RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CDCA8Q53HL2 280 aa31.47■■■□□ 2.63
VPS16-201ENST00000380443 SIGLEC1Q9BZZ2 1709 aa31.47■■■□□ 2.63
VPS16-201ENST00000380443 IFT172Q9UG01 1749 aa31.47■■■□□ 2.63
VPS16-201ENST00000380443 NPATQ14207 1427 aa31.47■■■□□ 2.63
VPS16-201ENST00000380443 FAM9BQ8IZU0 186 aa31.47■■■□□ 2.63
VPS16-201ENST00000380443 ZBED9Q6R2W3 1325 aa31.46■■■□□ 2.63
VPS16-201ENST00000380443 AGLP35573 1532 aa31.46■■■□□ 2.63
VPS16-201ENST00000380443 ADGRB3O60242 1522 aa31.45■■■□□ 2.63
VPS16-201ENST00000380443 DISP3Q9P2K9 1392 aa31.45■■■□□ 2.63
VPS16-201ENST00000380443 GGT6Q6P531 493 aa31.45■■■□□ 2.62
VPS16-201ENST00000380443 BRD4O60885 1362 aaPredicted RBP31.45■■■□□ 2.62
VPS16-201ENST00000380443 NRXN1Q9ULB1 1477 aa31.45■■■□□ 2.62
VPS16-201ENST00000380443 MYBBP1AQ9BQG0 1328 aaKnown RBP31.44■■■□□ 2.62
VPS16-201ENST00000380443 ZC3H13Q5T200 1668 aaKnown RBP31.43■■■□□ 2.62
VPS16-201ENST00000380443 ARHGAP31Q2M1Z3 1444 aa31.42■■■□□ 2.62
VPS16-201ENST00000380443 UGGT1Q9NYU2 1555 aa31.42■■■□□ 2.62
VPS16-201ENST00000380443 RPGRIP1LQ68CZ1 1315 aa31.42■■■□□ 2.62
VPS16-201ENST00000380443 CAMSAP1Q5T5Y3 1602 aa31.4■■■□□ 2.62
VPS16-201ENST00000380443 MLECQ14165 292 aa31.4■■■□□ 2.62
VPS16-201ENST00000380443 ADAMTSL3P82987 1691 aa31.4■■■□□ 2.62
VPS16-201ENST00000380443 PER1O15534 1290 aaPredicted RBP31.4■■■□□ 2.62
VPS16-201ENST00000380443 PARD3Q8TEW0 1356 aa31.38■■■□□ 2.61
VPS16-201ENST00000380443 NOS1P29475 1434 aa31.38■■■□□ 2.61
VPS16-201ENST00000380443 TMC1Q8TDI8 760 aa31.38■■■□□ 2.61
VPS16-201ENST00000380443 AEBP2Q6ZN18 517 aaPredicted RBP31.37■■■□□ 2.61
VPS16-201ENST00000380443 MROH2AA6NES4 1674 aa31.37■■■□□ 2.61
VPS16-201ENST00000380443 PNISRQ8TF01 805 aaKnown RBP31.35■■■□□ 2.61
VPS16-201ENST00000380443 SETBP1Q9Y6X0 1596 aa31.33■■■□□ 2.61
VPS16-201ENST00000380443 FKBP8Q14318 412 aa31.33■■■□□ 2.61
VPS16-201ENST00000380443 ADGRF5Q8IZF2 1346 aa31.31■■■□□ 2.6
VPS16-201ENST00000380443 NLRP13Q86W25 1043 aa31.31■■■□□ 2.6
VPS16-201ENST00000380443 PIK3C2BO00750 1634 aa31.29■■■□□ 2.6
VPS16-201ENST00000380443 PPLO60437 1756 aa31.29■■■□□ 2.6
VPS16-201ENST00000380443 PANK3Q9H999 370 aa31.28■■■□□ 2.6
VPS16-201ENST00000380443 SYNMO15061 1565 aa31.28■■■□□ 2.6
VPS16-201ENST00000380443 ESF1Q9H501 851 aaKnown RBP31.28■■■□□ 2.6
VPS16-201ENST00000380443 LRPPRCP42704 1394 aaKnown RBP31.28■■■□□ 2.6
VPS16-201ENST00000380443 FER1L4A9Z1Z3 1794 aa31.27■■■□□ 2.6
VPS16-201ENST00000380443 CFAP70Q5T0N1 1121 aa31.26■■■□□ 2.6
VPS16-201ENST00000380443 SBNO2Q9Y2G9 1366 aa31.26■■■□□ 2.59
VPS16-201ENST00000380443 MYO3AQ8NEV4 1616 aa31.24■■■□□ 2.59
VPS16-201ENST00000380443 PPP6R1Q9UPN7 881 aa31.24■■■□□ 2.59
VPS16-201ENST00000380443 RIMS1Q86UR5 1692 aaKnown RBP31.24■■■□□ 2.59
VPS16-201ENST00000380443 PIK3C2GO75747 1445 aa31.24■■■□□ 2.59
VPS16-201ENST00000380443 INSRP06213 1382 aa31.23■■■□□ 2.59
VPS16-201ENST00000380443 ERICH6BQ5W0A0 696 aa31.23■■■□□ 2.59
VPS16-201ENST00000380443 SLC52A1Q9NWF4 448 aa31.23■■■□□ 2.59
VPS16-201ENST00000380443 PTPRMP28827 1452 aa31.22■■■□□ 2.59
VPS16-201ENST00000380443 CHGAP10645 457 aaKnown RBP31.21■■■□□ 2.59
VPS16-201ENST00000380443 C14orf93Q9H972 538 aaKnown RBP31.21■■■□□ 2.59
VPS16-201ENST00000380443 CNGB1Q14028 1251 aaPredicted RBP31.2■■■□□ 2.59
VPS16-201ENST00000380443 KDM5AP29375 1690 aaKnown RBP31.2■■■□□ 2.58
VPS16-201ENST00000380443 CFAP65Q6ZU64 1925 aaKnown RBP31.19■■■□□ 2.58
VPS16-201ENST00000380443 NPC1L1Q9UHC9 1359 aa31.17■■■□□ 2.58
VPS16-201ENST00000380443 VGFO15240 615 aaPredicted RBP31.16■■■□□ 2.58
VPS16-201ENST00000380443 ZFYVE9O95405 1425 aa31.15■■■□□ 2.58
VPS16-201ENST00000380443 KNSTRNQ9Y448 316 aa31.15■■■□□ 2.58
VPS16-201ENST00000380443 SMG6Q86US8 1419 aaKnown RBP31.15■■■□□ 2.58
VPS16-201ENST00000380443 ERVK-7P63135 1459 aa31.11■■■□□ 2.57
VPS16-201ENST00000380443 ADGRB1O14514 1584 aa31.11■■■□□ 2.57
VPS16-201ENST00000380443 NEXMIFQ5QGS0 1516 aa31.1■■■□□ 2.57
VPS16-201ENST00000380443 PREX1Q8TCU6 1659 aa31.1■■■□□ 2.57
VPS16-201ENST00000380443 MYOM1P52179 1685 aa31.09■■■□□ 2.57
VPS16-201ENST00000380443 ASXL1Q8IXJ9 1541 aa31.09■■■□□ 2.57
VPS16-201ENST00000380443 CENPJQ9HC77 1338 aaPredicted RBP31.09■■■□□ 2.57
VPS16-201ENST00000380443 CC2D1BQ5T0F9 858 aaKnown RBP31.08■■■□□ 2.57
VPS16-201ENST00000380443 CLTCQ00610 1675 aaKnown RBP31.07■■■□□ 2.56
VPS16-201ENST00000380443 PLPPR3Q6T4P5 718 aa31.06■■■□□ 2.56
VPS16-201ENST00000380443 IDI1Q13907 227 aa31.05■■■□□ 2.56
VPS16-201ENST00000380443 AMER1Q5JTC6 1135 aaPredicted RBP31.05■■■□□ 2.56
VPS16-201ENST00000380443 NUDCQ9Y266 331 aa31.05■■■□□ 2.56
VPS16-201ENST00000380443 PUS7Q96PZ0 661 aaKnown RBP31.03■■■□□ 2.56
VPS16-201ENST00000380443 ZMYM3Q14202 1370 aa31.03■■■□□ 2.56
VPS16-201ENST00000380443 C3P01024 1663 aa31.01■■■□□ 2.56
VPS16-201ENST00000380443 CEBPAP49715 358 aaPredicted RBP31.01■■■□□ 2.55
VPS16-201ENST00000380443 TMEM131LA2VDJ0 1609 aa31■■■□□ 2.55
VPS16-201ENST00000380443 BCANQ96GW7 911 aa31■■■□□ 2.55
VPS16-201ENST00000380443 PDE3BQ13370 1112 aa30.98■■■□□ 2.55
VPS16-201ENST00000380443 QRICH2Q9H0J4 1663 aa30.96■■■□□ 2.55
VPS16-201ENST00000380443 TRAK1Q9UPV9 953 aa30.95■■■□□ 2.55
VPS16-201ENST00000380443 BLMP54132 1417 aaPredicted RBP30.95■■■□□ 2.54
VPS16-201ENST00000380443 PPP2R1AP30153 589 aa30.94■■■□□ 2.54
VPS16-201ENST00000380443 RNF123Q5XPI4 1314 aa30.9■■■□□ 2.54
VPS16-201ENST00000380443 TMEM132EQ6IEE7 984 aa30.88■■■□□ 2.53
VPS16-201ENST00000380443 SPATA31D1Q6ZQQ2 1576 aa30.88■■■□□ 2.53
VPS16-201ENST00000380443 ARHGEF28Q8N1W1 1705 aaKnown RBP30.87■■■□□ 2.53
VPS16-201ENST00000380443 PPP4R2Q9NY27 417 aa30.87■■■□□ 2.53
VPS16-201ENST00000380443 SETD1BQ9UPS6 1966 aaKnown RBP30.86■■■□□ 2.53
VPS16-201ENST00000380443 MYO5BQ9ULV0 1848 aa30.86■■■□□ 2.53
VPS16-201ENST00000380443 EVC2Q86UK5 1308 aa30.85■■■□□ 2.53
VPS16-201ENST00000380443 FBXO31Q5XUX0 539 aaPredicted RBP30.82■■■□□ 2.52
VPS16-201ENST00000380443 CARD14Q9BXL6 1004 aa30.8■■■□□ 2.52
VPS16-201ENST00000380443 WDR43Q15061 677 aaKnown RBP eCLIP30.8■■■□□ 2.52
VPS16-201ENST00000380443 USP32Q8NFA0 1604 aa30.78■■■□□ 2.52
VPS16-201ENST00000380443 STAG3Q9UJ98 1225 aa30.78■■■□□ 2.52
VPS16-201ENST00000380443 NINLQ9Y2I6 1382 aa30.78■■■□□ 2.52
VPS16-201ENST00000380443 LMTK3Q96Q04 1460 aa30.77■■■□□ 2.52
VPS16-201ENST00000380443 NUTM2DQ5VT03 806 aaPredicted RBP30.77■■■□□ 2.52
VPS16-201ENST00000380443 IRX6P78412 446 aaPredicted RBP30.75■■■□□ 2.51
VPS16-201ENST00000380443 TNRQ92752 1358 aa30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms