RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 CCDC73Q6ZRK6 1079 aa13.78□□□□□ -0.2
ITM2B-202ENST00000378565 RBM10P98175 930 aaKnown RBP13.77□□□□□ -0.2
ITM2B-202ENST00000378565 RB1CC1Q8TDY2 1594 aa13.77□□□□□ -0.2
ITM2B-202ENST00000378565 NEXNQ0ZGT2 675 aa13.77□□□□□ -0.2
ITM2B-202ENST00000378565 CT47B1P0C2W7 299 aaPredicted RBP13.77□□□□□ -0.21
ITM2B-202ENST00000378565 MYBBP1AQ9BQG0 1328 aaKnown RBP13.76□□□□□ -0.21
ITM2B-202ENST00000378565 RAB3GAP2Q9H2M9 1393 aa13.76□□□□□ -0.21
ITM2B-202ENST00000378565 SYNE3Q6ZMZ3 975 aa13.75□□□□□ -0.21
ITM2B-202ENST00000378565 VPS8Q8N3P4 1428 aa13.75□□□□□ -0.21
ITM2B-202ENST00000378565 CT47A1Q5JQC4 288 aaPredicted RBP13.75□□□□□ -0.21
ITM2B-202ENST00000378565 CCDC146Q8IYE0 955 aa13.75□□□□□ -0.21
ITM2B-202ENST00000378565 TRIM5Q9C035 493 aa13.75□□□□□ -0.21
ITM2B-202ENST00000378565 DHX8Q14562 1220 aaKnown RBP13.75□□□□□ -0.21
ITM2B-202ENST00000378565 OLFM4Q6UX06 510 aa13.75□□□□□ -0.21
ITM2B-202ENST00000378565 BCL11BQ9C0K0 894 aaPredicted RBP13.75□□□□□ -0.21
ITM2B-202ENST00000378565 UQCRHLA0A096LP55 91 aa13.75□□□□□ -0.21
ITM2B-202ENST00000378565 EIF3JO75822 258 aaKnown RBP13.75□□□□□ -0.21
ITM2B-202ENST00000378565 UQCRHP07919 91 aa13.75□□□□□ -0.21
ITM2B-202ENST00000378565 MBD3O95983 291 aa13.74□□□□□ -0.21
ITM2B-202ENST00000378565 IL27Q8NEV9 243 aa13.74□□□□□ -0.21
ITM2B-202ENST00000378565 ROCK1Q13464 1354 aa13.74□□□□□ -0.21
ITM2B-202ENST00000378565 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.74□□□□□ -0.21
ITM2B-202ENST00000378565 CPLX1O14810 134 aa13.74□□□□□ -0.21
ITM2B-202ENST00000378565 RNF20Q5VTR2 975 aa13.74□□□□□ -0.21
ITM2B-202ENST00000378565 VPS37CA5D8V6 355 aaPredicted RBP13.73□□□□□ -0.21
ITM2B-202ENST00000378565 E9PSI1 815 aa13.73□□□□□ -0.21
ITM2B-202ENST00000378565 ZKSCAN2Q63HK3 967 aa13.73□□□□□ -0.21
ITM2B-202ENST00000378565 CRBNQ96SW2 442 aa13.73□□□□□ -0.21
ITM2B-202ENST00000378565 TRAK2O60296 914 aa13.73□□□□□ -0.21
ITM2B-202ENST00000378565 ODF2Q5BJF6 829 aa13.73□□□□□ -0.21
ITM2B-202ENST00000378565 TCEAL9Q9UHQ7 104 aa13.73□□□□□ -0.21
ITM2B-202ENST00000378565 SMC3Q9UQE7 1217 aa13.73□□□□□ -0.21
ITM2B-202ENST00000378565 TMX4Q9H1E5 349 aaPredicted RBP13.73□□□□□ -0.21
ITM2B-202ENST00000378565 CAVIN1Q6NZI2 390 aaKnown RBP13.72□□□□□ -0.21
ITM2B-202ENST00000378565 FBXW7Q969H0 707 aa13.72□□□□□ -0.21
ITM2B-202ENST00000378565 C22orf23Q9BZE7 217 aa13.72□□□□□ -0.21
ITM2B-202ENST00000378565 TSPY26PQ9H489 355 aa13.72□□□□□ -0.21
ITM2B-202ENST00000378565 ANO2Q9NQ90 1003 aa13.72□□□□□ -0.21
ITM2B-202ENST00000378565 EXOC6Q8TAG9 804 aa13.72□□□□□ -0.21
ITM2B-202ENST00000378565 KIF7Q2M1P5 1343 aa13.72□□□□□ -0.21
ITM2B-202ENST00000378565 PDILTQ8N807 584 aa13.72□□□□□ -0.21
ITM2B-202ENST00000378565 ZNF330Q9Y3S2 320 aaPredicted RBP13.72□□□□□ -0.21
ITM2B-202ENST00000378565 BAZ1BQ9UIG0 1483 aaKnown RBP13.72□□□□□ -0.21
ITM2B-202ENST00000378565 EPS15P42566 896 aa13.72□□□□□ -0.21
ITM2B-202ENST00000378565 DDX19BQ9UMR2 479 aa13.71□□□□□ -0.21
ITM2B-202ENST00000378565 SAFB2Q14151 953 aaKnown RBP eCLIP13.71□□□□□ -0.21
ITM2B-202ENST00000378565 INTS3Q68E01 1043 aaKnown RBP13.71□□□□□ -0.21
ITM2B-202ENST00000378565 PLIN1O60240 522 aa13.71□□□□□ -0.21
ITM2B-202ENST00000378565 HSP90AB2PQ58FF8 381 aa13.71□□□□□ -0.22
ITM2B-202ENST00000378565 GIMAP7Q8NHV1 300 aa13.71□□□□□ -0.22
ITM2B-202ENST00000378565 MAPK8IP2Q13387 824 aaPredicted RBP13.71□□□□□ -0.22
ITM2B-202ENST00000378565 ERLIN1O75477 346 aa13.7□□□□□ -0.22
ITM2B-202ENST00000378565 HDGFP51858 240 aaKnown RBP13.7□□□□□ -0.22
ITM2B-202ENST00000378565 ERLIN2O94905 339 aa13.7□□□□□ -0.22
ITM2B-202ENST00000378565 RNF214Q8ND24 703 aa13.7□□□□□ -0.22
ITM2B-202ENST00000378565 CCDC112Q8NEF3 446 aa13.7□□□□□ -0.22
ITM2B-202ENST00000378565 SMARCE1Q969G3 411 aa13.69□□□□□ -0.22
ITM2B-202ENST00000378565 EIF4G1Q04637 1599 aaKnown RBP13.69□□□□□ -0.22
ITM2B-202ENST00000378565 FMN1Q68DA7 1419 aa13.69□□□□□ -0.22
ITM2B-202ENST00000378565 WWC1Q8IX03 1113 aa13.69□□□□□ -0.22
ITM2B-202ENST00000378565 TERF2IPQ9NYB0 399 aa13.69□□□□□ -0.22
ITM2B-202ENST00000378565 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.69□□□□□ -0.22
ITM2B-202ENST00000378565 ERICH4A6NGS2 130 aa13.68□□□□□ -0.22
ITM2B-202ENST00000378565 SKIDA1Q1XH10 827 aa13.68□□□□□ -0.22
ITM2B-202ENST00000378565 OFD1O75665 1012 aa13.68□□□□□ -0.22
ITM2B-202ENST00000378565 KINO60870 393 aaKnown RBP13.68□□□□□ -0.22
ITM2B-202ENST00000378565 SMC2O95347 1197 aa13.68□□□□□ -0.22
ITM2B-202ENST00000378565 AAMPQ13685 434 aa13.68□□□□□ -0.22
ITM2B-202ENST00000378565 NEFHP12036 1026 aa13.68□□□□□ -0.22
ITM2B-202ENST00000378565 TTLL5Q6EMB2 1281 aa13.67□□□□□ -0.22
ITM2B-202ENST00000378565 IQCEQ6IPM2 695 aa13.67□□□□□ -0.22
ITM2B-202ENST00000378565 SAFBQ15424 915 aaKnown RBP eCLIP13.67□□□□□ -0.22
ITM2B-202ENST00000378565 SDF4Q9BRK5 362 aa13.67□□□□□ -0.22
ITM2B-202ENST00000378565 PKD2Q13563 968 aa13.67□□□□□ -0.22
ITM2B-202ENST00000378565 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.66□□□□□ -0.22
ITM2B-202ENST00000378565 PDCL2Q8N4E4 241 aa13.66□□□□□ -0.22
ITM2B-202ENST00000378565 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.66□□□□□ -0.22
ITM2B-202ENST00000378565 ENOX2Q16206 610 aaKnown RBP13.66□□□□□ -0.22
ITM2B-202ENST00000378565 FRAT2O75474 233 aaPredicted RBP13.65□□□□□ -0.22
ITM2B-202ENST00000378565 TRDNQ13061 729 aa13.65□□□□□ -0.22
ITM2B-202ENST00000378565 COG6Q9Y2V7 657 aa13.65□□□□□ -0.22
ITM2B-202ENST00000378565 DDX11Q96FC9 970 aa13.64□□□□□ -0.23
ITM2B-202ENST00000378565 RABEP1Q15276 862 aa13.64□□□□□ -0.23
ITM2B-202ENST00000378565 FOXD1Q16676 465 aa13.64□□□□□ -0.23
ITM2B-202ENST00000378565 CALCOCO1Q9P1Z2 691 aa13.64□□□□□ -0.23
ITM2B-202ENST00000378565 PDCP20941 246 aa13.64□□□□□ -0.23
ITM2B-202ENST00000378565 CLASRPQ8N2M8 674 aaKnown RBP13.64□□□□□ -0.23
ITM2B-202ENST00000378565 LRRCC1Q9C099 1032 aa13.64□□□□□ -0.23
ITM2B-202ENST00000378565 ESPNB1AK53 854 aa13.64□□□□□ -0.23
ITM2B-202ENST00000378565 MEX3CQ5U5Q3 659 aaKnown RBP13.63□□□□□ -0.23
ITM2B-202ENST00000378565 BCL2L13Q9BXK5 485 aa13.63□□□□□ -0.23
ITM2B-202ENST00000378565 SPC24Q8NBT2 197 aa13.63□□□□□ -0.23
ITM2B-202ENST00000378565 CENPHQ9H3R5 247 aa13.63□□□□□ -0.23
ITM2B-202ENST00000378565 GRPEL1Q9HAV7 217 aa13.63□□□□□ -0.23
ITM2B-202ENST00000378565 SEPT7Q16181 437 aaKnown RBP13.63□□□□□ -0.23
ITM2B-202ENST00000378565 ANKRD18AQ8IVF6 992 aa13.63□□□□□ -0.23
ITM2B-202ENST00000378565 CCDC192P0DO97 292 aa13.63□□□□□ -0.23
ITM2B-202ENST00000378565 AMOTL1Q8IY63 956 aa13.63□□□□□ -0.23
ITM2B-202ENST00000378565 BAZ1AQ9NRL2 1556 aaPredicted RBP13.63□□□□□ -0.23
ITM2B-202ENST00000378565 EZRP15311 586 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms