RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 TMEM2Q9UHN6 1383 aa30.77■■■□□ 2.52
CBWD3-202ENST00000377342 ZNF326Q5BKZ1 582 aaKnown RBP30.77■■■□□ 2.52
CBWD3-202ENST00000377342 RIMS2Q9UQ26 1411 aa30.76■■■□□ 2.52
CBWD3-202ENST00000377342 RPGRIP1LQ68CZ1 1315 aa30.73■■■□□ 2.51
CBWD3-202ENST00000377342 NRXN1Q9ULB1 1477 aa30.73■■■□□ 2.51
CBWD3-202ENST00000377342 DCAF11Q8TEB1 546 aa30.72■■■□□ 2.51
CBWD3-202ENST00000377342 POLR1AO95602 1720 aaPredicted RBP30.71■■■□□ 2.51
CBWD3-202ENST00000377342 THEMISQ8N1K5 641 aaPredicted RBP30.71■■■□□ 2.51
CBWD3-202ENST00000377342 PRAG1Q86YV5 1406 aa30.68■■■□□ 2.5
CBWD3-202ENST00000377342 NRXN3Q9Y4C0 1643 aa30.66■■■□□ 2.5
CBWD3-202ENST00000377342 SCAF11Q99590 1463 aaKnown RBP30.66■■■□□ 2.5
CBWD3-202ENST00000377342 NUTM2DQ5VT03 806 aaPredicted RBP30.66■■■□□ 2.5
CBWD3-202ENST00000377342 ADGRF5Q8IZF2 1346 aa30.65■■■□□ 2.5
CBWD3-202ENST00000377342 KDM2AQ9Y2K7 1162 aa30.65■■■□□ 2.5
CBWD3-202ENST00000377342 IQGAP1P46940 1657 aa30.65■■■□□ 2.5
CBWD3-202ENST00000377342 PIK3C2GO75747 1445 aa30.65■■■□□ 2.5
CBWD3-202ENST00000377342 TRPM1Q7Z4N2 1603 aa30.63■■■□□ 2.49
CBWD3-202ENST00000377342 PPP1R15AO75807 674 aaPredicted RBP30.63■■■□□ 2.49
CBWD3-202ENST00000377342 LTKP29376 864 aa30.63■■■□□ 2.49
CBWD3-202ENST00000377342 ZEB1P37275 1124 aaPredicted RBP30.62■■■□□ 2.49
CBWD3-202ENST00000377342 SETBP1Q9Y6X0 1596 aa30.61■■■□□ 2.49
CBWD3-202ENST00000377342 SETD1AO15047 1707 aaKnown RBP30.61■■■□□ 2.49
CBWD3-202ENST00000377342 KIAA1210Q9ULL0 1709 aa30.61■■■□□ 2.49
CBWD3-202ENST00000377342 NBPF8Q3BBV2 869 aa30.6■■■□□ 2.49
CBWD3-202ENST00000377342 STAC3Q96MF2 364 aa30.6■■■□□ 2.49
CBWD3-202ENST00000377342 HSPA2P54652 639 aa30.59■■■□□ 2.49
CBWD3-202ENST00000377342 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.59■■■□□ 2.49
CBWD3-202ENST00000377342 LAMC1P11047 1609 aa30.58■■■□□ 2.49
CBWD3-202ENST00000377342 VGFO15240 615 aaPredicted RBP30.58■■■□□ 2.49
CBWD3-202ENST00000377342 STRCQ7RTU9 1775 aa30.58■■■□□ 2.49
CBWD3-202ENST00000377342 PLEKHG1Q9ULL1 1385 aa30.57■■■□□ 2.48
CBWD3-202ENST00000377342 TXNDC2Q86VQ3 553 aa30.57■■■□□ 2.48
CBWD3-202ENST00000377342 EID1Q9Y6B2 187 aa30.55■■■□□ 2.48
CBWD3-202ENST00000377342 RALGAPBQ86X10 1494 aa30.54■■■□□ 2.48
CBWD3-202ENST00000377342 MED14O60244 1454 aa30.54■■■□□ 2.48
CBWD3-202ENST00000377342 ALKQ9UM73 1620 aa30.53■■■□□ 2.48
CBWD3-202ENST00000377342 HDGFP51858 240 aaKnown RBP30.52■■■□□ 2.48
CBWD3-202ENST00000377342 ASXL1Q8IXJ9 1541 aa30.52■■■□□ 2.48
CBWD3-202ENST00000377342 ANKLE2Q86XL3 938 aa30.52■■■□□ 2.48
CBWD3-202ENST00000377342 ADAMTS13Q76LX8 1427 aa30.51■■■□□ 2.47
CBWD3-202ENST00000377342 SENP3Q9H4L4 574 aaPredicted RBP30.49■■■□□ 2.47
CBWD3-202ENST00000377342 DIP2AQ14689 1571 aa30.48■■■□□ 2.47
CBWD3-202ENST00000377342 ADGRB1O14514 1584 aa30.48■■■□□ 2.47
CBWD3-202ENST00000377342 NPHP4O75161 1426 aaPredicted RBP30.47■■■□□ 2.47
CBWD3-202ENST00000377342 NCKAP5LQ9HCH0 1330 aa30.47■■■□□ 2.47
CBWD3-202ENST00000377342 CFAP70Q5T0N1 1121 aa30.44■■■□□ 2.46
CBWD3-202ENST00000377342 C14orf93Q9H972 538 aaKnown RBP30.43■■■□□ 2.46
CBWD3-202ENST00000377342 GPRASP1Q5JY77 1395 aa30.41■■■□□ 2.46
CBWD3-202ENST00000377342 NBPF1Q3BBV0 1214 aa30.4■■■□□ 2.46
CBWD3-202ENST00000377342 AEBP2Q6ZN18 517 aaPredicted RBP30.39■■■□□ 2.45
CBWD3-202ENST00000377342 ROCK2O75116 1388 aaKnown RBP30.39■■■□□ 2.45
CBWD3-202ENST00000377342 METP08581 1390 aa30.36■■■□□ 2.45
CBWD3-202ENST00000377342 SLC26A8Q96RN1 970 aa30.36■■■□□ 2.45
CBWD3-202ENST00000377342 BCANQ96GW7 911 aa30.35■■■□□ 2.45
CBWD3-202ENST00000377342 KNDC1Q76NI1 1749 aa30.34■■■□□ 2.45
CBWD3-202ENST00000377342 XRN1Q8IZH2 1706 aaKnown RBP30.33■■■□□ 2.45
CBWD3-202ENST00000377342 CHD2O14647 1828 aaKnown RBP30.32■■■□□ 2.44
CBWD3-202ENST00000377342 ARHGEF28Q8N1W1 1705 aaKnown RBP30.31■■■□□ 2.44
CBWD3-202ENST00000377342 TMEM132EQ6IEE7 984 aa30.31■■■□□ 2.44
CBWD3-202ENST00000377342 TBX22Q9Y458 520 aa30.31■■■□□ 2.44
CBWD3-202ENST00000377342 PTPRUQ92729 1446 aa30.29■■■□□ 2.44
CBWD3-202ENST00000377342 YTHDC2Q9H6S0 1430 aaKnown RBP30.29■■■□□ 2.44
CBWD3-202ENST00000377342 NWD1Q149M9 1564 aa30.27■■■□□ 2.44
CBWD3-202ENST00000377342 CARD11Q9BXL7 1154 aa30.27■■■□□ 2.44
CBWD3-202ENST00000377342 PIK3R4Q99570 1358 aa30.26■■■□□ 2.43
CBWD3-202ENST00000377342 CPS1P31327 1500 aa30.25■■■□□ 2.43
CBWD3-202ENST00000377342 LRPPRCP42704 1394 aaKnown RBP30.25■■■□□ 2.43
CBWD3-202ENST00000377342 STRCP1A6NGW2 1772 aa30.25■■■□□ 2.43
CBWD3-202ENST00000377342 TECPR2O15040 1411 aa30.23■■■□□ 2.43
CBWD3-202ENST00000377342 DLC1Q96QB1 1528 aa30.22■■■□□ 2.43
CBWD3-202ENST00000377342 USP47Q96K76 1375 aa30.22■■■□□ 2.43
CBWD3-202ENST00000377342 ABCC11Q96J66 1382 aa30.18■■■□□ 2.42
CBWD3-202ENST00000377342 QRICH2Q9H0J4 1663 aa30.16■■■□□ 2.42
CBWD3-202ENST00000377342 STK26Q9P289 416 aa30.16■■■□□ 2.42
CBWD3-202ENST00000377342 PTCH1Q13635 1447 aa30.16■■■□□ 2.42
CBWD3-202ENST00000377342 TRAK1Q9UPV9 953 aa30.15■■■□□ 2.42
CBWD3-202ENST00000377342 ROBO2Q9HCK4 1378 aa30.13■■■□□ 2.41
CBWD3-202ENST00000377342 AMOTL2Q9Y2J4 779 aa30.13■■■□□ 2.41
CBWD3-202ENST00000377342 DMRT2Q9Y5R5 561 aa30.13■■■□□ 2.41
CBWD3-202ENST00000377342 NKTRP30414 1462 aaKnown RBP30.12■■■□□ 2.41
CBWD3-202ENST00000377342 EIF3AQ14152 1382 aaKnown RBP30.11■■■□□ 2.41
CBWD3-202ENST00000377342 FAM135BQ49AJ0 1406 aa30.1■■■□□ 2.41
CBWD3-202ENST00000377342 KCNA6P17658 529 aa30.1■■■□□ 2.41
CBWD3-202ENST00000377342 HSPA5P11021 654 aaKnown RBP30.09■■■□□ 2.41
CBWD3-202ENST00000377342 EIF4G2P78344 907 aaKnown RBP eCLIP30.09■■■□□ 2.41
CBWD3-202ENST00000377342 PLEKHH1Q9ULM0 1364 aa30.09■■■□□ 2.41
CBWD3-202ENST00000377342 ZNF335Q9H4Z2 1342 aaPredicted RBP30.06■■■□□ 2.4
CBWD3-202ENST00000377342 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.06■■■□□ 2.4
CBWD3-202ENST00000377342 ST20-MTHFSA0A0A6YYL1 179 aa30.04■■■□□ 2.4
CBWD3-202ENST00000377342 CENPJQ9HC77 1338 aaPredicted RBP30.04■■■□□ 2.4
CBWD3-202ENST00000377342 NALCNQ8IZF0 1738 aa30.04■■■□□ 2.4
CBWD3-202ENST00000377342 PRAM1Q96QH2 718 aa30.04■■■□□ 2.4
CBWD3-202ENST00000377342 XIRP1Q702N8 1843 aaKnown RBP30.04■■■□□ 2.4
CBWD3-202ENST00000377342 SIRT1Q96EB6 747 aa30.03■■■□□ 2.4
CBWD3-202ENST00000377342 HIRIP3Q9BW71 556 aaPredicted RBP30.02■■■□□ 2.4
CBWD3-202ENST00000377342 WAPLQ7Z5K2 1190 aa30.01■■■□□ 2.4
CBWD3-202ENST00000377342 SBNO2Q9Y2G9 1366 aa30.01■■■□□ 2.39
CBWD3-202ENST00000377342 ADGRB2O60241 1585 aa30■■■□□ 2.39
CBWD3-202ENST00000377342 TESK2Q96S53 571 aa30■■■□□ 2.39
CBWD3-202ENST00000377342 LTBP4Q8N2S1 1624 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 431.6 ms