUTM2DQ5VT03 806 aaPredicted RBP19.55■□□□□ 0.72
RPAIN-202ENST00000381208 SPHKAPQ2M3C7 1700 aa19.54■□□□□ 0.72
RPAIN-202ENST00000381208 RBM33Q96EV2 1170 aaKnown RBP19.54■□□□□ 0.72
RPAIN-202ENST00000381208 SLAIN2Q9P270 581 aa19.54■□□□□ 0.72
RPAIN-202ENST00000381208 TRPM2O94759 1503 aa19.53■□□□□ 0.72
RPAIN-202ENST00000381208 C14orf37Q86TY3 774 aa19.52■□□□□ 0.72
RPAIN-202ENST00000381208 CADPS2Q86UW7 1296 aa19.52■□□□□ 0.72
RPAIN-202ENST00000381208 TRIM52Q96A61 297 aa19.52■□□□□ 0.72
RPAIN-202ENST00000381208 C19orf44Q9H6X5 657 aa19.51■□□□□ 0.71
RPAIN-202ENST00000381208 AMOTL2Q9Y2J4 779 aa19.5■□□□□ 0.71
RPAIN-202ENST00000381208 SLC4A1APQ9BWU0 796 aaKnown RBP19.49■□□□□ 0.71
RPAIN-202ENST00000381208 ATF3P18847 181 aa19.48■□□□□ 0.71
RPAIN-202ENST00000381208 SETBP1Q9Y6X0 1596 aa19.48■□□□□ 0.71
RPAIN-202ENST00000381208 ACIN1Q9UKV3 1341 aaKnown RBP19.48■□□□□ 0.71
RPAIN-202ENST00000381208 ROBO1Q9Y6N7 1651 aa19.47■□□□□ 0.71
RPAIN-202ENST00000381208 VGFO15240 615 aaPredicted RBP19.45■□□□□ 0.7
RPAIN-202ENST00000381208 RPGRIP1LQ68CZ1 1315 aa19.45■□□□□ 0.7
RPAIN-202ENST00000381208 CLTCL1P53675 1640 aa19.44■□□□□ 0.7
RPAIN-202ENST00000381208 DCCP43146 1447 aa19.44■□□□□ 0.7
RPAIN-202ENST00000381208 PTPRUQ92729 1446 aa19.43■□□□□ 0.7
RPAIN-202ENST00000381208 NEXMIFQ5QGS0 1516 aa19.42■□□□□ 0.7
RPAIN-202ENST00000381208 JCADQ9P266 1359 aa19.42■□□□□ 0.7
RPAIN-202ENST00000381208 KIF1BO60333 1816 aa19.41■□□□□ 0.7
RPAIN-202ENST00000381208 NRXN3Q9Y4C0 1643 aa19.4■□□□□ 0.7
RPAIN-202ENST00000381208 METP08581 1390 aa19.39■□□□□ 0.69
RPAIN-202ENST00000381208 XRN1Q8IZH2 1706 aaKnown RBP19.38■□□□□ 0.69
RPAIN-202ENST00000381208 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.38■□□□□ 0.69
RPAIN-202ENST00000381208 PHLPP1O60346 1717 aa19.36■□□□□ 0.69
RPAIN-202ENST00000381208 SPATA31A6Q5VVP1 1343 aa19.34■□□□□ 0.69
RPAIN-202ENST00000381208 CCDC144AA2RUR9 1427 aa19.34■□□□□ 0.69
RPAIN-202ENST00000381208 AHDC1Q5TGY3 1603 aaPredicted RBP19.34■□□□□ 0.69
RPAIN-202ENST00000381208 BRINP3Q76B58 766 aa19.33■□□□□ 0.69
RPAIN-202ENST00000381208 MPHOSPH9Q99550 1183 aa19.33■□□□□ 0.69
RPAIN-202ENST00000381208 RGS17Q9UGC6 210 aaPredicted RBP19.33■□□□□ 0.69
RPAIN-202ENST00000381208 PTCH1Q13635 1447 aa19.33■□□□□ 0.69
RPAIN-202ENST00000381208 ADGRL3Q9HAR2 1447 aa19.33■□□□□ 0.69
RPAIN-202ENST00000381208 COL16A1Q07092 1604 aaPredicted RBP19.32■□□□□ 0.68
RPAIN-202ENST00000381208 PRAG1Q86YV5 1406 aa19.31■□□□□ 0.68
RPAIN-202ENST00000381208 ANKRD30BQ9BXX2 1392 aa19.29■□□□□ 0.68
RPAIN-202ENST00000381208 MST1RQ04912 1400 aa19.29■□□□□ 0.68
RPAIN-202ENST00000381208 NCBP3Q53F19 620 aaKnown RBP19.28■□□□□ 0.68
RPAIN-202ENST00000381208 ASXL1Q8IXJ9 1541 aa19.27■□□□□ 0.67
RPAIN-202ENST00000381208 SETD5Q9C0A6 1442 aa19.26■□□□□ 0.67
RPAIN-202ENST00000381208 LRRC59Q96AG4 307 aaKnown RBP19.26■□□□□ 0.67
RPAIN-202ENST00000381208 MEX3CQ5U5Q3 659 aaKnown RBP19.25■□□□□ 0.67
RPAIN-202ENST00000381208 SPATA31E1Q6ZUB1 1445 aa19.25■□□□□ 0.67
RPAIN-202ENST00000381208 ROBO2Q9HCK4 1378 aa19.24■□□□□ 0.67
RPAIN-202ENST00000381208 PPLO60437 1756 aa19.24■□□□□ 0.67
RPAIN-202ENST00000381208 POTEAQ6S8J7 498 aa19.24■□□□□ 0.67
RPAIN-202ENST00000381208 RGL3Q3MIN7 710 aa19.23■□□□□ 0.67
RPAIN-202ENST00000381208 ZNF772Q68DY9 489 aaPredicted RBP19.23■□□□□ 0.67
RPAIN-202ENST00000381208 SHPRHQ149N8 1683 aa19.23■□□□□ 0.67
RPAIN-202ENST00000381208 SETD1AO15047 1707 aaKnown RBP19.22■□□□□ 0.67
RPAIN-202ENST00000381208 ADGRF5Q8IZF2 1346 aa19.21■□□□□ 0.67
RPAIN-202ENST00000381208 C1orf167Q5SNV9 1468 aa19.2■□□□□ 0.66
RPAIN-202ENST00000381208 NALCNQ8IZF0 1738 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms