RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 DNMT1P26358 1616 aaKnown RBP6.04□□□□□ -1.44
PTPRD-203ENST00000381196 TCOF1Q13428 1488 aaKnown RBP6.04□□□□□ -1.44
PTPRD-203ENST00000381196 FAM161AQ3B820 660 aa6.04□□□□□ -1.44
PTPRD-203ENST00000381196 NCOA2Q15596 1464 aa6.04□□□□□ -1.44
PTPRD-203ENST00000381196 POLR3GO15318 223 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-203ENST00000381196 SHANK2Q9UPX8 1470 aa6.04□□□□□ -1.44
PTPRD-203ENST00000381196 RWDD1Q9H446 243 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-203ENST00000381196 CCDC173Q0VFZ6 552 aa6.04□□□□□ -1.44
PTPRD-203ENST00000381196 NBR1Q14596 966 aa6.04□□□□□ -1.44
PTPRD-203ENST00000381196 CCDC39Q9UFE4 941 aa6.04□□□□□ -1.44
PTPRD-203ENST00000381196 ZNF330Q9Y3S2 320 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-203ENST00000381196 RUSC2Q8N2Y8 1516 aa6.04□□□□□ -1.44
PTPRD-203ENST00000381196 TPM4P67936 248 aa6.03□□□□□ -1.44
PTPRD-203ENST00000381196 UGGT2Q9NYU1 1516 aa6.03□□□□□ -1.44
PTPRD-203ENST00000381196 CLSTN1O94985 981 aa6.03□□□□□ -1.44
PTPRD-203ENST00000381196 CAVIN2O95810 425 aa6.03□□□□□ -1.44
PTPRD-203ENST00000381196 G3V3G9 751 aa6.03□□□□□ -1.44
PTPRD-203ENST00000381196 DCAF8Q5TAQ9 597 aa6.03□□□□□ -1.44
PTPRD-203ENST00000381196 ANO8Q9HCE9 1232 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-203ENST00000381196 YEATS2Q9ULM3 1422 aa6.03□□□□□ -1.44
PTPRD-203ENST00000381196 FHOD3Q2V2M9 1422 aa6.03□□□□□ -1.44
PTPRD-203ENST00000381196 TPM1P09493 284 aa6.03□□□□□ -1.44
PTPRD-203ENST00000381196 ARGLU1Q9NWB6 273 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-203ENST00000381196 ADCY10Q96PN6 1610 aa6.03□□□□□ -1.44
PTPRD-203ENST00000381196 CENPJQ9HC77 1338 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-203ENST00000381196 MSH5O43196 834 aa6.02□□□□□ -1.45
PTPRD-203ENST00000381196 NLRP13Q86W25 1043 aa6.02□□□□□ -1.45
PTPRD-203ENST00000381196 CCDC141Q6ZP82 1450 aa6.02□□□□□ -1.45
PTPRD-203ENST00000381196 MYBBP1AQ9BQG0 1328 aaKnown RBP6.02□□□□□ -1.45
PTPRD-203ENST00000381196 KAT6BQ8WYB5 2073 aa6.02□□□□□ -1.45
PTPRD-203ENST00000381196 GOLGA6L4A6NEF3 574 aa6.02□□□□□ -1.45
PTPRD-203ENST00000381196 SAFB2Q14151 953 aaKnown RBP eCLIP6.02□□□□□ -1.45
PTPRD-203ENST00000381196 PDCL3Q9H2J4 239 aa6.02□□□□□ -1.45
PTPRD-203ENST00000381196 MBD3O95983 291 aa6.02□□□□□ -1.45
PTPRD-203ENST00000381196 HDGFL2Q7Z4V5 671 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-203ENST00000381196 CARD11Q9BXL7 1154 aa6.01□□□□□ -1.45
PTPRD-203ENST00000381196 TOPBP1Q92547 1522 aa6.01□□□□□ -1.45
PTPRD-203ENST00000381196 GRIN2BQ13224 1484 aa6.01□□□□□ -1.45
PTPRD-203ENST00000381196 SNAPC4Q5SXM2 1469 aa6.01□□□□□ -1.45
PTPRD-203ENST00000381196 TNNT3P45378 269 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-203ENST00000381196 STK26Q9P289 416 aa6.01□□□□□ -1.45
PTPRD-203ENST00000381196 GAPVD1Q14C86 1478 aa6.01□□□□□ -1.45
PTPRD-203ENST00000381196 ADAMTS12P58397 1594 aa6□□□□□ -1.45
PTPRD-203ENST00000381196 U2SURPO15042 1029 aaKnown RBP6□□□□□ -1.45
PTPRD-203ENST00000381196 MCM2P49736 904 aa6□□□□□ -1.45
PTPRD-203ENST00000381196 CFAP65Q6ZU64 1925 aaKnown RBP6□□□□□ -1.45
PTPRD-203ENST00000381196 FTSJ3Q8IY81 847 aaKnown RBP6□□□□□ -1.45
PTPRD-203ENST00000381196 RTF1Q92541 710 aaKnown RBP6□□□□□ -1.45
PTPRD-203ENST00000381196 DDX10Q13206 875 aaKnown RBP6□□□□□ -1.45
PTPRD-203ENST00000381196 FGD1P98174 961 aa6□□□□□ -1.45
PTPRD-203ENST00000381196 NUCB2P80303 420 aa5.99□□□□□ -1.45
PTPRD-203ENST00000381196 RAPGEF6Q8TEU7 1601 aa5.99□□□□□ -1.45
PTPRD-203ENST00000381196 UHRF1BP1LA0JNW5 1464 aa5.99□□□□□ -1.45
PTPRD-203ENST00000381196 GTF2E1P29083 439 aaPredicted RBP5.99□□□□□ -1.45
PTPRD-203ENST00000381196 LAMC1P11047 1609 aa5.99□□□□□ -1.45
PTPRD-203ENST00000381196 SLKQ9H2G2 1235 aaPredicted RBP5.99□□□□□ -1.45
PTPRD-203ENST00000381196 NGDNQ8NEJ9 315 aaKnown RBP5.99□□□□□ -1.45
PTPRD-203ENST00000381196 CCDC70Q6NSX1 233 aa5.98□□□□□ -1.45
PTPRD-203ENST00000381196 RCAN3Q9UKA8 241 aa5.98□□□□□ -1.45
PTPRD-203ENST00000381196 WDR62O43379 1518 aa5.98□□□□□ -1.45
PTPRD-203ENST00000381196 ST18O60284 1047 aa5.98□□□□□ -1.45
PTPRD-203ENST00000381196 ERCC4Q92889 916 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-203ENST00000381196 GTPBP4Q9BZE4 634 aaKnown RBP5.98□□□□□ -1.45
PTPRD-203ENST00000381196 DYNC1I1O14576 645 aa5.98□□□□□ -1.45
PTPRD-203ENST00000381196 ZNF428Q96B54 188 aa5.98□□□□□ -1.45
PTPRD-203ENST00000381196 HSP90AB1P08238 724 aaKnown RBP5.98□□□□□ -1.45
PTPRD-203ENST00000381196 NEUROD2Q15784 382 aa5.98□□□□□ -1.45
PTPRD-203ENST00000381196 CAGE1Q8TC20 777 aa5.97□□□□□ -1.45
PTPRD-203ENST00000381196 IGF1RP08069 1367 aa5.97□□□□□ -1.45
PTPRD-203ENST00000381196 KIF20AO95235 890 aa5.97□□□□□ -1.45
PTPRD-203ENST00000381196 SH3BGRP55822 239 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-203ENST00000381196 NCBP3Q53F19 620 aaKnown RBP5.97□□□□□ -1.45
PTPRD-203ENST00000381196 SF3B2Q13435 895 aaKnown RBP5.97□□□□□ -1.45
PTPRD-203ENST00000381196 TXLNBQ8N3L3 684 aa5.97□□□□□ -1.45
PTPRD-203ENST00000381196 TDRD9Q8NDG6 1382 aaKnown RBP5.97□□□□□ -1.45
PTPRD-203ENST00000381196 NUP160Q12769 1436 aa5.97□□□□□ -1.45
PTPRD-203ENST00000381196 CHMP5Q9NZZ3 219 aa5.97□□□□□ -1.45
PTPRD-203ENST00000381196 SPAG9O60271 1321 aaKnown RBP5.97□□□□□ -1.45
PTPRD-203ENST00000381196 IFT140Q96RY7 1462 aa5.97□□□□□ -1.45
PTPRD-203ENST00000381196 KCNJ4P48050 445 aa5.96□□□□□ -1.45
PTPRD-203ENST00000381196 PRIMPOLQ96LW4 560 aa5.96□□□□□ -1.45
PTPRD-203ENST00000381196 CDR1P51861 262 aa5.96□□□□□ -1.45
PTPRD-203ENST00000381196 KIF3BO15066 747 aa5.96□□□□□ -1.46
PTPRD-203ENST00000381196 FAM69CQ0P6D2 419 aa5.96□□□□□ -1.46
PTPRD-203ENST00000381196 TACO1Q9BSH4 297 aaKnown RBP5.96□□□□□ -1.46
PTPRD-203ENST00000381196 EVA1CP58658 441 aa5.96□□□□□ -1.46
PTPRD-203ENST00000381196 MNS1Q8NEH6 495 aa5.96□□□□□ -1.46
PTPRD-203ENST00000381196 CALCOCO1Q9P1Z2 691 aa5.96□□□□□ -1.46
PTPRD-203ENST00000381196 MORC1Q86VD1 984 aa5.96□□□□□ -1.46
PTPRD-203ENST00000381196 TAOK2Q9UL54 1235 aa5.96□□□□□ -1.46
PTPRD-203ENST00000381196 EPRSP07814 1512 aaKnown RBP5.96□□□□□ -1.46
PTPRD-203ENST00000381196 NOC3LQ8WTT2 800 aaKnown RBP5.96□□□□□ -1.46
PTPRD-203ENST00000381196 MRC2Q9UBG0 1479 aa5.96□□□□□ -1.46
PTPRD-203ENST00000381196 LMOD3Q0VAK6 560 aa5.96□□□□□ -1.46
PTPRD-203ENST00000381196 KDM5DQ9BY66 1539 aa5.95□□□□□ -1.46
PTPRD-203ENST00000381196 A6NNZ2 444 aa5.95□□□□□ -1.46
PTPRD-203ENST00000381196 TMF1P82094 1093 aa5.95□□□□□ -1.46
PTPRD-203ENST00000381196 TUBB8Q3ZCM7 444 aa5.95□□□□□ -1.46
PTPRD-203ENST00000381196 RBM28Q9NW13 759 aaKnown RBP5.95□□□□□ -1.46
PTPRD-203ENST00000381196 NEMFO60524 1076 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms