RNA–Protein interactions for RNA: ENST00000379813.7

APTX-203, Transcript of aprataxin, humanhuman

TSL 5 BASIC

Gene APTX, Length 1,121 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-203ENST00000379813 ARHGAP23Q9P227 1491 aa18.66■□□□□ 0.58
APTX-203ENST00000379813 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
APTX-203ENST00000379813 TMEM131LA2VDJ0 1609 aa18.65■□□□□ 0.58
APTX-203ENST00000379813 SLIT1O75093 1534 aa18.64■□□□□ 0.58
APTX-203ENST00000379813 SLC4A1APQ9BWU0 796 aaKnown RBP18.64■□□□□ 0.57
APTX-203ENST00000379813 CLTCL1P53675 1640 aa18.63■□□□□ 0.57
APTX-203ENST00000379813 TMEM2Q9UHN6 1383 aa18.63■□□□□ 0.57
APTX-203ENST00000379813 ANKLE2Q86XL3 938 aa18.62■□□□□ 0.57
APTX-203ENST00000379813 SLC52A1Q9NWF4 448 aa18.62■□□□□ 0.57
APTX-203ENST00000379813 ZNF335Q9H4Z2 1342 aaPredicted RBP18.62■□□□□ 0.57
APTX-203ENST00000379813 NPHP4O75161 1426 aaPredicted RBP18.61■□□□□ 0.57
APTX-203ENST00000379813 STAG3Q9UJ98 1225 aa18.61■□□□□ 0.57
APTX-203ENST00000379813 KDM5AP29375 1690 aaKnown RBP18.6■□□□□ 0.57
APTX-203ENST00000379813 LTBP4Q8N2S1 1624 aa18.6■□□□□ 0.57
APTX-203ENST00000379813 MED14O60244 1454 aa18.6■□□□□ 0.57
APTX-203ENST00000379813 SCAF11Q99590 1463 aaKnown RBP18.6■□□□□ 0.57
APTX-203ENST00000379813 CHGAP10645 457 aaKnown RBP18.6■□□□□ 0.57
APTX-203ENST00000379813 TXNDC2Q86VQ3 553 aa18.6■□□□□ 0.57
APTX-203ENST00000379813 MPHOSPH9Q99550 1183 aa18.6■□□□□ 0.57
APTX-203ENST00000379813 TRPM2O94759 1503 aa18.59■□□□□ 0.57
APTX-203ENST00000379813 NUTM2DQ5VT03 806 aaPredicted RBP18.59■□□□□ 0.57
APTX-203ENST00000379813 ZFYVE9O95405 1425 aa18.58■□□□□ 0.57
APTX-203ENST00000379813 IQGAP1P46940 1657 aa18.58■□□□□ 0.57
APTX-203ENST00000379813 ZNF219Q9P2Y4 722 aaPredicted RBP18.56■□□□□ 0.56
APTX-203ENST00000379813 RIMS2Q9UQ26 1411 aa18.56■□□□□ 0.56
APTX-203ENST00000379813 STRCP1A6NGW2 1772 aa18.54■□□□□ 0.56
APTX-203ENST00000379813 CERKQ8TCT0 537 aa18.52■□□□□ 0.56
APTX-203ENST00000379813 SLC26A8Q96RN1 970 aa18.51■□□□□ 0.55
APTX-203ENST00000379813 SAMD1Q6SPF0 538 aaPredicted RBP18.5■□□□□ 0.55
APTX-203ENST00000379813 EID1Q9Y6B2 187 aa18.5■□□□□ 0.55
APTX-203ENST00000379813 NEXMIFQ5QGS0 1516 aa18.48■□□□□ 0.55
APTX-203ENST00000379813 ILDR1Q86SU0 546 aaPredicted RBP18.47■□□□□ 0.55
APTX-203ENST00000379813 KIF1BO60333 1816 aa18.46■□□□□ 0.55
APTX-203ENST00000379813 PLEKHG1Q9ULL1 1385 aa18.45■□□□□ 0.54
APTX-203ENST00000379813 ZNF326Q5BKZ1 582 aaKnown RBP18.45■□□□□ 0.54
APTX-203ENST00000379813 ADAMTS13Q76LX8 1427 aa18.45■□□□□ 0.54
APTX-203ENST00000379813 NRXN3Q9Y4C0 1643 aa18.45■□□□□ 0.54
APTX-203ENST00000379813 HRCP23327 699 aa18.44■□□□□ 0.54
APTX-203ENST00000379813 SPATA31E1Q6ZUB1 1445 aa18.43■□□□□ 0.54
APTX-203ENST00000379813 PPP1R15AO75807 674 aaPredicted RBP18.43■□□□□ 0.54
APTX-203ENST00000379813 ANKRD30BQ9BXX2 1392 aa18.42■□□□□ 0.54
APTX-203ENST00000379813 CCDC144AA2RUR9 1427 aa18.42■□□□□ 0.54
APTX-203ENST00000379813 BCANQ96GW7 911 aa18.42■□□□□ 0.54
APTX-203ENST00000379813 RGL3Q3MIN7 710 aa18.41■□□□□ 0.54
APTX-203ENST00000379813 RBM33Q96EV2 1170 aaKnown RBP18.4■□□□□ 0.54
APTX-203ENST00000379813 LRRC7Q96NW7 1537 aa18.39■□□□□ 0.54
APTX-203ENST00000379813 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.39■□□□□ 0.53
APTX-203ENST00000379813 PPLO60437 1756 aa18.38■□□□□ 0.53
APTX-203ENST00000379813 PTPRUQ92729 1446 aa18.38■□□□□ 0.53
APTX-203ENST00000379813 ZEB1P37275 1124 aaPredicted RBP18.37■□□□□ 0.53
APTX-203ENST00000379813 FBXO41Q8TF61 875 aa18.37■□□□□ 0.53
APTX-203ENST00000379813 CPS1P31327 1500 aa18.37■□□□□ 0.53
APTX-203ENST00000379813 XIRP1Q702N8 1843 aaKnown RBP18.37■□□□□ 0.53
APTX-203ENST00000379813 SETBP1Q9Y6X0 1596 aa18.36■□□□□ 0.53
APTX-203ENST00000379813 IFT172Q9UG01 1749 aa18.35■□□□□ 0.53
APTX-203ENST00000379813 ALKQ9UM73 1620 aa18.35■□□□□ 0.53
APTX-203ENST00000379813 NWD1Q149M9 1564 aa18.35■□□□□ 0.53
APTX-203ENST00000379813 ADGRF5Q8IZF2 1346 aa18.35■□□□□ 0.53
APTX-203ENST00000379813 METP08581 1390 aa18.34■□□□□ 0.53
APTX-203ENST00000379813 ACIN1Q9UKV3 1341 aaKnown RBP18.34■□□□□ 0.53
APTX-203ENST00000379813 HDGFP51858 240 aaKnown RBP18.34■□□□□ 0.53
APTX-203ENST00000379813 TBX22Q9Y458 520 aa18.34■□□□□ 0.53
APTX-203ENST00000379813 CHD2O14647 1828 aaKnown RBP18.33■□□□□ 0.53
APTX-203ENST00000379813 SETD1AO15047 1707 aaKnown RBP18.33■□□□□ 0.52
APTX-203ENST00000379813 KCNA6P17658 529 aa18.33■□□□□ 0.52
APTX-203ENST00000379813 IQSEC2Q5JU85 1478 aa18.31■□□□□ 0.52
APTX-203ENST00000379813 DIP2AQ14689 1571 aa18.3■□□□□ 0.52
APTX-203ENST00000379813 TMEM94Q12767 1356 aa18.3■□□□□ 0.52
APTX-203ENST00000379813 RPGRIP1LQ68CZ1 1315 aa18.29■□□□□ 0.52
APTX-203ENST00000379813 ABCB7O75027 752 aa18.29■□□□□ 0.52
APTX-203ENST00000379813 DHX57Q6P158 1386 aaKnown RBP18.29■□□□□ 0.52
APTX-203ENST00000379813 UBAP1LF5GYI3 381 aa18.28■□□□□ 0.52
APTX-203ENST00000379813 XRN1Q8IZH2 1706 aaKnown RBP18.27■□□□□ 0.52
APTX-203ENST00000379813 VGFO15240 615 aaPredicted RBP18.27■□□□□ 0.52
APTX-203ENST00000379813 PROSER2Q86WR7 435 aaPredicted RBP18.27■□□□□ 0.52
APTX-203ENST00000379813 ASXL1Q8IXJ9 1541 aa18.27■□□□□ 0.51
APTX-203ENST00000379813 SIN3AQ96ST3 1273 aa18.26■□□□□ 0.51
APTX-203ENST00000379813 AMOTL2Q9Y2J4 779 aa18.26■□□□□ 0.51
APTX-203ENST00000379813 NKTRP30414 1462 aaKnown RBP18.26■□□□□ 0.51
APTX-203ENST00000379813 MYCNP04198 464 aaPredicted RBP18.25■□□□□ 0.51
APTX-203ENST00000379813 PIK3C2GO75747 1445 aa18.23■□□□□ 0.51
APTX-203ENST00000379813 NRXN1Q9ULB1 1477 aa18.23■□□□□ 0.51
APTX-203ENST00000379813 PIK3R4Q99570 1358 aa18.22■□□□□ 0.51
APTX-203ENST00000379813 TMEM132EQ6IEE7 984 aa18.22■□□□□ 0.51
APTX-203ENST00000379813 KDM2AQ9Y2K7 1162 aa18.22■□□□□ 0.51
APTX-203ENST00000379813 MYOM2P54296 1465 aa18.21■□□□□ 0.51
APTX-203ENST00000379813 PIP4K2BP78356 416 aa18.21■□□□□ 0.51
APTX-203ENST00000379813 CFAP70Q5T0N1 1121 aa18.2■□□□□ 0.5
APTX-203ENST00000379813 DCAF11Q8TEB1 546 aa18.2■□□□□ 0.5
APTX-203ENST00000379813 ROBO2Q9HCK4 1378 aa18.19■□□□□ 0.5
APTX-203ENST00000379813 NEUROD1Q13562 356 aa18.16■□□□□ 0.5
APTX-203ENST00000379813 CCER1Q8TC90 406 aaPredicted RBP18.16■□□□□ 0.5
APTX-203ENST00000379813 STK26Q9P289 416 aa18.16■□□□□ 0.5
APTX-203ENST00000379813 POTEHQ6S545 545 aa18.15■□□□□ 0.5
APTX-203ENST00000379813 C14orf93Q9H972 538 aaKnown RBP18.15■□□□□ 0.5
APTX-203ENST00000379813 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.15■□□□□ 0.5
APTX-203ENST00000379813 TOM1O60784 492 aa18.14■□□□□ 0.49
APTX-203ENST00000379813 NALCNQ8IZF0 1738 aa18.14■□□□□ 0.49
APTX-203ENST00000379813 PLEKHH1Q9ULM0 1364 aa18.14■□□□□ 0.49
APTX-203ENST00000379813 ADGRB1O14514 1584 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms