RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 EFCAB6Q5THR3 1501 aa10.22□□□□□ -0.77
GPCPD1-201ENST00000379019 SPATA31E1Q6ZUB1 1445 aa10.22□□□□□ -0.77
GPCPD1-201ENST00000379019 ERVK-7P63135 1459 aa10.22□□□□□ -0.77
GPCPD1-201ENST00000379019 ANP32CO43423 234 aa10.21□□□□□ -0.77
GPCPD1-201ENST00000379019 ANKRD50Q9ULJ7 1429 aa10.21□□□□□ -0.77
GPCPD1-201ENST00000379019 KIF3BO15066 747 aa10.2□□□□□ -0.78
GPCPD1-201ENST00000379019 HFM1A2PYH4 1435 aa10.2□□□□□ -0.78
GPCPD1-201ENST00000379019 WASHC2CQ9Y4E1 1318 aa10.2□□□□□ -0.78
GPCPD1-201ENST00000379019 KIF7Q2M1P5 1343 aa10.19□□□□□ -0.78
GPCPD1-201ENST00000379019 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.19□□□□□ -0.78
GPCPD1-201ENST00000379019 GOLGB1Q14789 3259 aaKnown RBP10.19□□□□□ -0.78
GPCPD1-201ENST00000379019 MED14O60244 1454 aa10.18□□□□□ -0.78
GPCPD1-201ENST00000379019 POLR1AO95602 1720 aaPredicted RBP10.18□□□□□ -0.78
GPCPD1-201ENST00000379019 CEP152O94986 1710 aa10.18□□□□□ -0.78
GPCPD1-201ENST00000379019 NEURL4Q96JN8 1562 aa10.18□□□□□ -0.78
GPCPD1-201ENST00000379019 SLIT1O75093 1534 aa10.17□□□□□ -0.78
GPCPD1-201ENST00000379019 NOS1P29475 1434 aa10.17□□□□□ -0.78
GPCPD1-201ENST00000379019 THEMISQ8N1K5 641 aaPredicted RBP10.16□□□□□ -0.78
GPCPD1-201ENST00000379019 MLECQ14165 292 aa10.16□□□□□ -0.78
GPCPD1-201ENST00000379019 SLC52A1Q9NWF4 448 aa10.16□□□□□ -0.78
GPCPD1-201ENST00000379019 HDGFP51858 240 aaKnown RBP10.15□□□□□ -0.78
GPCPD1-201ENST00000379019 ADGRB3O60242 1522 aa10.15□□□□□ -0.78
GPCPD1-201ENST00000379019 CPS1P31327 1500 aa10.15□□□□□ -0.78
GPCPD1-201ENST00000379019 ARHGAP23Q9P227 1491 aa10.15□□□□□ -0.78
GPCPD1-201ENST00000379019 TONSLQ96HA7 1378 aa10.15□□□□□ -0.78
GPCPD1-201ENST00000379019 GGT6Q6P531 493 aa10.15□□□□□ -0.79
GPCPD1-201ENST00000379019 CCDC7Q96M83 1385 aa10.14□□□□□ -0.79
GPCPD1-201ENST00000379019 SLC4A3P48751 1232 aa10.14□□□□□ -0.79
GPCPD1-201ENST00000379019 UGGT1Q9NYU2 1555 aa10.14□□□□□ -0.79
GPCPD1-201ENST00000379019 PIK3C2BO00750 1634 aa10.14□□□□□ -0.79
GPCPD1-201ENST00000379019 DIP2AQ14689 1571 aa10.14□□□□□ -0.79
GPCPD1-201ENST00000379019 SYNMO15061 1565 aa10.14□□□□□ -0.79
GPCPD1-201ENST00000379019 CDCA7LQ96GN5 454 aa10.13□□□□□ -0.79
GPCPD1-201ENST00000379019 PLIN1O60240 522 aa10.13□□□□□ -0.79
GPCPD1-201ENST00000379019 UBR1Q8IWV7 1749 aa10.13□□□□□ -0.79
GPCPD1-201ENST00000379019 STRCQ7RTU9 1775 aa10.12□□□□□ -0.79
GPCPD1-201ENST00000379019 C20orf194Q5TEA3 1177 aa10.12□□□□□ -0.79
GPCPD1-201ENST00000379019 MRS2Q9HD23 443 aa10.11□□□□□ -0.79
GPCPD1-201ENST00000379019 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.1□□□□□ -0.79
GPCPD1-201ENST00000379019 RNF123Q5XPI4 1314 aa10.1□□□□□ -0.79
GPCPD1-201ENST00000379019 LAS1LQ9Y4W2 734 aaKnown RBP10.1□□□□□ -0.79
GPCPD1-201ENST00000379019 MPHOSPH9Q99550 1183 aa10.1□□□□□ -0.79
GPCPD1-201ENST00000379019 TRPM2O94759 1503 aa10.09□□□□□ -0.79
GPCPD1-201ENST00000379019 EXOC6Q8TAG9 804 aa10.09□□□□□ -0.79
GPCPD1-201ENST00000379019 SRCAPQ6ZRS2 3230 aa10.09□□□□□ -0.79
GPCPD1-201ENST00000379019 BRPF3Q9ULD4 1205 aa10.09□□□□□ -0.79
GPCPD1-201ENST00000379019 IQGAP1P46940 1657 aa10.09□□□□□ -0.79
GPCPD1-201ENST00000379019 SPHKAPQ2M3C7 1700 aa10.08□□□□□ -0.8
GPCPD1-201ENST00000379019 ANKLE2Q86XL3 938 aa10.08□□□□□ -0.8
GPCPD1-201ENST00000379019 PPP4R2Q9NY27 417 aa10.08□□□□□ -0.8
GPCPD1-201ENST00000379019 SCAF11Q99590 1463 aaKnown RBP10.08□□□□□ -0.8
GPCPD1-201ENST00000379019 E9PCH4 1651 aa10.08□□□□□ -0.8
GPCPD1-201ENST00000379019 ANKRD30BQ9BXX2 1392 aa10.08□□□□□ -0.8
GPCPD1-201ENST00000379019 NCOA3Q9Y6Q9 1424 aa10.07□□□□□ -0.8
GPCPD1-201ENST00000379019 PIK3R4Q99570 1358 aa10.07□□□□□ -0.8
GPCPD1-201ENST00000379019 NPHP4O75161 1426 aaPredicted RBP10.07□□□□□ -0.8
GPCPD1-201ENST00000379019 ZBED9Q6R2W3 1325 aa10.06□□□□□ -0.8
GPCPD1-201ENST00000379019 EID1Q9Y6B2 187 aa10.06□□□□□ -0.8
GPCPD1-201ENST00000379019 NEFLP07196 543 aa10.06□□□□□ -0.8
GPCPD1-201ENST00000379019 NOP58Q9Y2X3 529 aaKnown RBP10.06□□□□□ -0.8
GPCPD1-201ENST00000379019 RPGRIP1LQ68CZ1 1315 aa10.05□□□□□ -0.8
GPCPD1-201ENST00000379019 NWD1Q149M9 1564 aa10.05□□□□□ -0.8
GPCPD1-201ENST00000379019 STAC3Q96MF2 364 aa10.05□□□□□ -0.8
GPCPD1-201ENST00000379019 TMEM2Q9UHN6 1383 aa10.05□□□□□ -0.8
GPCPD1-201ENST00000379019 PNISRQ8TF01 805 aaKnown RBP10.05□□□□□ -0.8
GPCPD1-201ENST00000379019 TMEM131LA2VDJ0 1609 aa10.05□□□□□ -0.8
GPCPD1-201ENST00000379019 NKTRP30414 1462 aaKnown RBP10.04□□□□□ -0.8
GPCPD1-201ENST00000379019 LTBP4Q8N2S1 1624 aa10.04□□□□□ -0.8
GPCPD1-201ENST00000379019 CEBPAP49715 358 aaPredicted RBP10.04□□□□□ -0.8
GPCPD1-201ENST00000379019 NUP155O75694 1391 aa10.04□□□□□ -0.8
GPCPD1-201ENST00000379019 DCAF11Q8TEB1 546 aa10.04□□□□□ -0.8
GPCPD1-201ENST00000379019 ZFYVE9O95405 1425 aa10.04□□□□□ -0.8
GPCPD1-201ENST00000379019 NPM2Q86SE8 214 aaKnown RBP10.03□□□□□ -0.8
GPCPD1-201ENST00000379019 PLEKHG1Q9ULL1 1385 aa10.03□□□□□ -0.8
GPCPD1-201ENST00000379019 POLR3GLQ9BT43 218 aa10.03□□□□□ -0.8
GPCPD1-201ENST00000379019 PRAG1Q86YV5 1406 aa10.03□□□□□ -0.8
GPCPD1-201ENST00000379019 FBXO41Q8TF61 875 aa10.03□□□□□ -0.8
GPCPD1-201ENST00000379019 ZNF326Q5BKZ1 582 aaKnown RBP10.01□□□□□ -0.81
GPCPD1-201ENST00000379019 KIF1BO60333 1816 aa10.01□□□□□ -0.81
GPCPD1-201ENST00000379019 SETBP1Q9Y6X0 1596 aa10.01□□□□□ -0.81
GPCPD1-201ENST00000379019 EIF4G2P78344 907 aaKnown RBP eCLIP10□□□□□ -0.814e-6■■■□□ 16
GPCPD1-201ENST00000379019 CERKQ8TCT0 537 aa9.99□□□□□ -0.81
GPCPD1-201ENST00000379019 SPINK5Q9NQ38 1064 aaPredicted RBP9.99□□□□□ -0.81
GPCPD1-201ENST00000379019 SMG6Q86US8 1419 aaKnown RBP9.99□□□□□ -0.81
GPCPD1-201ENST00000379019 RIMS2Q9UQ26 1411 aa9.98□□□□□ -0.81
GPCPD1-201ENST00000379019 IPO9Q96P70 1041 aaKnown RBP9.98□□□□□ -0.81
GPCPD1-201ENST00000379019 STAG3Q9UJ98 1225 aa9.98□□□□□ -0.81
GPCPD1-201ENST00000379019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.98□□□□□ -0.818e-7■■■■□ 21.6
GPCPD1-201ENST00000379019 LAMC1P11047 1609 aa9.98□□□□□ -0.81
GPCPD1-201ENST00000379019 FBXO31Q5XUX0 539 aaPredicted RBP9.97□□□□□ -0.81
GPCPD1-201ENST00000379019 TIMELESSQ9UNS1 1208 aa9.97□□□□□ -0.81
GPCPD1-201ENST00000379019 NBPF1Q3BBV0 1214 aa9.97□□□□□ -0.81
GPCPD1-201ENST00000379019 SEC24BO95487 1268 aa9.96□□□□□ -0.81
GPCPD1-201ENST00000379019 UTRNP46939 3433 aa9.96□□□□□ -0.82
GPCPD1-201ENST00000379019 CLTCL1P53675 1640 aa9.95□□□□□ -0.82
GPCPD1-201ENST00000379019 HSPA2P54652 639 aa9.95□□□□□ -0.82
GPCPD1-201ENST00000379019 TBX22Q9Y458 520 aa9.95□□□□□ -0.82
GPCPD1-201ENST00000379019 LRPPRCP42704 1394 aaKnown RBP9.95□□□□□ -0.82
GPCPD1-201ENST00000379019 ST20-MTHFSA0A0A6YYL1 179 aa9.94□□□□□ -0.82
GPCPD1-201ENST00000379019 NUDCQ9Y266 331 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms